Os01g0279700

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Revision as of 04:35, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0279700| Description = Major facilitator superfamily protein| Version = NM_001049284.1 GI:115435981 GeneID:4326905| Length = 3876 bp| Defi...")
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Gene Name

Os01g0279700

Description

Major facilitator superfamily protein

Version

NM_001049284.1 GI:115435981 GeneID:4326905

Length

3876 bp

Definition

Oryza sativa Japonica Group Os01g0279700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:9912346..9916221

Sequence Coding Region

9912626..9913036,9913286..9913393,9913497..9913652,9914090..9914305,9914416..9914625
,9914702..9914839,9915056..9915157,9915319..9915384,9915488..9915572
,9915668..9915765

Expression

GEO Profiles:Os01g0279700

Genome Context

<gbrowseImage1> name=NC_008394:9912346..9916221 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:9912346..9916221 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctctacctgctgccgctctccgtctcctgccgggtccccggctcgccgccggcgccgcgctcgcggcgcttcctcgaccccggcggcggccggggagttggggatgggttaggcggcgtcagggtgttccggaggcgggcgctgcgagggaccgacgtccggtcgaacacctcgtcgtcgtcgtcgcggaagggccgccacgacgacgcgcgacacgacgggggatacggcgacgacggcgacgctggggcgctgctggcgtcggtgaggaggctgctgctctccgggtcggcgcaggacgacgcggcggagggggaggcggaggaggacgagcagggtcagttccccaagcgatgggccatcgtcttcctctgcttctccgcattcctcctctgcaacatggaccgcgtaaacatgagcattgccattctgccaatgtctgcagaattcggatggaacccacaaactgttggcctcattcagtcatctttcttctggggctacctgctaactcagatagcaggaggaatctgggcagatacagttggagggaagactgtccttggcttcggcgtcatttggtggtcgatagccacagctcttacgccttttgcggcgaagctggggttaccattcctccttgtgacccgtgctttcatgggagttggtgagggagttgccatgcctgcgatgaataatattctttcgaaatgggttcctgtatcagagaggagcagatcattggctctcgtgtatagtggaatgtaccttgggtcagtgacagggcttgcattttccccattgctgatacataactttggctggccatcggtcttctactcctttgggtctctgggtgtattttggttttcgacatgggcgagcaaggcgtatagtagtccacttgaggatccaggaattagtgctgaagagaagaagcttataaccagtcaaaccacaggaggagagcctgttaaagaaattccatggggactaatattatcgaaaccccctgtttgggctcttatagtgtctcatttctgccataactggggaactttcatcttgctcacatggatgccaacatactacaaccaggttctgaaattcaacctcacagaatccggccttttctgtgttctcccctggttaacaatggcagtttctgcaaattttggtggttggatagcagatacgcttgtcagtagaggattatcagtgacaacagttcggaagatcatgcagtcaattggattcttagggcccgcattttttctgactcaactgagccatatcgattcaccagcaatggcagtgttgtgcatggcttgtagccagggaactgatgcattctcacagtccggtctatactcaaatcaccaagatatcggtcctcgatacgctggtgtactgcttggtctttctaacacggctggggttttagctggtgtgtttggcacagcggcaacaggatacatcttgcagcatggttcttgggatgatgtcttcaaagtatctgttgtgctgtatctggttgggactttggtctggaacctattctcgaccggtgaaaaaattatcgattga</cdnaseq>

Protein Sequence

<aaseq>MLYLLPLSVSCRVPGSPPAPRSRRFLDPGGGRGVGDGLGGVRVF RRRALRGTDVRSNTSSSSSRKGRHDDARHDGGYGDDGDAGALLASVRRLLLSGSAQDD AAEGEAEEDEQGQFPKRWAIVFLCFSAFLLCNMDRVNMSIAILPMSAEFGWNPQTVGL IQSSFFWGYLLTQIAGGIWADTVGGKTVLGFGVIWWSIATALTPFAAKLGLPFLLVTR AFMGVGEGVAMPAMNNILSKWVPVSERSRSLALVYSGMYLGSVTGLAFSPLLIHNFGW PSVFYSFGSLGVFWFSTWASKAYSSPLEDPGISAEEKKLITSQTTGGEPVKEIPWGLI LSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVSAN FGGWIADTLVSRGLSVTTVRKIMQSIGFLGPAFFLTQLSHIDSPAMAVLCMACSQGTD AFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSV VLYLVGTLVWNLFSTGEKIID</aaseq>

Gene Sequence

<dnaseqindica>281..691#941..1048#1152..1307#1745..1960#2071..2280#2357..2494#2711..2812#2974..3039#3143..3227#3323..3420#gtccccgggcctcgccgcgccgcgccacgccacgcctccgcccgcgttcgcactgactgacctgtcacgcgcgcgcgcgggggggagagcgcgaggaggaggagaaaagatcttcgcgcccccccgtcttgtcctctgtggagccgaggccgaggccgagctgagctgagctcgcttccgtgctcggccagcgcacccgcgcacgcaagcaagcaagcaaccgagcaagaagacctgcgctgcgcgcgcgcgcgctgacgggcggaggcgaggcgaggcgatgctctacctgctgccgctctccgtctcctgccgggtccccggctcgccgccggcgccgcgctcgcggcgcttcctcgaccccggcggcggccggggagttggggatgggttaggcggcgtcagggtgttccggaggcgggcgctgcgagggaccgacgtccggtcgaacacctcgtcgtcgtcgtcgcggaagggccgccacgacgacgcgcgacacgacgggggatacggcgacgacggcgacgctggggcgctgctggcgtcggtgaggaggctgctgctctccgggtcggcgcaggacgacgcggcggagggggaggcggaggaggacgagcagggtcagttccccaagcgatgggccatcgtcttcctctgcttctccgcattcctcctctgcaacatggaccgcgtaaaaattcctcctcccttctctaacgccctgatgaaccctagattcccccccccccccctcctcaataattccatttcgttgatattgtaaaatgcactaatgcccaaatgaaccaaagatgcagtttcttgatcggatccaaaaacataaacttgtcaaatgccgattcctaatgatgattggtagtagtatatgttaaaagcttcaattctttcttgggagattcatgctttcaacattttgcaggtaaacatgagcattgccattctgccaatgtctgcagaattcggatggaacccacaaactgttggcctcattcagtcatctttcttctggggctacctgctaactcaggtctgtgtgcagtactaatccagggaaatctgtaactaggattcatgcaagagcagtttgagttcatttggtaccccatgattctgatgtattgccattgcagatagcaggaggaatctgggcagatacagttggagggaagactgtccttggcttcggcgtcatttggtggtcgatagccacagctcttacgccttttgcggcgaagctggggttaccattcctccttgtgacccgtgctttcatgggagttggtgaggtgagcatttctaattcatattatattcatttgttatgtcatacaagttttgtgcaaatgctaatgtagagcccttatcagatgatgtctagcttctattgaactatagtcaagtgacagaacattttaagagaaaaaaaatgaatttatgttgaagttgaaaaatctggggtgccctaaaattccctttgatcgtttccacagtattgcacctttcatcatttctgttgttcagacttcttcagtgtttcaaagagtggatttcatttgtaatacaaggggtagcagaacatgcctgactaaatcacttcgcttgtaattcacaaaaagaatattaacttttttttatgcattcttagtcatggttgttttggtggtatttgatattttctatgcacctcttattgatacggtaaacatataaaatctttccccagggagttgccatgcctgcgatgaataatattctttcgaaatgggttcctgtatcagagaggagcagatcattggctctcgtgtatagtggaatgtaccttgggtcagtgacagggcttgcattttccccattgctgatacataactttggctggccatcggtcttctactcctttgggtctctgggtgtattttggttttcgacatgggcgagcaaggtatttctcggtgttctgttcaccatttcactcggaattggtgaattactgtattacttttctaatttttttttagttatctcttaaatttgtgatctgcttctataaaggcgtatagtagtccacttgaggatccaggaattagtgctgaagagaagaagcttataaccagtcaaaccacaggaggagagcctgttaaagaaattccatggggactaatattatcgaaaccccctgtttgggctcttatagtgtctcatttctgccataactggggaactttcatcttgctcacatggatgccaacatactacaaccaggtatgatcagcatcatagttttctacctgaggatcttgaaccgcaatcccttgtgtataataatatttaaaaacaggttctgaaattcaacctcacagaatccggccttttctgtgttctcccctggttaacaatggcagtttctgcaaattttggtggttggatagcagatacgcttgtcagtagaggattatcagtgacaacagttcggaaggtaaattaatcccttcagtcgtgaaatttacccatgcaatgaggtgctatcaaactccaacggaatattcaatatgaatcattgttctaccattggcaaaccatgcttgaatatgtgaatttgtgtgcggcataattaatcaacataatgcttagaagtgagaatgaagagctaaacctaattcattgtgcatgactttctatctacttcgtgcagatcatgcagtcaattggattcttagggcccgcattttttctgactcaactgagccatatcgattcaccagcaatggcagtgttgtgcatggcttgtagccaggtaaatggcagtttggcttcttgtcattttcctttattctgtcatagaacagccatatattatgtacctctttttagaacaactgtgatttgtatctgaatggccattttgagatctatctcagtatttccagcataacatgttgcatttcttattctcagggaactgatgcattctcacagtccggtctatactcaaatcaccaagatatcggtcctcgatacgctgtaatcaactctctttagcacaaaacatttcttcaaatgacgcattttcggagttctgtctgaaacattatagcttcaggtgaactcacatgttgtcttgcagggtgtactgcttggtctttctaacacggctggggttttagctggtgtgtttggcacagcggcaacaggatacatcttgcagcatggtttggcctgaaatccccatctccctagtgacataatgcacatcaattttacaatcttttacatgattttttgttgctctgtttaataaacgcaggttcttgggatgatgtcttcaaagtatctgttgtgctgtatctggttgggactttggtctggaacctattctcgaccggtgaaaaaattatcgattgatgcttgtatatagcctgcttacagttcaaaatggaaagtacatacggttcagtaactggtgagatgagaattgcattcgatcaacatccattccatgtgaagctcaactctttgcagaaacagaactacagactgcaaacttttccgcgcagcgttagacatgcaattcttggcagaagaagtttcaagtgttcgaatttttcacatgattcaggatcttcgcacaattttgcaaatgaagcatgtgcaagaggtttgagttgagcaattaccaacagccagttttttaggactctgtaagtataggtatttctgtacagcttagatgaagaatccaccatccaccgtacacccctattatttttgacttgttacacaattttcttgaacatcgtatttctgtaaagtttgtagttaacaagtttaggaattcggcaatcttacctgattcttgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0279700, RefSeq:Os01g0279700