Os01g0271200

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Revision as of 04:34, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0271200| Description = Similar to Glutamyl-tRNA synthetase| Version = NM_001049241.1 GI:115435895 GeneID:4325167| Length = 4445 bp| Defini...")
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Gene Name

Os01g0271200

Description

Similar to Glutamyl-tRNA synthetase

Version

NM_001049241.1 GI:115435895 GeneID:4325167

Length

4445 bp

Definition

Oryza sativa Japonica Group Os01g0271200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:9372712..9377156

Sequence Coding Region

9372859..9373077,9373794..9374258,9374352..9375427,9375514..9375667,9375763..9375859
,9376218..9376354

Expression

GEO Profiles:Os01g0271200

Genome Context

<gbrowseImage1> name=NC_008394:9372712..9377156 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:9372712..9377156 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagccgaaactagcattcccccaggatagtccaccacttgccatcctctgtgctgctaaggtcgcaggtgtttccctcaccctcgatccgaagctcgcctcgggttcagcacccacacttcaccttggttctggggattttatccacggtgttaacacaattcttcgttacattgctcgtgttgcatctgttaccagtttctatggtcaggatgctattcaggcagcatatgttgatcaatggctcgactacgccccagtcattctttcaggatctgaatttgaagctgcttgctcatttctagatggatacctagcatcacgaacctttttggttagttatggcttgtcaattgctgacattgtagtatggtcaaatcttgcagggacaggccaacgatgggaaagtctaaggaggtccaagaaatatcaaaaccttgttcgctggttcaacagcatagcagactattcagacacactagatgaagttgtctctgcttatgttggaaaaagggggataggaaagtctcctgcaccaagcctgaaagagaaattacctgattcaaagcagaatatctcaatccctgaagtagatctcccaggtgcaaaagttggggaggtctgcgttcgctttgcccccgagcctagtgggtatcttcacattggtcatgcaaaggctggacttttgaacaagtactttgctgagagatataaagggcgcctgatagttcgatttgatgacacaaacccttcgaaagaaagcaatgaatttgttgagaacgtcctgaaggatgtagaaacactgggaataaaatatgatatagttacttacacatcagattattttccgcagttaatggaaatggctgaaaatttgattaagcaagggaaggcttatgttgatgatacaccaaaggagcaaatgaggagtgagagaatggatggtgtggaatctaaatgtagaaataatactgttcaggataatttgtcattgtggaaagagatgatcaatggaactgaaaggggtatgcagtgttgtgtacggggtaaacttgacatgcaggaccctaacaaatcacttcgagatcctgtatactaccgttgcaacactgatccccatcatcgtattggctcaaaatacaaggtctatccaacttatgactttgcttgtccatttgtcgacgcattggaaggagtgactcatgctctccgctcaagtgaataccatgatcggaatgcacagtactatcgtatccttcaagaaatggggttaaggagggtagaaatctatgagttcagcaggttgaatatggtttacacggttcttagcaaacgcaagcttctctggtttgtacaaaacaaaaaggtggaggactggactgatccacgcttccccactgtacaaggcatagtacgtcgtggcttgaaggttgaagctttggtacaatttatacttgagcagggtgcctctaaaaatctaaatcttatggagtgggataaactctggacaatcaacaagaagataattgatccagtgtgtggaaggcatactgccgttctgaaagaccagcgtgtgcttttcactcttactaatggtccagaggaaccattcatccgagtcttacccaggcacaagaaatacgaaggtgctggaaagaaggctacaaccttcacaaacaaaatttggttggagagtgctgatgcatcagttattagcatcggtgaggaagttactctgatggactggggaaatgctatcatcaaagaaatcaagacacagaatggaattataactgaactgcttggggaactccatcttgaggggtcagttaagatgacaaagttaaagctaacgtggctgccagatattgaagatcttgtatctctctcgttggtagagtttgactacctaatcaaaaagaaaaagctggaagaagatgataatttccttgacaatcttaatccatgcacttgccaagagtttccggctcttggagacgcaaacatgcggaatctcaaacaaggagaaatcatacagcttgaaaggaaagggtattacaggtgtgatgctccatttatccggtcttccaaaccaattgtccttttcgctattccagatggacgacaaaagtccgcaacgaagtag</cdnaseq>

Protein Sequence

<aaseq>MEPKLAFPQDSPPLAILCAAKVAGVSLTLDPKLASGSAPTLHLG SGDFIHGVNTILRYIARVASVTSFYGQDAIQAAYVDQWLDYAPVILSGSEFEAACSFL DGYLASRTFLVSYGLSIADIVVWSNLAGTGQRWESLRRSKKYQNLVRWFNSIADYSDT LDEVVSAYVGKRGIGKSPAPSLKEKLPDSKQNISIPEVDLPGAKVGEVCVRFAPEPSG YLHIGHAKAGLLNKYFAERYKGRLIVRFDDTNPSKESNEFVENVLKDVETLGIKYDIV TYTSDYFPQLMEMAENLIKQGKAYVDDTPKEQMRSERMDGVESKCRNNTVQDNLSLWK EMINGTERGMQCCVRGKLDMQDPNKSLRDPVYYRCNTDPHHRIGSKYKVYPTYDFACP FVDALEGVTHALRSSEYHDRNAQYYRILQEMGLRRVEIYEFSRLNMVYTVLSKRKLLW FVQNKKVEDWTDPRFPTVQGIVRRGLKVEALVQFILEQGASKNLNLMEWDKLWTINKK IIDPVCGRHTAVLKDQRVLFTLTNGPEEPFIRVLPRHKKYEGAGKKATTFTNKIWLES ADASVISIGEEVTLMDWGNAIIKEIKTQNGIITELLGELHLEGSVKMTKLKLTWLPDI EDLVSLSLVEFDYLIKKKKLEEDDNFLDNLNPCTCQEFPALGDANMRNLKQGEIIQLE RKGYYRCDAPFIRSSKPIVLFAIPDGRQKSATK</aaseq>

Gene Sequence

<dnaseqindica>4080..4298#2899..3363#1730..2805#1490..1643#1298..1394#803..939#gccgcgctctgctcttccctccccctcccccgagaggccgagagacccgcctgcctgcctccccctcgccggcggcgcgcccgccccgtcgccctcgcccgccgcgccggcatccactgtgagtcgctttgttgatctcagccttgagcccttgacccttctttaccgtgggaacaaccgacttacaagctgcggggcgccccccctagttaagcgaggtttcggccttcgcgcgattttggccggcggcgcggggtataggggacccggacccgatgcgatgcgatgaggtgctgcggccctcggggattacgtgctgctagttagtagtagcttccttccaattccatcgaggcttttgggggcagtgagcattctgttggccagttcgttttgctcaccgtctgatgcttcaaatcaagttttgagtaatcgacttgtttgggtagtatcctggaattttatttttggttttagggaacatgtaaattctactgctcatgtggtactcttttgaggttgctatcataaccccaatctttagaggttgctgtcataacccccagctgactgcattcttatcagatgttcagtttgttgaaaatgacgtaattttgaaaggatgtttatttattttgatttttgagttagaaggctggaattttatatctttgctaaaattgctcgtataaggactcgatgagtaagtgcatactggtttatttagctgatgtaaattgtacagcttacaacattttaatttgtaggttccctctctttgagaggacttgcaaggagctgaatggagccgaaactagcattcccccaggatagtccaccacttgccatcctctgtgctgctaaggtcgcaggtgtttccctcaccctcgatccgaagctcgcctcgggttcagcacccacacttcaccttggttctgggtaagtggatactgatcagtctgtagcttctctctgagacgaaccactacttttttttccctttcttttaaggcttatactatgataatttgctccatcatcatgcctgcatcttgaatcgtgcttggaatggcaagttcggtgcataatattctattccatagtagggtttgacaaagcaaccttcagcattatttttttctttatgtcattctagtcttcatggaacatcaaaacaatatttttggtggccaaattattgctcctcttttccattagtatttatccttctcagtatttcccctttagagtttaaaaattctcactgaacatctgaacctttcatgattctgtgcagggattttatccacggtgttaacacaattcttcgttacattgctcgtgttgcatctgttaccagtttctatggtcaggatgctattcaggcagcatatgtatgttctggttgactatttgctatcgctggtgctactcagtgaatttattgattgtctgagtattcatagttcctgttattatgcatgtttaggttgatcaatggctcgactacgccccagtcattctttcaggatctgaatttgaagctgcttgctcatttctagatggatacctagcatcacgaacctttttggttagttatggcttgtcaattgctgacattgtagtatggtcaaatcttgcaggtaattgtctggtttcttttataatctatattttatcattctatatgtttatattacttactttggagtggcacccctttatttagggacaggccaacgatgggaaagtctaaggaggtccaagaaatatcaaaaccttgttcgctggttcaacagcatagcagactattcagacacactagatgaagttgtctctgcttatgttggaaaaagggggataggaaagtctcctgcaccaagcctgaaagagaaattacctgattcaaagcagaatatctcaatccctgaagtagatctcccaggtgcaaaagttggggaggtctgcgttcgctttgcccccgagcctagtgggtatcttcacattggtcatgcaaaggctggacttttgaacaagtactttgctgagagatataaagggcgcctgatagttcgatttgatgacacaaacccttcgaaagaaagcaatgaatttgttgagaacgtcctgaaggatgtagaaacactgggaataaaatatgatatagttacttacacatcagattattttccgcagttaatggaaatggctgaaaatttgattaagcaagggaaggcttatgttgatgatacaccaaaggagcaaatgaggagtgagagaatggatggtgtggaatctaaatgtagaaataatactgttcaggataatttgtcattgtggaaagagatgatcaatggaactgaaaggggtatgcagtgttgtgtacggggtaaacttgacatgcaggaccctaacaaatcacttcgagatcctgtatactaccgttgcaacactgatccccatcatcgtattggctcaaaatacaaggtctatccaacttatgactttgcttgtccatttgtcgacgcattggaaggagtgactcatgctctccgctcaagtgaataccatgatcggaatgcacagtactatcgtatccttcaagaaatggggttaaggagggtagaaatctatgagttcagcaggttgaatatggtttacacggttcttagcaaacgcaagcttctctggtttgtacaaaacaaaaaggtggaggactggactgatccacgcttccccactgtacaaggcatagtacgtcgtggcttgaaggttgaagctttggtacaatttatacttgagcaggtaatgttctaatgagttaccgtttgtgatttcatagctatatttaatggtgtcttcgtaattcatttgttctttgaccttttatttctcaagggtgcctctaaaaatctaaatcttatggagtgggataaactctggacaatcaacaagaagataattgatccagtgtgtggaaggcatactgccgttctgaaagaccagcgtgtgcttttcactcttactaatggtccagaggaaccattcatccgagtcttacccaggcacaagaaatacgaaggtgctggaaagaaggctacaaccttcacaaacaaaatttggttggagagtgctgatgcatcagttattagcatcggtgaggaagttactctgatggactggggaaatgctatcatcaaagaaatcaagacacagaatggaattataactgaactgcttggggaactccatcttgaggggtcagttaagatgacaaagttaaagctaacgtggctgccagatattgaagatcttgtatctctctcgttggtagagtttgactacctaatcaaaaagaaaaaggtaacacgttaaattgaagttcctttattaagtagtaggctagtatcgtacagatgcaataccacatgagaaacagagttcttatagtactgaacaattggtactctactgcttttgctataattttgtagtattaatacctaattaggccctctttgaatcaaaggaaaaaccataggaattttagaggattttatcatatggaaaataatcctatctagtccttttgaaacaaaggattgtttcctatcaattcctttgaaattcctatgaaatggaccttcctagagtaattttgaaggaaaataagcatgaggtttcacctcatgtttttctcttcatgtgtctaagtttcttgcgtttttcctgtatgctaatcaaacgatagttttgagactttcctatgtttcaaaatcccagaggaggcccttagtctgttaagtttgactatgttcaccttagacttcttcaatagatagtgtatgaaacccaatactagtgtatcacagtatcagaaaagctaggcttgtgaaggaatggtcaatatacttgttcttggagcacgatctagaagagatttagtttctttattaatttctttacatattggatgatgtctctgagttttcgcttccatgaatccatcgatgttttccttccatgattgagtagcatcatctgctagtattttaaatattgctgtggcatttttgcagctggaagaagatgataatttccttgacaatcttaatccatgcacttgccaagagtttccggctcttggagacgcaaacatgcggaatctcaaacaaggagaaatcatacagcttgaaaggaaagggtattacaggtgtgatgctccatttatccggtcttccaaaccaattgtccttttcgctattccagatggacgacaaaagtccgcaacgaagtaggaacctataagatggtttctggaacagcaaatacaagaatcatgttcctgataaaactggtgttgtaaacttgttgattggaattttaaacttaaataattttgttgctccttttattctgactatatgaaaattagctgatcgatc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0271200, RefSeq:Os01g0271200