Os10g0478400

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Revision as of 08:42, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0478400| Description = Conserved hypothetical protein| Version = NM_001071397.1 GI:115482537 GeneID:4348907| Length = 1374 bp| Definition ...")
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Gene Name

Os10g0478400

Description

Conserved hypothetical protein

Version

NM_001071397.1 GI:115482537 GeneID:4348907

Length

1374 bp

Definition

Oryza sativa Japonica Group Os10g0478400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:18396371..18397744

Sequence Coding Region

18396371..18397744

Expression

GEO Profiles:Os10g0478400

Genome Context

<gbrowseImage1> name=NC_008403:18396371..18397744 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:18396371..18397744 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccggccgccgcggaccccgcgcctccgacgccaccgccgcctcctcccccgagcctggacctgcggacgggcgggcggatcctgcggcgggcggcggcgcactccctccgcccgcgctccctcccgccgctcctcctcgcggcgctcctcctcgtcctcttccgcctggcgctcgtcgccggcacgctccgcctcgcctccttcgccgaccacgacccggcgctccggtccctcctctcccgcctctccccgcccgcgccgcacgccccgccgcacccgcccccgcgccacctcccgcgccgccgctccccgttcacctcctcctcctcgtcccccccttccctctctgacgacgacttcctcgtcgggaccctcgatcccgcctcctccgccccctcccgacgccgcaacgcctcctattacgagtttctcttcactccctcctcctcctcctcatcgcccaaaccctaccccttgtcgctcccccaccgcctcccttccaccgcgatcccgttcaccttcgttgtccgtaacgagacctcgccgccgaagcccgccgcggggcgagacggcggcagtgagctccggttgctcgacctgaccaggcgtgacgccgtggccatcatcaacctcctcgcgatgctttcgtccgtgcacgtgctcgcgatcctcggctacatcaccgttcactccgtagctctgggcaccgtgttcgcgtctgtcgccgggcagcacttgcaggggcggccgcggcggtggttccatttctctggtatggctttcagggtgagacggctcactgggtttgcgttcctgcggtgggcgacgcgggacgcgatcgtgcagatgctctgcctctggttcttctccgaggtgcacgaccaggcgcagctgttcaggctctttgtcgtcgccaagctcatgcccttttcagcatctgtcaacccgtggctcgctgcgaccgttggagggccagagcttgatgggttcttcattgcgtgggctctccttgatgcggtcgtctcggtgcttttcaccgtggtgccatgggtgattgttatggaccgtgatccacgaccgcctggtcgcaatgctgtgaaggaaggatgctaccttgtgtcattgatggcaactgatgccactttgatcaaatgctggcaaacagtggtatgcggcagcatgggacagcttgccatggttacacttggtgggaaggttcttggcggatttctccactcaatcggagaggtgtacttcatggtggtgtggctgatgttctacttttcagcaaggtgtaaggaggttcggttggggggccgccattttggattggaggatgtggcagctgctcttgatgggttcaggcaatag</cdnaseq>

Protein Sequence

<aaseq>MPAAADPAPPTPPPPPPPSLDLRTGGRILRRAAAHSLRPRSLPP LLLAALLLVLFRLALVAGTLRLASFADHDPALRSLLSRLSPPAPHAPPHPPPRHLPRR RSPFTSSSSSPPSLSDDDFLVGTLDPASSAPSRRRNASYYEFLFTPSSSSSSPKPYPL SLPHRLPSTAIPFTFVVRNETSPPKPAAGRDGGSELRLLDLTRRDAVAIINLLAMLSS VHVLAILGYITVHSVALGTVFASVAGQHLQGRPRRWFHFSGMAFRVRRLTGFAFLRWA TRDAIVQMLCLWFFSEVHDQAQLFRLFVVAKLMPFSASVNPWLAATVGGPELDGFFIA WALLDAVVSVLFTVVPWVIVMDRDPRPPGRNAVKEGCYLVSLMATDATLIKCWQTVVC GSMGQLAMVTLGGKVLGGFLHSIGEVYFMVVWLMFYFSARCKEVRLGGRHFGLEDVAA ALDGFRQ</aaseq>

Gene Sequence

<dnaseqindica>1..1374#atgccggccgccgcggaccccgcgcctccgacgccaccgccgcctcctcccccgagcctggacctgcggacgggcgggcggatcctgcggcgggcggcggcgcactccctccgcccgcgctccctcccgccgctcctcctcgcggcgctcctcctcgtcctcttccgcctggcgctcgtcgccggcacgctccgcctcgcctccttcgccgaccacgacccggcgctccggtccctcctctcccgcctctccccgcccgcgccgcacgccccgccgcacccgcccccgcgccacctcccgcgccgccgctccccgttcacctcctcctcctcgtcccccccttccctctctgacgacgacttcctcgtcgggaccctcgatcccgcctcctccgccccctcccgacgccgcaacgcctcctattacgagtttctcttcactccctcctcctcctcctcatcgcccaaaccctaccccttgtcgctcccccaccgcctcccttccaccgcgatcccgttcaccttcgttgtccgtaacgagacctcgccgccgaagcccgccgcggggcgagacggcggcagtgagctccggttgctcgacctgaccaggcgtgacgccgtggccatcatcaacctcctcgcgatgctttcgtccgtgcacgtgctcgcgatcctcggctacatcaccgttcactccgtagctctgggcaccgtgttcgcgtctgtcgccgggcagcacttgcaggggcggccgcggcggtggttccatttctctggtatggctttcagggtgagacggctcactgggtttgcgttcctgcggtgggcgacgcgggacgcgatcgtgcagatgctctgcctctggttcttctccgaggtgcacgaccaggcgcagctgttcaggctctttgtcgtcgccaagctcatgcccttttcagcatctgtcaacccgtggctcgctgcgaccgttggagggccagagcttgatgggttcttcattgcgtgggctctccttgatgcggtcgtctcggtgcttttcaccgtggtgccatgggtgattgttatggaccgtgatccacgaccgcctggtcgcaatgctgtgaaggaaggatgctaccttgtgtcattgatggcaactgatgccactttgatcaaatgctggcaaacagtggtatgcggcagcatgggacagcttgccatggttacacttggtgggaaggttcttggcggatttctccactcaatcggagaggtgtacttcatggtggtgtggctgatgttctacttttcagcaaggtgtaaggaggttcggttggggggccgccattttggattggaggatgtggcagctgctcttgatgggttcaggcaatag</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0478400, RefSeq:Os10g0478400