Os01g0279100

From RiceWiki
Revision as of 04:35, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0279100| Description = Similar to Basic leucine zipper transcription factor CAT103 (Fragment)| Version = NM_001049280.1 GI:115435973 GeneID:...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0279100

Description

Similar to Basic leucine zipper transcription factor CAT103 (Fragment)

Version

NM_001049280.1 GI:115435973 GeneID:4326901

Length

2559 bp

Definition

Oryza sativa Japonica Group Os01g0279100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:9873341..9875899

Sequence Coding Region

9873379..9873849,9873949..9874013,9874206..9874533,9874636..9874734,9874957..9875220

Expression

GEO Profiles:Os01g0279100

Genome Context

<gbrowseImage1> name=NC_008394:9873341..9875899 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:9873341..9875899 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctcctccgccatggagctctccctcctcaacccggcggcaatgcgcggcctctccgccgccaagccccgcgtcgtgtcttccaggcgcatcgtgcggttccgcgtggcgtcgtcagccgcggcgccgcccgcggcgaagcccgggacgcccaagaagcgcgggaagacggagatccaggagacgctgctgacgccgcggttctacaccacggacttcgacgagatggagcggctgttcaacgccgagatcaacaagcagctcaaccaggaggagttcgacgcgctgctgcaggagttcaagacggactataaccagacccacttcgtccgcaacccggagttcaaggccgccgccgacaagatggaggggcctctcaggcagatcttcgtcgagttcctcgagcgctcctgcaccgcggagttctccgggttcctcctctacaaggagctcggccgcaggctcaagaaaacaaacccagtggtggctgagatcttctcgctcatgtccagggatgaggcccggcacgctgggttcttgaacaaggggctgtctgatttcaacttggcactggacctcgggttcttgaccaaggctaggaagtacaccttcttcaagcccaagttcatcttctacgcgacctacctgtcggagaagattgggtactggaggtacatcaccatcttcaggcacctcaaggcgaacccggagtaccaggtgtaccccatcttcaagtactttgagaactggtgccaggatgagaaccgtcacggtgatttcttctccgcgctgctcaaggcgcagccgcagttcctcaacgactggaaggccaagctctggtcacggttcttctgcctctcggtgtatgtgaccatgtacctaaatgattgccaacgtactacattctatgaagggattggtctggacaccaaagaattcgacatgcatgtgataattgagaccaaccgcacaacagcaaggattttccccgctgttcttgacgtcgagaaccctgaattcaagaggaagttagacaggatggtggagatcaacaaaaagatcattgccataggcgagtctgacgatatccccctggtgaagaacctgaagaggattcctcacgttgccgctctggtgtctgagatcattgctgcgtacctcatgcccccaatcgagtctggctctgttgatttcgctgaattcgagccccagcttgtctactga</cdnaseq>

Protein Sequence

<aaseq>MASSAMELSLLNPAAMRGLSAAKPRVVSSRRIVRFRVASSAAAP PAAKPGTPKKRGKTEIQETLLTPRFYTTDFDEMERLFNAEINKQLNQEEFDALLQEFK TDYNQTHFVRNPEFKAAADKMEGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN PVVAEIFSLMSRDEARHAGFLNKGLSDFNLALDLGFLTKARKYTFFKPKFIFYATYLS EKIGYWRYITIFRHLKANPEYQVYPIFKYFENWCQDENRHGDFFSALLKAQPQFLNDW KAKLWSRFFCLSVYVTMYLNDCQRTTFYEGIGLDTKEFDMHVIIETNRTTARIFPAVL DVENPEFKRKLDRMVEINKKIIAIGESDDIPLVKNLKRIPHVAALVSEIIAAYLMPPI ESGSVDFAEFEPQLVY</aaseq>

Gene Sequence

<dnaseqindica>39..509#609..673#866..1193#1296..1394#1617..1880#cttcttccccctcccgccccggccaggtgtttgacgaaatggcctcctccgccatggagctctccctcctcaacccggcggcaatgcgcggcctctccgccgccaagccccgcgtcgtgtcttccaggcgcatcgtgcggttccgcgtggcgtcgtcagccgcggcgccgcccgcggcgaagcccgggacgcccaagaagcgcgggaagacggagatccaggagacgctgctgacgccgcggttctacaccacggacttcgacgagatggagcggctgttcaacgccgagatcaacaagcagctcaaccaggaggagttcgacgcgctgctgcaggagttcaagacggactataaccagacccacttcgtccgcaacccggagttcaaggccgccgccgacaagatggaggggcctctcaggcagatcttcgtcgagttcctcgagcgctcctgcaccgcggagttctccgggttcctcctctacaaggagctcggccgcaggctcaaggttcgtagttgcagtctagcttcttgctttgcatttcaccgagcacctggtgggcgcttgctaatgctcctttttttttctttttttttttttttgcagaaaacaaacccagtggtggctgagatcttctcgctcatgtccagggatgaggcccggcacgctgggtaagtagtagtaacacactctaaattatttccttgcacaatgacacaatgtgattgcaagcagccattacaactcaaattgaactgtaccatgactagagaaaatatttaagcttcagttttagggcgtccatttcaactcaattgagtaagcaattcaactgaattgtctgcatgatttatgctgttcaggttcttgaacaaggggctgtctgatttcaacttggcactggacctcgggttcttgaccaaggctaggaagtacaccttcttcaagcccaagttcatcttctacgcgacctacctgtcggagaagattgggtactggaggtacatcaccatcttcaggcacctcaaggcgaacccggagtaccaggtgtaccccatcttcaagtactttgagaactggtgccaggatgagaaccgtcacggtgatttcttctccgcgctgctcaaggcgcagccgcagttcctcaacgactggaaggccaagctctggtcacggttcttctgcctctcggtaatctccgagctattccgttgtttgcatggaccaacagttcacactgaagattgttactgtgctcctcttctaacagtttttgtgtgtgatcctttgcaggtgtatgtgaccatgtacctaaatgattgccaacgtactacattctatgaagggattggtctggacaccaaagaattcgacatgcatgtgataattgaggtaagaaaatcaacttccttttcttgtttacaaaattaattatgtgccctactttactgtagtccagactgtttcagaagaattgctgaatattaaaacaatttcattatgcaatgggtgcagaccattttatgctttacttatatgcttaggagaatgtttttaatttttgtatactgaaatgaccacactgatgatacaatctgtgcatttttttggcagaccaaccgcacaacagcaaggattttccccgctgttcttgacgtcgagaaccctgaattcaagaggaagttagacaggatggtggagatcaacaaaaagatcattgccataggcgagtctgacgatatccccctggtgaagaacctgaagaggattcctcacgttgccgctctggtgtctgagatcattgctgcgtacctcatgcccccaatcgagtctggctctgttgatttcgctgaattcgagccccagcttgtctactgattctgtaggaagaccatctccagcttttttttccttcaaaaaggaatgctgatattttctgcctgaggggcttcgaacggtgagatgatgggtggttagcagaatctgcacctcgtgtgttcctttgtaaagtattgagacttcaacaatgtaccatttggcaaaggttttgttatgatctccatttaagtggcagtgaactgcatcacagtgggggttacagttttccaacagaagggtaattatatgatgttttggggttgttgatacttcatacttaagttccttagcatcctaagtatctcttagctgtgctctgcattatggcataatgtttggtcttggtgaaggtgaatagtgacgccaactactgaaaacctggacaatgcaagtgttggaagatgttgtaaatgttggatctaacatgacacgcacccacctattgttgccatagttcgtgagccgcaatctctatttttgtcggaaaggaaaagagtattaatctttactatcacgaccggagaagaatgccgttacagtgcgatatggtgccgggaacattcctgacgtgatagcacgttcaagtgatagacaaactattttttcaagcaattgcagggagtttcgatgtaatattagtagctttcatgagtttttgctatgaagcctcaacaagttg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0279100, RefSeq:Os01g0279100