Os01g0289666

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Revision as of 04:35, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0289666| Description = DNA-binding WRKY domain containing protein| Version = NM_001185354.1 GI:297719842 GeneID:9272222| Length = 8497 bp| ...")
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Gene Name

Os01g0289666

Description

DNA-binding WRKY domain containing protein

Version

NM_001185354.1 GI:297719842 GeneID:9272222

Length

8497 bp

Definition

Oryza sativa Japonica Group Os01g0289666, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:10518498..10526994

Sequence Coding Region

10525956..10526756

Expression

GEO Profiles:Os01g0289666

Genome Context

<gbrowseImage1> name=NC_008394:10518498..10526994 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:10518498..10526994 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tacgctactatttatatattaaatgcatatatcatctgtgtgcaggtgcaacggtgcgccgaggacaagaccgtgctgatcaccacctacgagggcaaccacaaccaccagctgccgccggcggccaccaccatggccaacaccacctccgccgccgcggccatgctcctctccggcccggctgccagccgcgacggcgccgccgccgccctgctcggccaccaccaccaccaccacccggcggcgatgttccaccagtccttcccctacgcctccaccatggccacgctctccgcctccgcgccgttccccaccatcaccctcgacctcacgcagacgcctgccggaggcgccggcgccgccagcctgctgcacgcgctccaccgcccgccggtcatccaccctggtgcggctgcccaggcgatgccgttcgccgtgccgccgcagctggcgatgtacctcccgcagcagagggcggcggccgcggggctgggcggcgccggcgccgccaggcagccgtcggtgatggagacggtgaccgccgcgctcgccgccgacccaaacttcacgacggcgttggcggccgccatctcgtccgtcgtggcgggaggggctcatcatcaggctctgtccaccacaccccgtggcagcgccgccggcgccggagacggcaacggaaacgggagctccgccgcggccgtcgccaccggcgccgcctcgccggcggcgacggccgaggcacctgcggcgtccggatcacctcctcggctcgcgacgcagtcctgcaccacgtcgaattga</cdnaseq>

Protein Sequence

<aaseq>YATIYILNAYIICVQVQRCAEDKTVLITTYEGNHNHQLPPAATT MANTTSAAAAMLLSGPAASRDGAAAALLGHHHHHHPAAMFHQSFPYASTMATLSASAP FPTITLDLTQTPAGGAGAASLLHALHRPPVIHPGAAAQAMPFAVPPQLAMYLPQQRAA AAGLGGAGAARQPSVMETVTAALAADPNFTTALAAAISSVVAGGAHHQALSTTPRGSA AGAGDGNGNGSSAAAVATGAASPAATAEAPAASGSPPRLATQSCTTSN</aaseq>

Gene Sequence

<dnaseqindica>7459..8259#ggtgcaactttttgccatatggagctcaggccgccgccgcccaagcaccaccaccaccgccgccgtcgcggcggcggcggcgaagacggcggggaggaggaggaggaggagactggccgcctgtcgctgcgcggcggcggcttctggcggcgccacgacggggaggaggaggaggagaagggcggcgggaggaggggcgagatcaaggaggtggacttcttcttgggcgccagcggccgcgatgtcgtcgtggcctcccggcggcacgacgacggcttccgcgggacgacgcatggcggcggcggtggcggcgacgtcaacgtgagttcgccggcgttggactagagtagctgaaacttgagctcttgattgattggttgcttaattgatctgcagatcgggctagacttgctgaccaccaccaccgccggcgcggcggcgggtggtgcggcggccggcgccggcgaggaggacacggggaagaatcatagagttagttgattttgtcgatacccttgtgtactcttccattcctcttggtttttaattaaattaattgcttgttgtagcttaaattatttggtgtgatcccttgttggctgacacgtatacttatccatgtgatctagaaggaggcgacgacggcggcggtggatgtggagctccggcgagtggtggaggagaaccggcggctgcgggggatgctggacgagctcaaccggagctacagcgcgttgtaccatcagtatctgcaggtcacgcagcagcaaaaccatcgccatcctgatcatcacctgattatgaacaacaacaacaaccggccttcactagctcaagtgagtaccttagcttcttgttctacatgttattatcatcacaagcatatgcacataaaaatgttccccttaattatcccggtaaatggatgcatggatgcaccttgcttagatcttcatttcttgattcccattttgttttttcggggcaaggatttcttgattccttgattgtatttgcctttccttaattattttcaagaattcttattttgggtagtttgttcctctgttgatctttcagattcaattttaagggtatacctagccggacttttttgtgcacaattaatggtgttattggttttatccccccctggtttattatattttctgaattctcaatgcacacgtacacattggagatcgaattgtctagtgacaacaattggaaggcatgtgtagatttttccccatgatcaagatctctggtgcaataatgtacaggtcaccaaaagcacacacaccgatgtaagatcctgtagatcaaacgagcttatgtcaatgcctcggtctgctaattaattaactgattaatcttatagaagcctgacactttccaaagcaaatctttccgaacatgatggagtagaattactgaattagatattataaaatgggcatagtagttacaaacatatatgagcatgggcagagcatggcatcaactcttgatcacttgcaagtattataagcttcggggtagtatattacattatttcctccgaaactatcgggattttcccaaatactacactgtttaatccgttttaggtacttcctccgtttcacagtgtaaatcattctagcatttctcacatttatattgatgttaatgaatttaacatcaatacgaatatgaaaaatgctagaatgacttacattgtgaaacggagggagtactaaataactttggctttcattaattgtccatccgattaatcctttttgaacgataggcaggtatacgattaatcatcatcattaatgctgtagctcacaattaatcgtgtgaacaatgttccaaaagtctccaagcgttagatcccttcccaactgcttagctttgctttgctttgcagaggacggacatgtactgtacagtgacacactaacacgagagctagctagctagctaacaaagctaactactactgctacttataactgtaggagtagtagttagcgtgtgctaatctcatgcacgtaattttcatttgcccctgctcgctttcgcccttccttttgactaacgaacacaccacgtactaactacgtacttgttgatcctaccaaacatcgacgcagacacaccggaccgcggcgacgacgacggcgacgacgcagcaattcctggagccgcgagcgtcgtccacggcgcaggccaccgccgacgcggacatggcagcgtccgacgacgaggccggccgcggcggcggcgacggcgacgcgtcgtccccttcgctgagcaacgccgccggcggcggcggcggcggcaacaagatgaggagggttggtggtcaagacgagactgcggcggcggcgccggcgagggagaacggcgagcagcaggcggcggcggcggccgagctgccgtgccggaaaccgagggtgtccgtgcgtgcgcgatccgaagcaccaatggtacatatacactagtagcagtaactatgttttgattgagatgatctagctatatatatatatatatatatcatgcatgcatgtcatggcaacattatttaattttctttgatttgaacattgcctgcaatttaattcattaatttgttcagtcaaaacaaaattaaacatggccggtatagagtatagacaacagaaagcgattgattttacttctagaagtgtacacatgaaacaaattgttgttgttattgaatttacaattacaaatccaaaagatgggacgacgtacgtcgttgctagtttaattattttgaccttttgttgctcttgcattcaattaatgatgagcaactattgaactcctgcagattagtgatgggtgccaatggaggaagtacgggcagaaaatggcaaaggggaatccatgcccgcgagcgtactaccgatgcacaatggctatcggatgcccagtcaggaagcaggtaactaaattaatatatatgcattctcataatatgcgttttcttgtgtagctttaattagcatggcgctatatataaaaaccagctgaaattggaattcatatattttttaaaaaaaaattaaagatgtttgacatagtaattatattgatgtgatccatttttttggaacattgagacgcaagttaaatttatattagttatatatatcttccgttcgatctcccttttttaaaaaaaaattgtggtcgatctcactatattaatggcgctcaccacacgcaatcttcaaaaggaaaaagaattccttgggattttcttactccattaatatgtgtcttgactctttgttaacggatttctcatcttatcgataaacaaatcgttagctctccccgtcaaaaaagaaaacaaattattagctctggttacgtgttttcattgcccctcacaaactatatatctgcatatcgatcggttattcaaactggaaaatataacaagctagctagggacgtcctctttgaccggccggttaagcttaaccgatctcactacatgaaaaacggatagctgatttgatatgtgtttgcccgataaccgatctcaacacacatgcaaactggaggaccaactgattataaattgcctttaatttgatctcctacgatctttgcactgtcacacacacacacacacacacacacacacacacacacaaaagtacctgttctctgacacatatatcgattaactaagcaaggaatcatgatactgttgactttcaacacgtctagtaaatgatcgtgtaaatatcaattcatgtttatacacgtctatatatattgaagaatacttccaatagtccatatgtactgatgtgaactcatgcatccagtgagaattcagcatctctgcatccttccttgcatacgctagatatgactcctatcattgcatggacttgcatatatttatgtttctccatctatccagctagctgtatacccatagcagtactcctacataatatgcgcacacaaaactagctacgagctgtgcacacaatatatatatatgctgcgaggagacacgtatgtttccgttgttttccgtgctgacatgacgagatagaagacaagaggaaaaactatcaaatcaatttccattgtttaatactagttcatttttgtgagatatactccttccgagctgataatacttgttattttagacaaggttgatgtcaaactttaaaatctttggttatgaataatttctaaaatatttgtctttgaaatatggtgactatatatatagaatagtcttaaaaaatactttcgtaaaatcatatagttgttaacatctatatacatattataataaaaaataatggtcaaagttagtttttgaagactgtgccattatccaaaacgacaagtattattaacccgaagggagtagtacgtacgtggttataaaaataagatgccaatgcgtttttaaactttttataataagtatcggatttgctaaatgcctttagcaagaaaaaggggagtgaaatcttatggtctctggaccgttgggttcacgctaagatgttgtgtccgagatgctcctcctttagctccaaagaactcctctttctctggcgtcaaggacaccaactttgtcatagtacctatacggactagaggtttggaattgggataggggtaagaagagagagtgagttggaaaaagggaagaaaggggtatcctgtcttgaagagatggcttcgtggacaatggtcagaccaacggtgagcgacgaacacagataggtggtaaggcagtggcgctataccaccggagcagggctggagctgtggcggatccaggatttatgtgatgggtattcggaattctaaaatagcagatatatcgataccgattgacacattgaatgtacgatacattattttgatgcataatctttactacgaattgtgcgcatatataataaaatatatagaaacatttataatttcctataatcagcatcaaacatatttctattgatctaagtatgagtgaagagtaccaaagaattcggaatttttggagattgtatagcataggtcgacaactttatgtagtaaaaatattctgatttattgctaatgaaggaaaacactcataaaccacgaagaaactagtagctagcaaaggaatataacttatttccgtaggacaattgatatcaattagacaacaacatgtagagaaaaacaaatgagtgggcaatatatagatgtatatacaatttgcaaagataactatttcctccgtttcataatgtaagactttctagcagtgtccacattcatataaacgttaatgaatctagacacaaaatcttacgttatgaaacggatgaagtaggcattaaagtaattgcttattaattgccacaaccaaaatgtaaacaagaaaattaaattagcatgaatacaacccatcccgaaattgctccaggccaagcacgcttaacctcatagttctttcgcgatcagcttccggaaaaaaagttgcaacttattgatatgagtatcctatcaatcctattaagccatgtgctaggatgtcacaatatattacaaaagaaagggagggactaggaagactattgatcttattgggctgaggagagctagaaaagggtggaattgaattgttagggtataaatatcacaaatctagatagagtatggtagtacatatatattatggtcaatatatattaggtttgtgtccaaaattcatgggtattcagctgaatacccatgaattatgtgggatccgcccctgggctggaggagggcaatggacgagtcggcagagtgattaagaggcggggcagtggtgatgtctccgttggtggtgagccgccaaagaaaagggcggtggggcacctcgtcaccgctcggttgaggaggagcaggacgacatggcgttgatggtccggttgacgccttttggttttgtcaatgttaaggggcaacccgctgggcaggggaggtggcggcgatggttgaggagatggtgacgccacgacttgcgagaggaactaggggaggagagaaaatatgattagagtggtaactggtactatagctacatgaattcttggtgtgatctagaccatctaaatgtagctaattcagatgagataggcagatcaggaagtatttaacatttgagaaacgagaaccctcaaactatatatgaaaaccaacttccgaaaggagtctaatatacttgccttaattaattactccatccgttccaggttataaaacgttttgactttggaagttaaactgttttaagtttgtctaattttatagacaaatatagcaatatttataatactaaattagtgtcatcaaatcaataattaaatatattttcacaataaatttatcttgggtaaaaaatgttactacttttttctataaacttggtcaaacttaaagcagttataacctaaatcggagggagtacatagttacatgattgcatgcggccggtgatgcggtgcccgatgctgcatgcatgtatttgccttcattagtgcatgcgagaaagatgcatgtaactagcgcacacattggtaagtagcacagtaattgacatgggagtggattctaagagcaggtacaataagatggtagatgctggcgataggacgaccatgtcagtgttgatgcttagctagaggtgaaaaaggtggtgagagagattaacgggcgactaattagggcaagtgctatggtagatgtgactaccacctccaaatttatctattttattcactcatgaactaagaggcaacccatacaatgtatcacctctaacacacaaataccaatatctctaatactctcacacacttcttaaaatttgtgtggaggttgcctcttgatttaggggtggttcatcttctctctctccacttctctcctccactcatcacccaatccattgtggcattcttaggggcaacatatgagatattatagtacttgcccttagtcgctagctgctcacactatccaaggcaaagtatttaactgctgttggctgcatgctatggcaacgcaagaagctgggtggggtcacctcattctaccgcatgcatttgttcatggttgatgggaactgtgtagcaatagaagatagtagatatctattgtatgcactagctattagcactaactataatttgctgatgtggttatttttgtagcctttagctagctatttactattgaccttgctctaatcctccaggggattttcttttaaattcgatgcatgcaattagttgtgaaaaattgtgaaaaaaattgataaattagagtatagtgatatgtactaatccaaaaatcaaatttaaattagacctacacatcgagaaaaaaaaagataaattgagatacgaatagtacgctactatttatatattaaatgcatatatcatctgtgtgcaggtgcaacggtgcgccgaggacaagaccgtgctgatcaccacctacgagggcaaccacaaccaccagctgccgccggcggccaccaccatggccaacaccacctccgccgccgcggccatgctcctctccggcccggctgccagccgcgacggcgccgccgccgccctgctcggccaccaccaccaccaccacccggcggcgatgttccaccagtccttcccctacgcctccaccatggccacgctctccgcctccgcgccgttccccaccatcaccctcgacctcacgcagacgcctgccggaggcgccggcgccgccagcctgctgcacgcgctccaccgcccgccggtcatccaccctggtgcggctgcccaggcgatgccgttcgccgtgccgccgcagctggcgatgtacctcccgcagcagagggcggcggccgcggggctgggcggcgccggcgccgccaggcagccgtcggtgatggagacggtgaccgccgcgctcgccgccgacccaaacttcacgacggcgttggcggccgccatctcgtccgtcgtggcgggaggggctcatcatcaggctctgtccaccacaccccgtggcagcgccgccggcgccggagacggcaacggaaacgggagctccgccgcggccgtcgccaccggcgccgcctcgccggcggcgacggccgaggcacctgcggcgtccggatcacctcctcggctcgcgacgcagtcctgcaccacgtcgaattgatcgatcacagagacatacgtgacatatatcatatactagtatgaatcattcatgcgtgcacgcatgcgtgcatgacgcccacacatacttgacatacataccgttttttgttttgagatttgagatcgatacatatacttcttgtattatgtacagtaaaacgtatggagtaaatagtagttactagtagatgaattgattatatacacacagagttactgagaaattaattaatatc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0289666, RefSeq:Os01g0289666