Os01g0283100

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Revision as of 04:35, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0283100| Description = Similar to Ferripyochelin-binding protein-like| Version = NM_001049298.1 GI:115436009 GeneID:4327904| Length = 4507 ...")
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Gene Name

Os01g0283100

Description

Similar to Ferripyochelin-binding protein-like

Version

NM_001049298.1 GI:115436009 GeneID:4327904

Length

4507 bp

Definition

Oryza sativa Japonica Group Os01g0283100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:10167206..10171712

Sequence Coding Region

10167347..10167461,10169263..10169406,10170414..10170539,10170765..10170916,10171235..10171489

Expression

GEO Profiles:Os01g0283100

Genome Context

<gbrowseImage1> name=NC_008394:10167206..10171712 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:10167206..10171712 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccggcctcgggaaggccttctacgcggtagggttctggatccgggagaccggccaggccctcgaccgcctcggctgccgcctccaggggaactactacttccacgagcagctctcaaggcatcgcacacttatgaacatctttgacaaaacccctcatgttcacagagatgcatttgttgccccaagtgcatctctcattggtgatattcaagttggacaaggagcttcaatttggtatggatgcgtcttaagaggggatgcaaacaacgttcaaattggatctgggaccaatatacaagacaattctcttgtccatgtggcaaaatctaatcttagtggaaaagtctttccaaccatcattggggataacgtcacagtaggtcatagtgctgtattacaaggatgtactgttgaggacgaagcatttgttggtatgggggcgaccctgttagatggtgttgtcgtggaaaagcatgggatggttgctgctggagcccttgtaagacagaacacaaggatcccctgtggagaggtatggggaggaaaccctgccaaattcctgaggaagctcactgatgacgagattacgtttatcaaagaatcagcttctaactattccactctggcaaaggcccatgctgctgagaatgccaagcctgttgaaaagactgaatttgagaagctgttccgcaagaagtctgctcaccaggatgaggaacacgattcaatgattggtgctactcgggaggttactccggagctgacgccctcgagttctgcccaataa</cdnaseq>

Protein Sequence

<aaseq>MAGLGKAFYAVGFWIRETGQALDRLGCRLQGNYYFHEQLSRHRT LMNIFDKTPHVHRDAFVAPSASLIGDIQVGQGASIWYGCVLRGDANNVQIGSGTNIQD NSLVHVAKSNLSGKVFPTIIGDNVTVGHSAVLQGCTVEDEAFVGMGATLLDGVVVEKH GMVAAGALVRQNTRIPCGEVWGGNPAKFLRKLTDDEITFIKESASNYSTLAKAHAAEN AKPVEKTEFEKLFRKKSAHQDEEHDSMIGATREVTPELTPSSSAQ</aaseq>

Gene Sequence

<dnaseqindica>142..256#2058..2201#3209..3334#3560..3711#4030..4284#gtcgtccccgatcccctcctcctctcctctcctctccactcctcgagatctcgcaaggtcagggagccagcaaattcacccgcgattccgcgcgccgccgccgtcgccgccgccgacgtcgccgcctgggtgggggaggagatggccggcctcgggaaggccttctacgcggtagggttctggatccgggagaccggccaggccctcgaccgcctcggctgccgcctccaggggaactactacttccacgagcagcgtaagaaccctgcccctgtgcctccaatccgctctccggtcttccccccgtcgcgatagcggttctgtgagtagcgtcgatttgatcctggagtgtctccggaaacgggagagcgaatcgggggattgctgtgggtagggtttgggacgattcgctgaaatgttgtggtttgtggacacgttccctgccaggcttgggctgtcctagggttttgcgcagttagatcatcgtgcattggtttgagttgaaatggacctgcaatgttcgtttcagtgtagtttgtgaaatctagaggctgcctggtgtacagatcgtttcgtggatgctgtctgatacttgaacaggtccaatgcacgataggtgctggaagtatggagggttaactgaattagtagattcgtagatattgttgttgatcatgctctgggtataaggttttgaaagaagagattagttccccagagctagaagttaaaatctccgcgatatgttaaattttgtcatggatgatttcaataggatgctaaaggttacgtgtgatgatttggtgctcggaaagaggttggaaggagagtttaatcgctgaagtttttgttgtcactgctgagaaccaccatgttcctattagcttgtgaggatttattttacgaggtctggtgggtttcgagagttcagagcaactcttgtcttaacatggggcagaaataatgatttgttttttatattctctgtagttgtgagtgtttattgatgtttgtgacaaactggtgtttgatggcttatattcatagtgaaaatggaagaaccaacctaaaacagtcatttagatacccaattgaagcaaaaaagtataaatggtgaatttggcttgataacaatgttttcatatgattcttaattgtgtattactgtaccatgtaagcattgtttgagcctaaaaataagcactataatttcataaaccatcttggtgtaaactactatttctgagagtgattcaaatgtaactgattttttaagtttctgtttgactccctgatcatatttaatctcgtatgtgcatattatgagaccctgtcgtattctgtttgttgttaatttgtcttagtctggtggaagattttacaactataaactcagtagatcaacatgttggttgtgccattctatagtgatcccttgaaatgtctccttgtaagtaaaaaaatgttagtagcattttacctattctaattgttatgcttctgtcacttgttccttacagtctcacgcagttttgactgtacataccatcttcacgctactgcttttgctgtgcattttaatattgcctccttcctgattgctgataatattaattttggtggttctgtctatctgtggatgtcatgtgttctgcaaactgtataattatcaaaattaagacctaaaattgtatgatgtgtgccattacgctttatgagttttgtgtaacattcatgaggttgttaccataagattatcatgatactattccagtgggattaaaaggccatttctattagcagtcattcaaataccggtattacacatggttgactttgaaggcgtgaataactcaatgccattatagattgataccaaagcgtgagtacatacttatagaaacagagtcaggatgagataggaaggagtccagtgggcctacgagcatgagacagtatatgaaacattaggattctaacaaagttattagtgataactgtttgcttctgtagtaacatattgaaatgctaatatgatttccttttgagcattacagtctcaaggcatcgcacacttatgaacatctttgacaaaacccctcatgttcacagagatgcatttgttgccccaagtgcatctctcattggtgatattcaagttggacaaggagcttcaatttggtatggatgcgtcttaagaggtttgtgcttcttgctttcttatcttagttagcatcattttgcagaatcatgtaacaagtactgtggaactgttcctgtattctggtttgtctttgccaaactaaattatttaggatgcaaaaaaatattgatgtcatgttttcgtcaatgttcaagggtatcagtctatgttatttactttgtcaagatatatttatagattatctcttttgagtttttgactataaacaatcaaattatattgttcacatgaatacataacagttgatgtaaggtgaacaagcaaactgttggcataggaatagcagttagtttatcagtagcaaatttatatttgaaataatactttcagttaaatgtacgtatccatgtgccttctatgcaatgtattaggtgtttttggtgttaaatgtatgttagtaattgtgcaatatcttgacccagctaccttttttggctgacaaaaagaaatactacagtttatctaagggaaaaccattaacattttttaaaatattaagtggataaatcgcagtgatatatgtcactatatattagacccctctctgtacaaacaagccattgattgtgttaacagagctatatttccatcacacgggatgatttatgttctcatcactgcccaaactcatgtcttctctatgcagcatttgtctctcgagaacaagctagctggttctgttaccagtgctaacttaagtgacattgctacttatctggcatgtttacccagtgatacttacaatacctacaaagaaaactaagacataacagattaacagtcttgacatgtacagccaataaagacaacttttgcccatggagttagattctctgcacaacagagatatgcaaactaatttattcactcgttttaaactatgatactataatttgttgaagcttttaatatctatctatgatcctgtatttcaattgttgttacttttgttgtcaacaagtatcttgacatacttaatttcaggggatgcaaacaacgttcaaattggatctgggaccaatatacaagacaattctcttgtccatgtggcaaaatctaatcttagtggaaaagtctttccaaccatcattggggataacgtcacagtaggtaaatatgatccgtggttcttgccttacacatgtgcttcttatgatttgtttatccaatattctcgcaatatttaggttccatattttagatggtcacgatctgtttctatcattgcctagcacaagaataggcatgagcacatcttcctgcaaagatgttactcatgaaaacaatcattgtgaagttctgatgacatatacattctgaaataccacttcacaggtcatagtgctgtattacaaggatgtactgttgaggacgaagcatttgttggtatgggggcgaccctgttagatggtgttgtcgtggaaaagcatgggatggttgctgctggagcccttgtaagacagaacacaaggatcccctgtggagaggttgtgcattactctctttattacttcactttcagttttgattgttagtcaggtctcgtctaaagtttgcttcacttgattggctatttgttgttgcaattaggcacaccaaatacatgatcaccatctgtttagcgtaccaagattcaactagtttgtggaaaatacattgttttgcactatttaggtagcagttacattttgtaggtttagatgcctagacatttctgcatgggcgcaacaagaatgtgctgtgtagctcttgtttgatcgtcttatttcagtgagttctttgctgactagttatattggattcaggtatggggaggaaaccctgccaaattcctgaggaagctcactgatgacgagattacgtttatcaaagaatcagcttctaactattccactctggcaaaggcccatgctgctgagaatgccaagcctgttgaaaagactgaatttgagaagctgttccgcaagaagtctgctcaccaggatgaggaacacgattcaatgattggtgctactcgggaggttactccggagctgacgccctcgagttctgcccaataaaccttgtttctgtttttgcttctctctggtgcctttgcatcatcttatattggacagtgcaggattgttgaaggtgacactgttccatgagttcggcggtttatgtttactttcctccccaataattttgggtcgagcattgtgcaaaagctggccatgtacttcgttttctgtattccatatgtttaagatgcgctccatggaacaaagagaaccattacgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0283100, RefSeq:Os01g0283100