Os01g0277700

From RiceWiki
Revision as of 04:34, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0277700| Description = Conserved hypothetical protein| Version = NM_001049272.1 GI:115435957 GeneID:4324269| Length = 3616 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0277700

Description

Conserved hypothetical protein

Version

NM_001049272.1 GI:115435957 GeneID:4324269

Length

3616 bp

Definition

Oryza sativa Japonica Group Os01g0277700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:9749080..9752695

Sequence Coding Region

9749146..9749338,9750763..9751090,9752151..9752355

Expression

GEO Profiles:Os01g0277700

Genome Context

<gbrowseImage1> name=NC_008394:9749080..9752695 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:9749080..9752695 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacggcggcggcggcggaggaggaggcgggttcggactgggcggcctccagtggacggcggaggaggcgtcgacgatcgggggcatcgcgacggtgtcgctgctgcactccttcatccccacgcactggctccccttctccatcgtcgcccgcgcccagcggtggccgctctcccgcaccctcctcgtcactgcatttggaggcgtccttcatgttgtttccactgctcttcttgggataactgctgttactatggcaaatactatagcaggcgaggaaacagtgcataaacttgcatcactgttgctgattgttcttggtggaagttatatcctgctgtttgcactgggaaaaggtggccatggccatgctcataatcatccaatggagaagatggcagttgcaggtcttgtacttgtacctgcattatcaccctgtgcaacaactcttccagtgtttcttgctgttggcaattcatcctccatgatgatccttgcgatcattgtgctcctctttagtaccatcacagtgatgacatccttggtggccctctcattctacggtgctagccagattaagttccactgggtggaacgttacgacaagatccttgtcggctcggtcctgtgcctcgttggggttttgacatacgtattccatcaccatgacggcgacgaacactctctccatgaacacgtgcaccggaaactcgtgggtctttag</cdnaseq>

Protein Sequence

<aaseq>MDGGGGGGGGGFGLGGLQWTAEEASTIGGIATVSLLHSFIPTHW LPFSIVARAQRWPLSRTLLVTAFGGVLHVVSTALLGITAVTMANTIAGEETVHKLASL LLIVLGGSYILLFALGKGGHGHAHNHPMEKMAVAGLVLVPALSPCATTLPVFLAVGNS SSMMILAIIVLLFSTITVMTSLVALSFYGASQIKFHWVERYDKILVGSVLCLVGVLTY VFHHHDGDEHSLHEHVHRKLVGL</aaseq>

Gene Sequence

<dnaseqindica>67..259#1684..2011#3072..3276#tgcttctcctcccagatctctctcccacaccccaccgccgccagcgacgcgaggcgggatcaggccatggacggcggcggcggcggaggaggaggcgggttcggactgggcggcctccagtggacggcggaggaggcgtcgacgatcgggggcatcgcgacggtgtcgctgctgcactccttcatccccacgcactggctccccttctccatcgtcgcccgcgcccagcggtggccgctctcccgcaccctcctcgtcagtcagtatcccccaaatttcccccccgcttccctttccccaatctcgcttctgctgtgccgctttacgctactaccgccccccccccccccccccaaagatcttcggggtcagtggtgagggggcacgcgccacatttcttgcaatggcgatactctagtttggtgtgctcgtgctgacgaatttgttgcattctaaaaaaaacccaatgttctatcgcaaaactgaagttatagtatttggattgtggctaactgcttgatgctgtgggtttcatgcaccgattagtaagtttcgcccgaaaatcttgagctgttactgacgaattggtggacaatcgagtagtctgctcatagtttgataggtaaacttctgagtcctctactgtgatcttttcagtggggatctctgttccatgggatgtatttctgtcaacaatgtgtagttatcatgttttccaacttcagggccatgcgccttttgtttcgtacataacggtagttcaggcaatacaactttcactttgtgtgactacatgggttgaatacatctaagttcggtgctgcttcgctattattatatgattgcaagatgtgtaccgtatgtgagtgcatggagttcgatttatagactgcaagcctgcaactatttgattgatccaacttggagttacacaatatcctagttgggatgttgatcaatgattaattcctgggaacaataatgcaaactgaatcaatattgcatctttctgttttgttatgctgtgaatatgttattttgtcataattacagggatatgtgtatttcatcgcaagtatggggatatttttttaaatcagaacacacagaaaatttttgattgaggtctattgctgtttatatttgtgtagattgatcattggcattggtgttcctttatcaggcttacttttctaattaatcttgtaataatatttgcagcttaccaacctgttatcccttaatcttgcacgattgttgtgatttcagtaaactacgcacaatcacttcttttttctgttcaactgtgcattatcacttggataacaaaaagtgcatttgaatgaccagactcctaactttgtagttatttttccatcctatgttgtatttattgtctgcaaacctccaaagcttactgtataattttttattaaaaaagttctaatttctaaatcttataaaataaaccttttatttctgtttgattccttgttcatgtgttactattgtgctgttagcctcagctatgatacgcgtttagaaagttacttgtattttgtaatttcatactgtaccctaccccctagtattttctacataaattagtgatgaatactcatattacttttccatgttcttattctatatatcactactaataaaatatcctaacttccgcagctgcatttggaggcgtccttcatgttgtttccactgctcttcttgggataactgctgttactatggcaaatactatagcaggcgaggaaacagtgcataaacttgcatcactgttgctgattgttcttggtggaagttatatcctgctgtttgcactgggaaaaggtggccatggccatgctcataatcatccaatggagaagatggcagttgcaggtcttgtacttgtacctgcattatcaccctgtgcaacaactcttccagtgtttcttgctgttggcaattcatcctccatgatgatccttgcgatcattgtgctcctctttaggtgggtacccctttccactgttttcagttgcattgcttgttttctaccgaacaataaattgctatacttttttttatagccgcaacacattatgaaagagggaacaataatagtttatccttccactaaaataatgggattgtcttgttgagaagtttttctaagctcttgttaggacttaggagtatcacactctaggcttataggaatctccttgtattgaaaaccctttttttcattgggtcaaatcatcaaggtatcacctaccaggctaccatagatatacaaaagcacattgagttgggacaaaatgaacatcgaaatatatccttcttagtagactgtatgttgtggtaaagtagaaagataaatactcctatacttccatgtgccacctttccttttgggatgtttctttttcctcgtttaccaactagctaatgttgtgtttataactatggattctacaaatgttttaatatttaattcacaatgaatttgctcaatatggcattctgtaacctatatgaggtgtaatatcttaagataagttatgtctcaatttaccctttagttgatgtgaaatgttcccacaaactgactgctttacatgtatggaaacaaatggtggtatttgataaatatttagtcttcaacggtgtgcctgacaagattaatagattcttaagaaccacttacattataaccctttgaatctcctgagaccctgcgtccctgccactgttatgaaccttcaagggtgggtcttagcaacacctcagttgtgaactataggtccatctctatgttgtgcactctattgggcattccggtcagtcatcttgaacacaagaatagctggattgaacgttataaaaataccttgtgcagtgcaatgtatgatcagtaagattgctgaatactagaatagctgaattgagtgtttttgtgattcaagatttcccttgtgtgctttgtgttaattggcatgtgaatagatcagatatttatcaaaatctttaccaattcttctgtttgattgtattttccccacttgcagtaccatcacagtgatgacatccttggtggccctctcattctacggtgctagccagattaagttccactgggtggaacgttacgacaagatccttgtcggctcggtcctgtgcctcgttggggttttgacatacgtattccatcaccatgacggcgacgaacactctctccatgaacacgtgcaccggaaactcgtgggtctttagagtatagtataagattgcggatgaaactttcctacacttgcgagagaaaattgtgttgttccctaaccactgtaacgggtttgctgtatacagatctgattattaatccatctgaagtcagctagccggttttctggcaatgcaaaggttgtgctgacttgtgttgtagttgcctgtacatagaggtattctatcgtttgcttatgctgttatgcacccccaaaatcagaatactacttgcaaatgggaaacatacttgaactgcatccgttgaatttggagtatttggtggtaatgcagaactggaaatcagatttgattattgcgagtgatttactgt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0277700, RefSeq:Os01g0277700