Os01g0276400

From RiceWiki
Revision as of 04:34, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0276400| Description = Similar to Presenilin 2 (PS-2) (Fragment)| Version = NM_001049263.1 GI:115435939 GeneID:4324260| Length = 1316 bp| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0276400

Description

Similar to Presenilin 2 (PS-2) (Fragment)

Version

NM_001049263.1 GI:115435939 GeneID:4324260

Length

1316 bp

Definition

Oryza sativa Japonica Group Os01g0276400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:9681751..9683066

Sequence Coding Region

9681816..9682871

Expression

GEO Profiles:Os01g0276400

Genome Context

<gbrowseImage1> name=NC_008394:9681751..9683066 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:9681751..9683066 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgcttctccgccttcttcgtcctcttctccatgggcggcgccatcgccgccgccgtcctccgccgcctcggcgccccgctcgacgccgccaccgcgctcgtgctcctcttcaacgcctccgccgtcggcgtcctctccgtcttcgcctccgcggtccccatcgtcgtgcgccagggctacatggtcgccctcgccgtcatcgtcgccgcctggctctccaggctgcccgagtggaccacctgggtcatgctcatcgcgctcgccctgtatgacctcgtcgccgtgctcgcgccgcggggtcctctcaggatgcttgtggagctcgcctcatccagggacgatgagctccctgcgctcgtctacgagtcgagaccgacggttgggccggcctccggttcttcctcctacgcttcagccatgggatcagttgagatgcagccggtggccgatcccggtcgatcgggtggaaatcagtatgacagagtagagcaggaggatgattcgagccgcgccgtggtggaaatgagggatgttggtggtagccgatcaagcattcgtgagaggaacctcgaaagggaggcgccgatggcggtatcggtatcagggcattcatcgaatcagggtgggagttcacagcatgctgtgattcagattgagcagcacgaggaaggagagacagtgccattggtatcagcggcatctgccaacaatgcagcccctaatgaggagcacagagaaaactcttcttcagactctggtatggagttcgagatgttcgagtccaccaggggcatcaagctgggacttggtgattttatcttctacagcgtgcttgtggggagggctgcgatgtatgatctgatgacggtgtatgcgtgctaccttgccatcattgctgggcttggctgcacccttatcttgctgtcaatatgcaagcatgcattgcctgcactcccgatctccatcttgctgggtgtcacattctacttcttgactcggttgctgatggagccgttcgtcgttggctcttcaaccaacttggtgatgttctga</cdnaseq>

Protein Sequence

<aaseq>MRFSAFFVLFSMGGAIAAAVLRRLGAPLDAATALVLLFNASAVG VLSVFASAVPIVVRQGYMVALAVIVAAWLSRLPEWTTWVMLIALALYDLVAVLAPRGP LRMLVELASSRDDELPALVYESRPTVGPASGSSSYASAMGSVEMQPVADPGRSGGNQY DRVEQEDDSSRAVVEMRDVGGSRSSIRERNLEREAPMAVSVSGHSSNQGGSSQHAVIQ IEQHEEGETVPLVSAASANNAAPNEEHRENSSSDSGMEFEMFESTRGIKLGLGDFIFY SVLVGRAAMYDLMTVYACYLAIIAGLGCTLILLSICKHALPALPISILLGVTFYFLTR LLMEPFVVGSSTNLVMF</aaseq>

Gene Sequence

<dnaseqindica>196..1251#gcggccgccgcgcagccgccgccgccggtcaccgccgcgacgctcgtctacctcgagagccccaccgacaccccggggcagaagctcgtcggcgcgctcctcgacgccgccgtcttcgtcgccctcgtcgccgtcgtcaccttcgtcctcgtcgcgctctactactaccgctgcacgggcttcctcaagaactacatgcgcttctccgccttcttcgtcctcttctccatgggcggcgccatcgccgccgccgtcctccgccgcctcggcgccccgctcgacgccgccaccgcgctcgtgctcctcttcaacgcctccgccgtcggcgtcctctccgtcttcgcctccgcggtccccatcgtcgtgcgccagggctacatggtcgccctcgccgtcatcgtcgccgcctggctctccaggctgcccgagtggaccacctgggtcatgctcatcgcgctcgccctgtatgacctcgtcgccgtgctcgcgccgcggggtcctctcaggatgcttgtggagctcgcctcatccagggacgatgagctccctgcgctcgtctacgagtcgagaccgacggttgggccggcctccggttcttcctcctacgcttcagccatgggatcagttgagatgcagccggtggccgatcccggtcgatcgggtggaaatcagtatgacagagtagagcaggaggatgattcgagccgcgccgtggtggaaatgagggatgttggtggtagccgatcaagcattcgtgagaggaacctcgaaagggaggcgccgatggcggtatcggtatcagggcattcatcgaatcagggtgggagttcacagcatgctgtgattcagattgagcagcacgaggaaggagagacagtgccattggtatcagcggcatctgccaacaatgcagcccctaatgaggagcacagagaaaactcttcttcagactctggtatggagttcgagatgttcgagtccaccaggggcatcaagctgggacttggtgattttatcttctacagcgtgcttgtggggagggctgcgatgtatgatctgatgacggtgtatgcgtgctaccttgccatcattgctgggcttggctgcacccttatcttgctgtcaatatgcaagcatgcattgcctgcactcccgatctccatcttgctgggtgtcacattctacttcttgactcggttgctgatggagccgttcgtcgttggctcttcaaccaacttggtgatgttctgattaatctgctattgccattttacatatgtgaaacaagaaagaggaaatgattggcattttttttc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0276400, RefSeq:Os01g0276400