Os01g0277600

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Revision as of 04:34, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0277600| Description = Similar to Phospholipid-transporting ATPase 1 (EC 3.6.3.1) (Aminophospholipid flippase 1)| Version = NM_001049271.2 G...")
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Gene Name

Os01g0277600

Description

Similar to Phospholipid-transporting ATPase 1 (EC 3.6.3.1) (Aminophospholipid flippase 1)

Version

NM_001049271.2 GI:297596543 GeneID:4324268

Length

6107 bp

Definition

Oryza sativa Japonica Group Os01g0277600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:9737578..9743684

Sequence Coding Region

9737578..9737729,9737769..9737794,9738683..9739141,9739369..9739588,9739688..9739811
,9739907..9740615,9741806..9742112,9742193..9743684

Expression

GEO Profiles:Os01g0277600

Genome Context

<gbrowseImage1> name=NC_008394:9737578..9743684 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:9737578..9743684 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcttccgggcgcccgctgctcgacgcctcgccgcggccgacgcagcagccgccggcgtcatcgctgctcccgccgccgcagccggagccgcccctccgagccgaccgcctcgcgttctccctcgaggtgcccgaccccttccgccgggagcccgacccgtcgtcggccgcgtcgcagcggggggaggaggaggggggcggcgaggaggagtcccgcgcggttgttgtcggggagccctcgtcttcggaggcggcggcggggttcgccgggaacggcgtacggacggcgaagtactcggtgctgacgttcctgccgcggaacctgttcgagcagttccggcggctgtcgtacgtctacttcctcgccatcaccgtgctcaaccagctcccccaggtcgccgtcttcggccgcggcgcctccgtgctcccgctcgccttcgtcctcttcgtcaccgccgtcaaggacgcctacgaggacctccgccgccaccgctccgaccgccaggagaacaaccgcctcgccagggtcctcctggcgccgcccgccgcgggggagttcgcgcccaagaaatggaagcacatccgcgtcggggacgtcgtccgcgtcgcctccagcgagacgctccctgccgacatggtgctcctcgccaccagcgacccctccggcgtcgcgcacgtccagaccgtcaatcttgacggggagaccaacctcaagacgaggtatgctaagcaggagacgcaactgaggttctcgcaggacggtggaatcggcggtgtccttcattgtgagcggccaaacaggaacatctatggatttcaggcgaatttggagattgatggcaagcgtgtctcgctagggccatcgaacattgtgctccgtggatgtgagctcaagaataccacctgggcgataggggttgttgtgtatgctggaaaggagaccaaggtcatgcttaatagctccggggcgccgtcgaaacggagccggttggagacacagttgaaccgggagactgtcatactgtccattatgctcattgggatgtgcacgaccgcaagtgtgctcgcggggatttggatactgaatcaccgtggggatttggaattcacccagttctttagggagaaggattacacgacagggaagaactacaattactatggcatggggatgcagatattcattacattcctcatggcggtgattgtatatcaggtcatcattccgatctctttgtatatatcaatggagttggtacggcttgggcaggcatatttcatgggtgctgacagagatttgtatgatgagtcatcaaggtcaaagttccaatgcagggccctgaatataaacgaggatctaggacagattaaatatgtattttctgataagacagggacgctgacagagaacaagatggagttccagtgtgcatcaattcggggggttgattactgttctggcaaagattcatgcggatactcagttgtagtcgatgatctcctatggacacccaagatggcagtcaagattgatcatcggcttttgaagttactgaggggtggtggcacagatgaggaaacaaagcttgtcctcgaattcttccttgctcttgctgcatgtaataccattgtgccacttgtcctagatactcgtgattctaagcaaaagttgattgattatcagggtgagtcccctgatgagcaggcactagtgtatgctgcggcatcttatggcattgtgcttgttgagcgaacatctggttatgtggtgattgatgtccttggtgacagacagagatttgatatattaggacttcatgagtttgatagtgatcgtaagaggatgtctgtcatagttggctgccccgataagactgttaagctatatgtgaaaggtgcggacagttcattgtttggaattaccaaaaattcattagatctggacattgttcgtgctacagaggcacacctccacaaatattcatcgtttggtctaagaactctcgttattggcatgcgtgaattgagtcaacctgagtttgaggagtggcaattggcatatgaaaatgctagcacgtcagtacttggaaggggaaatttactccgatcagttgcggccaatatagagaacaatatccgcatattgggggctactgggatagaagataagcttcaagatggggttccagaaacaatagaatctcttcgacaagcagacataaaggtttggattttaacaggagataagcaggagacagcaatttctattggctactcttgtaaactgctgaccaatgacatgacacaaattgtgataaacaacaactcaaaggagtcttgtaagaggagtctcgaggaagcacatgcaacgattaagaagctcagaattgcttcaactggcacacagagtccagaattagcatcagaatctgctggtgtaactcttgcgttaattgtagatggtaacagcctggtttacatacttgagacagagttgcaagaagagcttttcaaagtggcaagagaatgtagtgttgtattgtgttgtcgggtggccccgttacaaaaggcagggatagttgcacttatcaaaaaccgaacagatgacatgaccttagcaattggtgatggtgcaaatgatgtttcaatgattcaaatggctgatgttggtgttggcatcagtggtcaagaaggacggcaggctgtaatggcatcagattttgcgatgggccaattcagattcttggtccctcttctattagttcatggccattggaattatcaaagaatgtcatatatgatcctctacaacttttacaagaatgcgacatttgtcttggttcttttctggtatgtactttatacagcattcactctgacaactgctatcacagaatggagtagccttttgtatactgtgctatatacatcccttccaacaattgttgttggtattcttgacaaggatcttagtaaggaaacactactagcttatccaaagctatatggatctggccaaagggatgagaagtataatgtaaatttgtttgtcctcaatatgctcgaagcgctatggcaaagtctggttgttttctacatgccatattttgcatatagacaaagtacgatagatatgtctagtctgggagatctatgggcacttgcccctgtcattgttgtaaatatgctactagccatggacatctttcggtggaattggatcgtacatgcttttgtgtggggaacaatagcagcaacaaccatttgcctctttgtgatcgactccatttggtttcttcctggatatggggccatctttcatataatggggacagcaatggtaccacattttgtaatcaaggcctttacagagtattttacccccagtgatattcaagttgcccgagagatagaaaaattcgagaatgtaaatcaggtgaaccgttcagaagttccaatgacacgtctgcatgacccaaggagatag</cdnaseq>

Protein Sequence

<aaseq>MASGRPLLDASPRPTQQPPASSLLPPPQPEPPLRADRLAFSLEV PDPFRREPDPSSAASQRGEEEGGGEEESRAVVVGEPSSSEAAAGFAGNGVRTAKYSVL TFLPRNLFEQFRRLSYVYFLAITVLNQLPQVAVFGRGASVLPLAFVLFVTAVKDAYED LRRHRSDRQENNRLARVLLAPPAAGEFAPKKWKHIRVGDVVRVASSETLPADMVLLAT SDPSGVAHVQTVNLDGETNLKTRYAKQETQLRFSQDGGIGGVLHCERPNRNIYGFQAN LEIDGKRVSLGPSNIVLRGCELKNTTWAIGVVVYAGKETKVMLNSSGAPSKRSRLETQ LNRETVILSIMLIGMCTTASVLAGIWILNHRGDLEFTQFFREKDYTTGKNYNYYGMGM QIFITFLMAVIVYQVIIPISLYISMELVRLGQAYFMGADRDLYDESSRSKFQCRALNI NEDLGQIKYVFSDKTGTLTENKMEFQCASIRGVDYCSGKDSCGYSVVVDDLLWTPKMA VKIDHRLLKLLRGGGTDEETKLVLEFFLALAACNTIVPLVLDTRDSKQKLIDYQGESP DEQALVYAAASYGIVLVERTSGYVVIDVLGDRQRFDILGLHEFDSDRKRMSVIVGCPD KTVKLYVKGADSSLFGITKNSLDLDIVRATEAHLHKYSSFGLRTLVIGMRELSQPEFE EWQLAYENASTSVLGRGNLLRSVAANIENNIRILGATGIEDKLQDGVPETIESLRQAD IKVWILTGDKQETAISIGYSCKLLTNDMTQIVINNNSKESCKRSLEEAHATIKKLRIA STGTQSPELASESAGVTLALIVDGNSLVYILETELQEELFKVARECSVVLCCRVAPLQ KAGIVALIKNRTDDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFR FLVPLLLVHGHWNYQRMSYMILYNFYKNATFVLVLFWYVLYTAFTLTTAITEWSSLLY TVLYTSLPTIVVGILDKDLSKETLLAYPKLYGSGQRDEKYNVNLFVLNMLEALWQSLV VFYMPYFAYRQSTIDMSSLGDLWALAPVIVVNMLLAMDIFRWNWIVHAFVWGTIAATT ICLFVIDSIWFLPGYGAIFHIMGTAMVPHFVIKAFTEYFTPSDIQVAREIEKFENVNQ VNRSEVPMTRLHDPRR</aaseq>

Gene Sequence

<dnaseqindica>5956..6107#5891..5916#4544..5002#4097..4316#3874..3997#3070..3778#1573..1879#1..1492#atggcttccgggcgcccgctgctcgacgcctcgccgcggccgacgcagcagccgccggcgtcatcgctgctcccgccgccgcagccggagccgcccctccgagccgaccgcctcgcgttctccctcgaggtgcccgaccccttccgccgggagcccgacccgtcgtcggccgcgtcgcagcggggggaggaggaggggggcggcgaggaggagtcccgcgcggttgttgtcggggagccctcgtcttcggaggcggcggcggggttcgccgggaacggcgtacggacggcgaagtactcggtgctgacgttcctgccgcggaacctgttcgagcagttccggcggctgtcgtacgtctacttcctcgccatcaccgtgctcaaccagctcccccaggtcgccgtcttcggccgcggcgcctccgtgctcccgctcgccttcgtcctcttcgtcaccgccgtcaaggacgcctacgaggacctccgccgccaccgctccgaccgccaggagaacaaccgcctcgccagggtcctcctggcgccgcccgccgcgggggagttcgcgcccaagaaatggaagcacatccgcgtcggggacgtcgtccgcgtcgcctccagcgagacgctccctgccgacatggtgctcctcgccaccagcgacccctccggcgtcgcgcacgtccagaccgtcaatcttgacggggagaccaacctcaagacgaggtatgctaagcaggagacgcaactgaggttctcgcaggacggtggaatcggcggtgtccttcattgtgagcggccaaacaggaacatctatggatttcaggcgaatttggagattgatggcaagcgtgtctcgctagggccatcgaacattgtgctccgtggatgtgagctcaagaataccacctgggcgataggggttgttgtgtatgctggaaaggagaccaaggtcatgcttaatagctccggggcgccgtcgaaacggagccggttggagacacagttgaaccgggagactgtcatactgtccattatgctcattgggatgtgcacgaccgcaagtgtgctcgcggggatttggatactgaatcaccgtggggatttggaattcacccagttctttagggagaaggattacacgacagggaagaactacaattactatggcatggggatgcagatattcattacattcctcatggcggtgattgtatatcaggtcatcattccgatctctttgtatatatcaatggagttggtacggcttgggcaggcatatttcatgggtgctgacagagatttgtatgatgagtcatcaaggtcaaagttccaatgcagggccctgaatataaacgaggatctaggacagattaaatatgtattttctgataagacagggacgctgacagagaacaagatggagttccagtgtgcatcaattcggggggttgattactgttctggcaaagattcatgcggatactcagttgtaggtacgatgtctttaatgtatatttctggttttcatgttgaactttcctagtatggctgcttattttctggttttggacagtcgatgatctcctatggacacccaagatggcagtcaagattgatcatcggcttttgaagttactgaggggtggtggcacagatgaggaaacaaagcttgtcctcgaattcttccttgctcttgctgcatgtaataccattgtgccacttgtcctagatactcgtgattctaagcaaaagttgattgattatcagggtgagtcccctgatgagcaggcactagtgtatgctgcggcatcttatggcattgtgcttgttgagcgaacatctggttatgtggtgattgatgtccttggtgacagacagaggtaaggtagtctttcatcatttgctttatggacatgctaattttcaactctgcatgagtgtgttttcaataataattagtggcattatgcaatttagctaataccaattttggtgtatcaacatcattatgtgactaggagtggatgtctgctacagtgctagtgtgctacctgatccatgatgtttacatctctggaaaattatacctacaaaactttattcaactgcaatgtcatatagtcatcaacagttggtagcataacttattcaataacgattttcacaagtgttttatgcactttgctttatggtgtttagtgacgtcattcttttgtcttatcttattggtttgctggtgtgaatgctaactttgagttgtatcttgctagttatcttcctattcctattcttagcatacagttaatatttattcaaaataaaaataataatttggaatattttgggatgcaacgtgccaactccaaatgatttgtggcattaccccacatgagcgaaatttcagtacttagtttatcaggcttacctcttggagatatgttacaactctccaagtgcatgtcttgacttttccttgtgtttatagacatgcttgcatatcctattatagtaagctagtttgtggagccaatactgtaatatattggttgaatatatttgatgaatggagctctttttattggttaatcaccaactgtagagagttaaatgtgtttgctgtaagtccatgtcaaacacctgggctataggcaaaaccaagttaattatcactttgaacccagttattgtgatgagcacatatctgcactagggccataaatttgtaaggagctgcattgaacaggctggcatttataaacaaagcaaatttaggatgtgcatatggatttgcagctgaatttctggataatttggataaaaccatatcatttttcaccaaaccaaatgtttatctaacatttttaataacactattccaaaaggcattcttagttacctcatatgtacgaagtacgctagctttgtttataaatgcccgctttgttactacattgactactctgctccattctttcagttcgttgttctttatgtgtaaattttattttcaatatcttgtttacaagaatggcttatagttccaatttatcttctggtatgggatgtgcagatttgatatattaggacttcatgagtttgatagtgatcgtaagaggatgtctgtcatagttggctgccccgataagactgttaagctatatgtgaaaggtgcggacagttcattgtttggaattaccaaaaattcattagatctggacattgttcgtgctacagaggcacacctccacaaatattcatcgtttggtctaagaactctcgttattggcatgcgtgaattgagtcaacctgagtttgaggagtggcaattggcatatgaaaatgctagcacgtcagtacttggaaggggaaatttactccgatcagttgcggccaatatagagaacaatatccgcatattgggggctactgggatagaagataagcttcaagatggggttccagaaacaatagaatctcttcgacaagcagacataaaggtttggattttaacaggagataagcaggagacagcaatttctattggctactcttgtaaactgctgaccaatgacatgacacaaattgtgataaacaacaactcaaaggagtcttgtaagaggagtctcgaggaagcacatgcaacgattaagaagctcagaattgcttcaactggcacacagagtccagaattagcatcagaatctgctggtgtaactcttgcgttaattgtagatggtaacagcctggtttacatacttgagacagagttgcaagaagaggtactcatctaaatatgattcttttttttcatttcctttcatccttggtataaaatcatagttgatgcatggactttcttcttttgtttgtgtagcttttcaaagtggcaagagaatgtagtgttgtattgtgttgtcgggtggccccgttacaaaaggcagggatagttgcacttatcaaaaaccgaacagatgacatgaccttagcaattggtgatggtattattccctcctggttctgctattatggcatataatattctgtgagaaccaatttatgtacatgtgatatatgctaattaatcttttgttgttcaggtgcaaatgatgtttcaatgattcaaatggctgatgttggtgttggcatcagtggtcaagaaggacggcaggctgtaatggcatcagattttgcgatgggccaattcagattcttggtccctcttctattagttcatggccattggaattatcaaagaatgtcatatatgatcctctacaacttttacaagaatgcgacatttgtcttggttcttttctggtaagagcccttttgcattgaagttttcacactttgaaaaaaaaaactgtttttatgtagaaaattatctaaacgttactgtggaaacccccatgttagtaagacctagtgaaaagaagtggactctatttatgttcagttgaattaccaaagttgttgctttcttaatttttgcaatattcagagacattgtctccaaaatataacacttaattttgtgatctcaggtatgtactttatacagcattcactctgacaactgctatcacagaatggagtagccttttgtatactgtgctatatacatcccttccaacaattgttgttggtattcttgacaaggatcttagtaaggaaacactactagcttatccaaagctatatggatctggccaaagggatgagaagtataatgtaaatttgtttgtcctcaatatgctcgaagcgctatggcaaagtctggttgttttctacatgccatattttgcatatagacaaagtacgatagatatgtctagtctgggagatctatgggcacttgcccctgtcattgttgtaaatatgctactagccatggacatctttcggtggaattggatcgtacatgcttttgtgtggggaacaatagcagcaacaaccatttgcctctttgtgatcgactccatttggtttcttcctggatatgggtaagtacttcatttccagctttcttttatttataggcgaaccctcttttttttaaaatgttttggtgctaaaaatgtagtaaccaacctgatgtttggaactggcaatggctttttaaattctttcctgcaaggcattttgtaaatttcataactgtaaatttctgaaatatgtgttaatatcagttatcctaggaagtaaaatgacttttgagcttatgcaactgttatgggaggagctcctgagtactcttttcgtactcgtaaaggaagtcgtttaggataatgtttaagtcaaaccttgggaatataaatcatgaataactctcaagtcgttgagtttgaaaatgtaaaaattatataaatagatttgtcttgaaaaatactttcataaaagtatacatatatcacttttcaataaatatttttatagaaacaagaagtcaaagttgtgttacgacttcctttatgagtacggagggagtatgtggtctctattttctcatttgtagtattttgtgttgccttgttgctgttcacgttaatccttgtagagttcttttattcctaggaggatattgagaagtagagatatattcaagtggtaactatgatttattgagagggataagtgttcagattaagatatatagaaaattaacatagatgctgctacctctcaatatctcctatgtaaaagggataaaagttgtcctgatacatagttagattaaatgcctctttctttgcaagcatgtttgtgctacatccatcatgtaatgcgagcaccatgatcatgttttcttgaatggatctcctaaagtgaaataggagttctttttgcaatttcttgattgattgcatactgactcaatataactatttcagggccatctttcatataatggggacaggtttgttttggttactgctgcttatcattgttgttgcagcaatggtaccacattttgtaatcaaggcctttacagagtattttacccccagtgatattcaagttgcccgagagatagaaaaattcgagaatgtaaatcaggtgaaccgttcagaagttccaatgacacgtctgcatgacccaaggagatag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0277600, RefSeq:Os01g0277600