Os01g0289900

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Revision as of 04:35, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0289900| Description = Transferase family protein| Version = NM_001185356.1 GI:297719846 GeneID:9268204| Length = 2047 bp| Definition = Or...")
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Gene Name

Os01g0289900

Description

Transferase family protein

Version

NM_001185356.1 GI:297719846 GeneID:9268204

Length

2047 bp

Definition

Oryza sativa Japonica Group Os01g0289900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:10536904..10538950

Sequence Coding Region

10536904..10537608,10537704..10538152,10538236..10538950

Expression

GEO Profiles:Os01g0289900

Genome Context

<gbrowseImage1> name=NC_008394:10536904..10538950 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:10536904..10538950 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcttccggtgcggaggtgagagtcgttgccgccatccgcgtcccgctcctccgccgctcgccgccgcacctcgagcagatcccgctctccctcttcgacgtctggttcttgccgcagccgccgatccaacgcctcttcctctacgacgacgacggcggcggcggtggcgccgacgactacttcccgtccctcgtcgagtcgctaaggtcgtcgctcgccgacgccgtcgcggtcttcttccccctcgccgggaagctcacgtacgtcccctccactggcgacgtcgtcgtcgactgctcgccgtccgccgtcggggacggggtcgcgttcctggaggcggagagcgacggcgacgcgcgggcgctgtcggccgccaagcggcacgacgtcccggcgttcttgcggctcgtgcccagcctggaggcccccgagctccccgcgccggtgctcgccgtgcaggtgacgcggttcgtcggcggcggggaccggggcggcgtcgcggtcggtgtggccgtgcaccacgccgtggcggatggcctgagcttctggcggttcatggacgtgtggtcggcggcggcgcgcggccggccatctccccccgcgccggtgttcgaccggtcggcgatcgtgcaccccatggccgctgacgtggcgcggcgcatcctccggaaggtgacaccggagctaccactggtaatctccatttttgtatctccccaccgcgaattggttgaggcgaacgtggcaacaccacgacacgaccacgcgccgtccgccgtcgccgacggggtcgcgttcctggaggtggaggtcgacggtggcacgccggcacggacgcccaccgagaggctcgacgtcccggcgttcttgcggctcgtgcccagcctggaggtccccgagctccccgcgccggtgctcgccgtgcaggcgacgcgcttcgtcggcggcgggggcgggggcggcgtcgcggtgggcgtggccgtgcaccacgccgtggcagacggccagagcttctggcggttcatggacgcgtggtcggcggcggcgcgcggccggccatctccccccgcgccggcgtttgaccggtcggcgatcgtgcaccccatggccgctgacatggcgcggcgcatcctccgtaagaaggcaccggagctaccactgatccccaccgcaaatctcttgagacgaacgtgggaacgtcacgtcgtgaccacgctagaactggacagccaccgcatcggccacatcaagaaccgcatcgcggagctcgacgaggcaaccacggcgagccccgggacagagcgccgcccccgccggctcccctccacgttcgtcgccgtcgcggccctcgtctggtcgtccgtcgtccgggccagggcgtcccgccagccggacgacggcgcccgcgcgcacctcgtattcccagccgactgccggcggcggctggatccgccggtcgacgcggcatacttcggcaactgcgtccggtgctgcgtcgccggggcggccgccggcgacctggccgacgcccaccgcggcgtcctgcacgcgcgcgaggcgatccgggaggcgatcgacgggttcttggagcacccgatggtggaggcgttcgacgcgtggatcgacgccgtcgccgcgctggtccggcagcccgggttcgtggccgtgaccgcgtcgccgcggtttcaggtgtacgaggtggatttgggctggggcgcgccgagccgggtggagttcgcgtcggagagtttgcccaatggcatggtggcgatgaccgccgggcggaaggaggcgagcgtgcaggtgatggcgacgctccgtccggagcatatggaggcgtttaggtcgcaacttctttactggtga</cdnaseq>

Protein Sequence

<aaseq>MASGAEVRVVAAIRVPLLRRSPPHLEQIPLSLFDVWFLPQPPIQ RLFLYDDDGGGGGADDYFPSLVESLRSSLADAVAVFFPLAGKLTYVPSTGDVVVDCSP SAVGDGVAFLEAESDGDARALSAAKRHDVPAFLRLVPSLEAPELPAPVLAVQVTRFVG GGDRGGVAVGVAVHHAVADGLSFWRFMDVWSAAARGRPSPPAPVFDRSAIVHPMAADV ARRILRKVTPELPLVISIFVSPHRELVEANVATPRHDHAPSAVADGVAFLEVEVDGGT PARTPTERLDVPAFLRLVPSLEVPELPAPVLAVQATRFVGGGGGGGVAVGVAVHHAVA DGQSFWRFMDAWSAAARGRPSPPAPAFDRSAIVHPMAADMARRILRKKAPELPLIPTA NLLRRTWERHVVTTLELDSHRIGHIKNRIAELDEATTASPGTERRPRRLPSTFVAVAA LVWSSVVRARASRQPDDGARAHLVFPADCRRRLDPPVDAAYFGNCVRCCVAGAAAGDL ADAHRGVLHAREAIREAIDGFLEHPMVEAFDAWIDAVAALVRQPGFVAVTASPRFQVY EVDLGWGAPSRVEFASESLPNGMVAMTAGRKEASVQVMATLRPEHMEAFRSQLLYW</aaseq>

Gene Sequence

<dnaseqindica>1343..2047#799..1247#1..715#atggcttccggtgcggaggtgagagtcgttgccgccatccgcgtcccgctcctccgccgctcgccgccgcacctcgagcagatcccgctctccctcttcgacgtctggttcttgccgcagccgccgatccaacgcctcttcctctacgacgacgacggcggcggcggtggcgccgacgactacttcccgtccctcgtcgagtcgctaaggtcgtcgctcgccgacgccgtcgcggtcttcttccccctcgccgggaagctcacgtacgtcccctccactggcgacgtcgtcgtcgactgctcgccgtccgccgtcggggacggggtcgcgttcctggaggcggagagcgacggcgacgcgcgggcgctgtcggccgccaagcggcacgacgtcccggcgttcttgcggctcgtgcccagcctggaggcccccgagctccccgcgccggtgctcgccgtgcaggtgacgcggttcgtcggcggcggggaccggggcggcgtcgcggtcggtgtggccgtgcaccacgccgtggcggatggcctgagcttctggcggttcatggacgtgtggtcggcggcggcgcgcggccggccatctccccccgcgccggtgttcgaccggtcggcgatcgtgcaccccatggccgctgacgtggcgcggcgcatcctccggaaggtgacaccggagctaccactggtaatctccatttttgtatgtgcgcgcgtgcattttcgacgaaaattcatcaagtcgtctgatttttaacgtgttcaactgaatttccgtaaaaatttgtagctccccaccgcgaattggttgaggcgaacgtggcaacaccacgacacgaccacgcgccgtccgccgtcgccgacggggtcgcgttcctggaggtggaggtcgacggtggcacgccggcacggacgcccaccgagaggctcgacgtcccggcgttcttgcggctcgtgcccagcctggaggtccccgagctccccgcgccggtgctcgccgtgcaggcgacgcgcttcgtcggcggcgggggcgggggcggcgtcgcggtgggcgtggccgtgcaccacgccgtggcagacggccagagcttctggcggttcatggacgcgtggtcggcggcggcgcgcggccggccatctccccccgcgccggcgtttgaccggtcggcgatcgtgcaccccatggccgctgacatggcgcggcgcatcctccgtaagaaggcaccggagctaccactggtaatgcaatttgtgatttcttttttgacaaaaaaagctcatcagaatctgtgattttttggcgtgatcaactaaatcttcatccaaatatgtagatccccaccgcaaatctcttgagacgaacgtgggaacgtcacgtcgtgaccacgctagaactggacagccaccgcatcggccacatcaagaaccgcatcgcggagctcgacgaggcaaccacggcgagccccgggacagagcgccgcccccgccggctcccctccacgttcgtcgccgtcgcggccctcgtctggtcgtccgtcgtccgggccagggcgtcccgccagccggacgacggcgcccgcgcgcacctcgtattcccagccgactgccggcggcggctggatccgccggtcgacgcggcatacttcggcaactgcgtccggtgctgcgtcgccggggcggccgccggcgacctggccgacgcccaccgcggcgtcctgcacgcgcgcgaggcgatccgggaggcgatcgacgggttcttggagcacccgatggtggaggcgttcgacgcgtggatcgacgccgtcgccgcgctggtccggcagcccgggttcgtggccgtgaccgcgtcgccgcggtttcaggtgtacgaggtggatttgggctggggcgcgccgagccgggtggagttcgcgtcggagagtttgcccaatggcatggtggcgatgaccgccgggcggaaggaggcgagcgtgcaggtgatggcgacgctccgtccggagcatatggaggcgtttaggtcgcaacttctttactggtga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0289900, RefSeq:Os01g0289900