Os09g0281300

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Revision as of 07:19, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0281300| Description = Protein of unknown function DUF1218 family protein| Version = NM_001069302.1 GI:115478343 GeneID:4346612| Length = 5...")
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Gene Name

Os09g0281300

Description

Protein of unknown function DUF1218 family protein

Version

NM_001069302.1 GI:115478343 GeneID:4346612

Length

5296 bp

Definition

Oryza sativa Japonica Group Os09g0281300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:6556916..6562211

Sequence Coding Region

6557369..6557633,6557725..6557927,6561843..6561947

Expression

GEO Profiles:Os09g0281300

Genome Context

<gbrowseImage1> name=NC_008402:6556916..6562211 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:6556916..6562211 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggggacaccgagaggagctctatactggtccacatcttggtcatcgccctctgcctcaccgcattcggcttcgccatcgccgcggagcgccgccgcagcacgggctcaattgttacagacagcttcaattccacattttgtgtttatgactctgatattgctactggctatggtgttggtgcattcctgtttctcctctctggtcagtcacttcttatggtagttaccaaatgcatgtgttttggcaagccacttgcacctggaggaagtagagcttggtcaatcatatactttgcatcttcatgggtcacattcatgatcgcggagtcgtgcctgatagctggagcaacaaagaacgcgtaccacaccaggtataggcatatggtatacgtggggagctggacttgcgagtccctgcgcaaaggagtttttatcgcgggagcggtcttcgtggtgttcactatgattctgaacgtgtacttctacatgtactacacgaaatcgacaagccaggctgccaaaaagatcaacaagactacccccaatgtcggtatgactggctacgcatga</cdnaseq>

Protein Sequence

<aaseq>MGDTERSSILVHILVIALCLTAFGFAIAAERRRSTGSIVTDSFN STFCVYDSDIATGYGVGAFLFLLSGQSLLMVVTKCMCFGKPLAPGGSRAWSIIYFASS WVTFMIAESCLIAGATKNAYHTRYRHMVYVGSWTCESLRKGVFIAGAVFVVFTMILNV YFYMYYTKSTSQAAKKINKTTPNVGMTGYA</aaseq>

Gene Sequence

<dnaseqindica>4579..4843#4285..4487#265..369#aagcgccgccattcatcgctgctgcgtggtcgtcgtcgtcgccgccgccgtcgtccgccattacagccgactgatccctcctgctcggctccttcctggtgagctactgctgccggcggattctttgctatctttccccccattcacagcctcctctcccgtctccccgtgcagccatgctcactcactcacccactcactcaccagtaggactgaggagcaagcgaatccggtgagcaagtgcgtcgagaaccaagaggagagatgggggacaccgagaggagctctatactggtccacatcttggtcatcgccctctgcctcaccgcattcggcttcgccatcgccgcggagcgccgccgcagcacggtactcaactatgcctcctcgcttttctttttctttttttttatttccctttcccctttcatcttcattccagtaatccttcaagaatcgatcgatcttcccgagtagcggacctctggatcggaaggatttgaatagagcattggacttttgttaaggggctgggctggctactgatgatttttagttttgccgacgtttttttgtgaccaagattctcgatatgaattgttttgtctttggataagggagatttaacttgtgtttcagttgatgtactggatgtctaacttggcttctttatggagtgcgtaactagtactcgcgagtccagattaatccttagtcaacggaatagcaaattagcactactaataattgtttaactgatgtacggtcactcaatgttcaactacttactgttgaggttggatacttagatccacagtttttctgagctaacgtgctatagagtgtaatggaagggggtggggcgttaggagtagggaattgctctgagacttttgggatttagtttgaactaaaactaatggttgtgtgtaaggcatccaaacatcgaatggaagtgtatttctcttggcaatcccaaccaatatctcaatagattgtaagatgactagaaactcgttgtgagtcttaacagccctatcccaaacatgcaagcacaacttatgtggacttactgtgtttagaatgatatgtggtattaacatgtgtttttttcctattaagttgttaaattcctatatgttagagttcagttcttaagctctttttagaacaataggaagggtttaacatcagggaaaaaatgtgagagaattactcaagcagtttgttatatttgtttttgtctctcatttaattggaccatgtgatttacataggtcaaaagtacatatctaagatacattttgaattttgtttttgagtttatggatggagtattttttacaatttacatagttcaggtaatttgcaacacattccaacctagttatgacattgtgtgaagttgcatgtctttttttttttctttggaactctagtgctagttgatattatggaagctttgtctaggtacttattgactgcttatctcttgctgataaaaaattaagggttggaatcaagttttatcatactgaaataaagtacatattttgttagcaacttagcattggtttgtatgctcatgttcttgggtttctaccttatttcatctagtcgtaggtatcttttttttcttgaaaatgcatgaggcttgagcttcatttcattaagagaagaaatacacaagcgaggccgaaagggccctcctccaaaacacgtcagacaaagacgcaccaccaaaacccctactaagtcttaaggatcttagagatatacatatgatgcttttgcaaacttcacacaaagctaactctgaagaccaaaacgttggtcaaatctattttcatatgaaagtaactccataaaacttttacccaatcctatgcacggactcgtttgcatgtaaccaaatttggatttttaacagtaattgaaacatcgcattttcagaacatttgcaaatgtatatactgcactaaaaaggtaagtttgttgcaataatgaacaagaaacaaaacaaagcagattgtaagacatgtattcactaatcaaatatcaaagtggatatgcggtataaagattattttagctcactgccttagctatctggacggttcttttttttgcaacttctctccctagcggtccttggagattacctacctataagcatagatggttcagcctccaccagattgtgctttccccatgcattattttgacactggcagtgtgccggtggatgatttgagacagcagtgaaaaggacagctgatcaatctagggtcaaagatctgaaacaataatggtctggacaattcagtcaagtgaggacggtccattgattatactctaacctagcttagaactcttgggcaggatggtctgctcctttcgtaggacggtcgatttgttgtatcttacccagtcaacatctctatttggcggatggtccgccaaccttgccatactgtctttcccatagaggttacctatgcatgccctataatgtacggacagtctggcaacaccggacagccctgtccatttaactagggaaccctttaccctatccaaatattattgaacacctaattaacttggaactgttttgtataatgcaatagtatgagctactgtttcaagcaaattttcatttaacattacaacaaagataacataaaattaaataaaaaaaaagataacataatcgaatgcacattacgtcaacatatgcacaagcatatcagaggataaaacggctatgtcaaaactaccaagaattgtgcctacagtaagaaaataatttgctttagttgcattgctggattgtggtatgagctcggcaactttggagacaagtctggaaaaggctaactagattgtcgtagttgtgcgtaggaattagtacgagcccactaatttgaccatttatctagacataattggaagcaataaaattctacagtacacagttcactaattgaccttcatgagcttattcctcaccattgggagatgcagttaacagtgccacagtgttgttgattcatatgcctctggtaaagtgataaactgataatattcagaagcaaatgtggagtctactatagcattcatttaggagtacttccagggtatgttttatcctcgcaaaattcaggatgtaaatcccgaaatccccttttatctctgaggcacaaccaaagttaggcaagtgcttggagtcctagtaataaaaatggacctaatttcttctgtgttcttaagatgtctacattctatcgcaccatggcccatagaagtagtaaaaaaatgactatccacaattcctggtgccaatcatcctagttgatccttagattgtttgcagcttgctctaggtggctgagtgtggtggtcaacctagggtacattctgttgttgacatgaaatatgcaaaatatttttaataccaaacgattgtactgggtaactgtaccttttcctccagagtattgtatagctatcttaagtcttaaccataagtaatcaactactgaacaattcaggtttcctaaccaatatatagactaacctcaaatcaaaactaaggtattgcatggcccagagttgttttagtgcatatttgtatttcagcaagaaagattataattgcattaataatggaaggacgagaaacagccatcttgctgtattttgaaggtcaaataggaaatgtgttctttaaccaccaaagtagcttcaccaatcaattcaccgccttataatgttgtctaaatcttcaacattaacacagttacacccttgcccaaaggtccatttgcctctgttgctatatattgagactgtcgtccttatgaagaattcggactgaaattttcacagaaaatatcaatcatcttgtatagtaaaatattgttaactggaattttgtagtcaaattttattggggatgtacacctgaaccttttagtttcaacatgcttttactcgtttgtcaccaacttctggttcgcaatcttgttctaattgcagtattgctacactaaagttagttatgtttttttttaacaaatttagcttctatgttctatcagaagaggaatatctttctactgcaagcacttatccaaagggctagcatgtaataatctctaatatgctaaacattgatttttttttctagtttatactagtcgtatgttctcttgagttgattctgtttatcttacatttctgctgaccataatatcttgtcaattactttgtacataacagggctcaattgttacagacagcttcaattccacattttgtgtttatgactctgatattgctactggctatggtgttggtgcattcctgtttctcctctctggtcagtcacttcttatggtagttaccaaatgcatgtgttttggcaagccacttgcacctggaggaagtagagcttggtcaatcatatactttgcatcttcatggtaaattgcgaagagcaccaatagaaaaattttcgggtcatgcccatttcttgtttccttacataataaatttttcctgccgcattgtcagggtcacattcatgatcgcggagtcgtgcctgatagctggagcaacaaagaacgcgtaccacaccaggtataggcatatggtatacgtggggagctggacttgcgagtccctgcgcaaaggagtttttatcgcgggagcggtcttcgtggtgttcactatgattctgaacgtgtacttctacatgtactacacgaaatcgacaagccaggctgccaaaaagatcaacaagactacccccaatgtcggtatgactggctacgcatgacaattggatttcggtgcatcctgggcagaagattagtttttggataacttggctacggtgtcattgtactatcagatgcttccgaagaagcatgtggtgcagggttgtgcaggttttggcctgtcagagctaattctagtcagtttatggctgggtgcctgggccaagccctatattgctaggatgggagtgattcgtttttgttttgtgctggttagggttaagcacatcatgttctgtttgtaactggtgaagctgccgcctagagcagcttggcaggctagcaatttggtgtgtgttgtagtctgttgtaagtcgattgcctgtattttatttgtgtgcgctagagaagagatgaatctgctggtttcagtaatttcctggccaaggacatcaatttatttgctttgggggatctgagccaatctataaaaatcctatattagtgtgacc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0281300, RefSeq:Os09g0281300