Os01g0276000

From RiceWiki
Revision as of 04:34, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0276000| Description = Similar to 60S ribosomal protein L30| Version = NM_001049259.1 GI:115435931 GeneID:4324441| Length = 3102 bp| Defin...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0276000

Description

Similar to 60S ribosomal protein L30

Version

NM_001049259.1 GI:115435931 GeneID:4324441

Length

3102 bp

Definition

Oryza sativa Japonica Group Os01g0276000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:9657130..9660231

Sequence Coding Region

9657338..9657375,9657465..9657533,9657902..9658003,9659875..9659980,9660125..9660145

Expression

GEO Profiles:Os01g0276000

Genome Context

<gbrowseImage1> name=NC_008394:9657130..9660231 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:9657130..9660231 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggccgcaaagaagacgaagaagtccacggacaacatcaacaacaagctgcagctcgtgatgaagagcggcaagtacacgctcggctacaagaccgtcctcaggaccctcaggaactccaaggcgaagctagtgatcatttctaacaactgcccacctcttcggaagtcagaaattgagtactacgctatgttggccaaggtcaccgtccaccatttccacggaaataatgtcgatctggggacagcctgtggtaaatacttccgtgtttgctgcctcagcattattgatcctggtgactcggatatcatcaagaccacgggtgagcagtaa</cdnaseq>

Protein Sequence

<aaseq>MVAAKKTKKSTDNINNKLQLVMKSGKYTLGYKTVLRTLRNSKAK LVIISNNCPPLRKSEIEYYAMLAKVTVHHFHGNNVDLGTACGKYFRVCCLSIIDPGDS DIIKTTGEQ</aaseq>

Gene Sequence

<dnaseqindica>2857..2894#2699..2767#2229..2330#252..357#87..107#ttccacctcgcagtcgccaccccgagcagaagccgccgccgccgcccgaaaccctcgccgccgtcgcttctcctcggggcgcagccatggtggccgcaaagaagacggtaacgttgtcctcctcccggtctctccctccatcacctcggtccgccgcgcaagcgagcgagcgagcgagatcctgcatttctcatggcgctaacgcctctctgttcgtcgtggtgatggtgtgatggtggttgtgtttgcagaagaagtccacggacaacatcaacaacaagctgcagctcgtgatgaagagcggcaagtacacgctcggctacaagaccgtcctcaggaccctcaggaactccaagggtaagatggatcaatgctctcctttccctgttagattacgccaaattctagtttaaggttcgcatccgtgttgttagtattgcggttttatagtgagtttgggcatcgtaataactgattaccggtggatctcatcgccgccgcgtatgagtcgatgccacagtgattagccccactgtctctgttcttctgaatgtgcttgatattgctgttcagtagctgatggtggtgtatatacttaggtaggatttacatggacttaccccaagacttaaaacattcccctcttacattcaatctttgtacccaatgaaacttatacccgctctctgtttttttattgcctgtatgttgacttgtacccgctctctgtttttttattgcctgtatgttgtattgctgtgtgctgttgtctacattttagctttggatatgtccatacggaggatatgatgatcctttccccagatgatcgacaatgaacataccgtgcgattgttttctcttaggagataatcaagccagaaatctgatcctcgaattttaatgtagagtttttttttctgaaagatttcctttatcttcaaatgagttggttcttgattagtttcattgtgcttatttaccatcatcctttggatggatgttagtgtgagtatgcgcatcgtataaactgattaccggtggatctcattgctgctgtgtatgagtcgatgccatagccatgccccactgtcattgttcttctgaatgtgctcgatgttgtggttcagtatttggcagtggtgtatatacgctttatggtttagtattaacatagacttagccaagacttgacatattcctgtatgctttttgtttggctgtgttgtactcaaatgtgaatacgttgtcaagctatttctagtttatgtgtttatcagctgtttgtcctagctgagtagcctgtatgttgtagtgcactttctttatttagttttggttgaattggtagtggaggatatgacgatcctttccccagatgatcgacgatgagcataatgtgcgctattgttctcttaagagataatcaagccagaactatgattctccaaatttaatgcagtctcttttgctgaaagatttgttttatctgaaaatgtactgatttgtggttaatttcattgtgctgcctatttttcctgattcttttagcatgttgtggtgaaattttatttggtgctgcttaatatggagaatatgatgatcctttccccagatgatcgacaatgaacatactgagcgctattatttctcttttgagaaccaagccagtattctgattctccaaatcttatgcaggcatttccttttattttgagcaagcagtggttgtttcctagactgtgatggatttattgatatgttcaattgtttagcttgggtatgataacatagataattgtctattatgatctttgcaaatttgttgctccaggttgaaacctttagcgttgaaaactgattaccggtggatttagtaccaatatggccaatgtgtatgagtcaacgccataataattctccattttctgcatacagtaactgtgatgtcaactgcttatttgcagaagtggaaacatgctttatgaaaaacgtttttttactatgagtcttcagtatgattgcaaggaaaattttctgtaactgtagggaattaagcttgtagagtgtccttttttctctctgaccatttgcatgtaatgttttactttcatcagctctttctcattgtgtaaacttttcagagcatggctgcatactaccctactttgttttgtcatctttgctggcagactgatatctaatgtccccgcatgtcttcattacagcgaagctagtgatcatttctaacaactgcccacctcttcggaagtcagaaattgagtactacgctatgttggccaaggtcaccgtccaccatttccacggaagtaagttgacacccatgcttttcgacatctcttgacctttgcaaagatttaaacagtgaggcatgcttgggagtaaatatgtaatcaaattatatcgtagaaacgccatgctaattatttttatgcgtttttttaaatgaaactgaaataaggtgcacagttctatcttctgttgccatggcaatgctgcatttgtttgtagcaactgcaaagtggaccaaagaagacttacaaattcatagataggacaaatgaataaactgtgcagacatcggtttctgccatatgcccatattgcttgattagccagtcttattacattagctgtgtctttgtttgaaaaataacagctatctgtttgttttcagataatgtcgatctggggacagcctgtggtaaatacttccgtgtttgctgcctcagcattattgatcctggtaacttccatacgtctacctagtatttgaaagaaactaaacaaaaccgttatttgatagtaatactgtacaatgcgcttgatttccaggtgactcggatatcatcaagaccacgggtgagcagtaaggatgagcggttccgctggcgcttcagatgctgtcacactgagctgttctagacattgtagttgttgctggacttgatttggtctctctcgtgtatcgaacagcttttaccagtcaaccaaagtttcgtgggaacattgttcttggattggaaaattttgttcctggcccgaatcatgttttcaattagaacgcttggctgtttgttc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0276000, RefSeq:Os01g0276000