Os01g0273800

From RiceWiki
Revision as of 04:34, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0273800| Description = FAD dependent oxidoreductase family protein| Version = NM_001049251.1 GI:115435915 GeneID:4325177| Length = 5140 bp|...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0273800

Description

FAD dependent oxidoreductase family protein

Version

NM_001049251.1 GI:115435915 GeneID:4325177

Length

5140 bp

Definition

Oryza sativa Japonica Group Os01g0273800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:9487781..9492920

Sequence Coding Region

9487815..9488447,9491586..9491945,9492564..9492767

Expression

GEO Profiles:Os01g0273800

Genome Context

<gbrowseImage1> name=NC_008394:9487781..9492920 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:9487781..9492920 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggtggagcaggatcaggaggaggaggtgatcatcgtcggggcggggccgtcggggctcgcggcggcggcgtgcctgtcggtgcgcggcgtgacgggctgcctcgtcctggagcgcgacgactgcgtggcgtcgctgtggcgccaccgcacctacgaccgcgtccgcctccacctcgccaagcgctactgcgcgctcccgcacgcgccgcacggcgaggcgtcgccgacctacctcccccgcgacgacttcctccgctacctcgacgcctacgcctcccgcttcggcgtccgcgcccgcctccgccgcgaggtccgctcggcgcgctacgacgccgcccgcgcccggtggctcgtcgacgccgtcgacctcgccacgggacgcgcggagcggtacgcggcgaggcacctggtcgccgccgcgggcgagaacgacgagagggtggtgcccgaggtgcccgggatggagacgttccccgggaaggtggtgcacgccgccgactaccggagcgcggaggggttcaaggggaagtccgtgctcgtcgtcggcggcggcaactccggcatggagatcgcctacgacctcgccgtcggcggcgccgccacctccatcgtcatccgcagcgagctgcacctggtgagcaaggagatatggaacttggcgatgacgctgtacaggtacctgccggtgtgggtgatcgacaaggtggtgctgctcatgtgcgccgccgtgttcggcgacaccgcccgctacggcctccggcggccggccgtcgggcccttcaccatgaaggccaccaccacgatgtacccggtcgtggacgtcggcaccttcgccaagatcaggtccggcgagatccgcgtcctcccggccgccatcaagggcgtccgcggccgcgacgtcgagttcgccgacggccagcgccacgccttcgacgccgtcgtcttcgccaccggctaccggagcaccaccaagcactggctcaagagtgatgacgggctgatcggcgacgacgggatggcggggcggagctacccggatcactggaagggggagaacgggctgtactgcgccgggatggtgaggaggggaatctacggcagctacgaggacgcggagcacatcgccgacgacatcagcaagcaactccggagcagcagcaagcctacccacaacaatggctcggcctag</cdnaseq>

Protein Sequence

<aaseq>MAAVEQDQEEEVIIVGAGPSGLAAAACLSVRGVTGCLVLERDDC VASLWRHRTYDRVRLHLAKRYCALPHAPHGEASPTYLPRDDFLRYLDAYASRFGVRAR LRREVRSARYDAARARWLVDAVDLATGRAERYAARHLVAAAGENDERVVPEVPGMETF PGKVVHAADYRSAEGFKGKSVLVVGGGNSGMEIAYDLAVGGAATSIVIRSELHLVSKE IWNLAMTLYRYLPVWVIDKVVLLMCAAVFGDTARYGLRRPAVGPFTMKATTTMYPVVD VGTFAKIRSGEIRVLPAAIKGVRGRDVEFADGQRHAFDAVVFATGYRSTTKHWLKSDD GLIGDDGMAGRSYPDHWKGENGLYCAGMVRRGIYGSYEDAEHIADDISKQLRSSSKPT HNNGSA</aaseq>

Gene Sequence

<dnaseqindica>35..667#3806..4165#4784..4987#acctctctctcgattcaccacggcggcgacggcaatggcggcggtggagcaggatcaggaggaggaggtgatcatcgtcggggcggggccgtcggggctcgcggcggcggcgtgcctgtcggtgcgcggcgtgacgggctgcctcgtcctggagcgcgacgactgcgtggcgtcgctgtggcgccaccgcacctacgaccgcgtccgcctccacctcgccaagcgctactgcgcgctcccgcacgcgccgcacggcgaggcgtcgccgacctacctcccccgcgacgacttcctccgctacctcgacgcctacgcctcccgcttcggcgtccgcgcccgcctccgccgcgaggtccgctcggcgcgctacgacgccgcccgcgcccggtggctcgtcgacgccgtcgacctcgccacgggacgcgcggagcggtacgcggcgaggcacctggtcgccgccgcgggcgagaacgacgagagggtggtgcccgaggtgcccgggatggagacgttccccgggaaggtggtgcacgccgccgactaccggagcgcggaggggttcaaggggaagtccgtgctcgtcgtcggcggcggcaactccggcatggagatcgcctacgacctcgccgtcggcggcgccgccacctccatcgtcatccgcagcgaggtcagctagcttgcttagctcttgtctcctatactagcttaattataattaattcgtttcaatcgtttccaaattaaattcgatttgccattaaaacgagcgaatttcaagctctgtttatttgtccctcgtttaatttgcttataattaattatttttgatttaccaattaattaatcgaatttgtaccttaaaaaaattatacgaccgaatcgaatatttggtactagtataattgttatttgaccaaatttggtagggccgggccaattaataacatcctagccaccttaaaagagctagatttgccaataattttcgtaacattcttattatttgctagtataccaacccctggccccacacgctagtgagaatgagaaaagctattttttttttgtattttctttggtaccaattaatccatggccccacatgccagtgagtgagagtacccgtgcttgatcagttgatcggtgaggaagtaccttgaattaatttacgaccatcggatcgcctaacggacggctaggatcgagtaatcaagctgagtaattaattaaccataattagttactgacagagatcttaaagagggattaattagcagtggacgcggcgggctcctgaccgtgattaagctctgtaattaattaaaaccatccacgttttcttcctttccaatggatcgatcagtacatgtggttattaatcaccagggttaattacttcattactccctagtgttgctggtactacgtagtagtagcgattaattaagacatgacgacgcaacagtccaaattctttcagtgtggtcctaagctaccatcagtactgatgaaacatgacaaatagagaaactccaactaactttgaaatgaaacaaaaaaacacacgtacggagatcgaaattgatccccaaacaccaacattacaggtttacattaatggtctatatgaaaaaaaattaaaaaagagacagagtataatatgccaataaattcggtgaatagaaggtgtgaccacaaataagacgacgtatatttaattaggacatgggacgtatttagaacagaaataaccacacaatctattcaatggtaaaatgtgtacccacgccgctatatatataaggttaattagtccttaatttagtctctttagactgtgctagctagaatataatcatgtacaggtgtttgtaggcgtgagtaattaagtgtgtgcatcctgacgtgtattttgggcaaccaacatgaaagctgtttttttttttaaaacttgggctctttaattccagaggactcgaaagtggaaataaattaaacaattaaaccaacaacctggcagagaatttcgttgctgtatgattaattacagtagtgtgcatgcttattgcaaattttattagacccaaccatataaaatggtatccgagagctatatcgtgggcggcgccatgtaaaagtataaataacttgactatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatattcatcgtcgctggcacatggcctggtctctctcgaactctgacatcacgtgcaggcaaattaaacacatcatcgatcgatcagactacacaatgattttgctcctaattaatctcagccggagaccgcagctgattaaatgcgtaatgtaattcaggtcaggttgcatgcatgcagcataggatccgatgattattttgcttaaaaacatcattaactcgattgttatcaatcacatcacaagcatatatatgtggctcgatccagtatacgtacgttcatctctctgtatgtatgtcgtacgtatatactgtaccgtacgtgcgtcatcgtcatcaggagggaaaaaaacacgttacacgtgcacgcctttgtctgattttcgcatggcgacgccagatccacgcaggcatatcatagtccgtccagcgtccctccggacggcctgggatcctgtcctctagtattttcttgttccaattattaggggagccctctatttgcggctctatttgattcgggctaaatataactatacgtagacagaaagttattcctccctccattctaaaatataagatataactaccattaacccaaaaactaagaaataattattatcgcatcgtagtttagattaccctaataaatagaatacatgcacccaataaaattagagatcttgttgatggaggatttaaataatattattataataaaaaaagatgggctagttaatgacatacatgcatatacgccttatattatgaaataacttgaaacaactttaaaaattagttacgccttatattatggaatggagggagtatatctctacttatttaaatgtagtgtggttatccttcttttttttttccttcttaccgtgtgccaaaagtcgtacggtccttcgtgtgtgcgtaattaccgtaggatctagtttcagagatgtcagtaataatatcattaattaattaaaatttttaatgtaactagtctttgattaatcactatacatctgttggtttagacatcaacacaacgttctataatatccatggaactagcatattgaccgtgcgttgtaacgtgattttaatcaaataaaaaattatcactaagatgttattatcatctcttaattgatgtatatatatttgttactgacatatgaatcctttagtactacactattacttttccttcttataaaaaacatatagttggtgggagtggttgacatataggtcctctagacccacatgccatttttgctaaaaagaaaagttaggagttggtggggggtcggtggcggaacaagaaccaccactactcgagtatagataaacttttttttaaaaaataaaaatataattatatgaaagagctttttatgaaaaatctattaatataaaatttcattttgattttttaaaatattttaatatttagtaatgatttaagatttcgagattttttctacacgcataactgtagtacgtcgtccttactccttagcgaggtaatctcagtgaccattctggttaatcatgcaatctaaattgcaaccaattaattaatcgatcgcagctgcacctggtgagcaaggagatatggaacttggcgatgacgctgtacaggtacctgccggtgtgggtgatcgacaaggtggtgctgctcatgtgcgccgccgtgttcggcgacaccgcccgctacggcctccggcggccggccgtcgggcccttcaccatgaaggccaccaccacgatgtacccggtcgtggacgtcggcaccttcgccaagatcaggtccggcgagatccgcgtcctcccggccgccatcaagggcgtccgcggccgcgacgtcgagttcgccgacggccagcgccacgccttcgacgccgtcgtcttcgccaccggctaccggagcaccaccaagcactggctcaaggtaattgtaattaattaataagttaattaattgaacagtactgtgttaattgtttgcatcatgattcgtacgtgcggcgacacaattaattattgctgctcccggccgtatgcatattcctatttggaaaagtctgaggctttggcatgaagcaaagctcgacaaggtctcaactttcagcagcatacacctcatgctgaacgtacatactgatccgtctcgtaatataaagtattttttgatggatgtgacacatcctaatataatatttgtccagattaattaaatcaggatgtgttacatctatccaaaatcccttatattatgagacgaggtagtacatgtttttcgaataatatatcagcgatagctagtgtggcttatgacaacatttttttttcaatccgaaacacacaaaagctttacatgttatttaaccatcaacaataaaagctctaatatttttgtttttttaaaaaacagaatggcacattaaaaatcatgttttaattaaccttattgtacgatcttaactatgccatatgctagatagtaccttatttatatattttacatatgttttctaacatttgtgtgtaattaaatttaattttatagagtgatgacgggctgatcggcgacgacgggatggcggggcggagctacccggatcactggaagggggagaacgggctgtactgcgccgggatggtgaggaggggaatctacggcagctacgaggacgcggagcacatcgccgacgacatcagcaagcaactccggagcagcagcaagcctacccacaacaatggctcggcctagaaagaaattaaatcaagctgatgaggctctcccccttggaccttgtcttggttattatattaggtgtagcttttatactatgattttgtttctgagtttgtggatgtggatgaaataaacaaaataaaacttgcccttgggtggtctttgatt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0273800, RefSeq:Os01g0273800