Os01g0290000

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Revision as of 04:35, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0290000| Description = Similar to Cyprosin precursor (EC 3.4.23.-) (Fragment)| Version = NM_001049320.1 GI:115436053 GeneID:4325154| Length...")
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Gene Name

Os01g0290000

Description

Similar to Cyprosin precursor (EC 3.4.23.-) (Fragment)

Version

NM_001049320.1 GI:115436053 GeneID:4325154

Length

3644 bp

Definition

Oryza sativa Japonica Group Os01g0290000, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:10539995..10543638

Sequence Coding Region

10540402..10540486,10540602..10540690,10540780..10540899,10540987..10541128,10541235..10541299
,10541408..10541521,10541726..10541999,10542095..10542207,10542285..10542379
,10542482..10542542,10542654..10542983

Expression

GEO Profiles:Os01g0290000

Genome Context

<gbrowseImage1> name=NC_008394:10539995..10543638 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:10539995..10543638 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggacggaaccatctttgcctggtcacttgcttgtggattctgtcatgcgcagttctgcttcatgcttctcctgatggattgctgagaattagcctgaataagaagagattggacaagaagaccttggacggtgcaaaattggcaagggaggaaagccatcgtctgagagccgacggtttaggtgatgacatagttcctttggacaactacctggacacgcagtactttggagagatcggcatcggcactccaccacagaacttcactgtgatattcgacactggaagctccaacttgtgggttccatcagtgaaatgttatttttcgatagcatgctacttacaccacaggtacaagtcaaaagggtcgagcagttacaaaaagaatggagaatcttgcagcatttcctatgggtctggatcaattgctggtttcttcagtgaggatagcgtgctagttggggatcttgctgtgaaaaatcagatgttcattgagacaaccagggaaccgagccttactttcatcatcgggaagtttgatggaattcttggacttggatttccggagatctctgtgggaggagcccctccaatttggcagggaatgaaagagcagcaactgatcgagaaggatgtattctccttctggctcaaccgcgatcctgatgcaccgacagggggtgagttaatctttggtggtgtagacccaaatcattacaaggggagccatacatatgttcctgttacccgcaaaggctactggcagtttgagatgggggatcttcttattgatgactactcaactgggttctgttctggtggttgcgccgctattgcggattcagggacttcattgctcggtggcccaacaactattgttgctcaaattaatcacgcaattggagctgagggaattgttagtatggaatgcaaacaagttgtgcgggactacggggacatgatcctcgagatgctcatagcacaggcaagccccatgaaactgtgctctcagattggtctctgtgcatttgatggtactcgttctgtcagaaacaatatagagtctgttgttgataaagaaaaggtgggctcagatctttcctgcactgcttgcgagatggctgttgtctggatacagaatcagctccgacataaccaaacaagggagctcattttgcaatatgctgaccagctctgcgagcgtctcccaagccccaatggcgaatcggcagtcgactgcgatgagatctcaaacatgccgaacctttcattcaccatagcaaacaagaccttcaccttgacaccagagcagtacgtagtgaagctggagcagcaaggtcaaactgtttgcatcagcgggttcatggcgttcgacgtgccacctccacgcggcccactctggattcttggagacgtgttcatggctgcataccacactgtcttcgactttggcaaaaacaggattgggttcgccgagtctgcttga</cdnaseq>

Protein Sequence

<aaseq>MGRNHLCLVTCLWILSCAVLLHASPDGLLRISLNKKRLDKKTLD GAKLAREESHRLRADGLGDDIVPLDNYLDTQYFGEIGIGTPPQNFTVIFDTGSSNLWV PSVKCYFSIACYLHHRYKSKGSSSYKKNGESCSISYGSGSIAGFFSEDSVLVGDLAVK NQMFIETTREPSLTFIIGKFDGILGLGFPEISVGGAPPIWQGMKEQQLIEKDVFSFWL NRDPDAPTGGELIFGGVDPNHYKGSHTYVPVTRKGYWQFEMGDLLIDDYSTGFCSGGC AAIADSGTSLLGGPTTIVAQINHAIGAEGIVSMECKQVVRDYGDMILEMLIAQASPMK LCSQIGLCAFDGTRSVRNNIESVVDKEKVGSDLSCTACEMAVVWIQNQLRHNQTRELI LQYADQLCERLPSPNGESAVDCDEISNMPNLSFTIANKTFTLTPEQYVVKLEQQGQTV CISGFMAFDVPPPRGPLWILGDVFMAAYHTVFDFGKNRIGFAESA</aaseq>

Gene Sequence

<dnaseqindica>3153..3237#2949..3037#2740..2859#2511..2652#2340..2404#2118..2231#1640..1913#1432..1544#1260..1354#1097..1157#656..985#atgcgaacaacgcttttatgaatcgtctcatcttcatgtcctattactcctaccactgagagagggccactctttcccctcgagttcttcaccggcttctttcccctcctctccggaccagggaagcagctaactgtctgcgcaagaaaggtatgagtccaggttcctcttagcttcttaaattacttgcaatcaactctgcagttaagttatttgggatcctatcactctgtggtgcataattatctctactgtgatgcctcagtatgagccttaaccttgacatattggtatatcagttctttgattctcactctctttgttcttgtgaactttggtgcctttcttgatatttgtccaaggatgatggaacttcaactccatggctccatttttacatgtcaattaaatatctatgtccaatttctgaatttcctgccataatagcatatattcgacactggaagtcaaacagctcaacgtgatgaacccttcttaatgataccggtttacaatttcaagatatccatgcgctcttccttttaatttgttgtctatattttccaaatgataacctatcataggataatttgttgtctattttcccgtattctgctgattaattagcttttataccttaggtggttcaagcacgatgggacggaaccatctttgcctggtcacttgcttgtggattctgtcatgcgcagttctgcttcatgcttctcctgatggattgctgagaattagcctgaataagaagagattggacaagaagaccttggacggtgcaaaattggcaagggaggaaagccatcgtctgagagccgacggtttaggtgatgacatagttcctttggacaactacctggacacgcagtactttggagagatcggcatcggcactccaccacagaacttcactgtgatattcgacactggaagctccaacttgtgggttccatcagtgaaatgttatttttcggtaggttcatcacctaacagacttatgaaactattgtgcacgtatacagtagaaaatgactgtatttttgtaaggaagaatgtttgatgttttgatgtctatgctttccagatagcatgctacttacaccacaggtacaagtcaaaagggtcgagcagttacaaaaagaatggtatgatagatccagtggcatctcaatattgtagatccttttggcaagtaaaaccaatgtctattaagacccttatactgttattgggatttttattttcaggagaatcttgcagcatttcctatgggtctggatcaattgctggtttcttcagtgaggatagcgtgctagttggggatcttgctgtgaaaaatcaggtgacttatcgcactattgtctcagtaaaacatttagatgcatcattgttgatgctgcaggtccatttttctttcagatgttcattgagacaaccagggaaccgagccttactttcatcatcgggaagtttgatggaattcttggacttggatttccggagatctctgtgggaggagcccctccaatttggtacctactcagaccattttataaattgtgattatgtcactacctaagtgatgattatgttttaacactgttctatgtgatatggggaaaaacaggcagggaatgaaagagcagcaactgatcgagaaggatgtattctccttctggctcaaccgcgatcctgatgcaccgacagggggtgagttaatctttggtggtgtagacccaaatcattacaaggggagccatacatatgttcctgttacccgcaaaggctactggcagtttgagatgggggatcttcttattgatgactactcaactgggttctgttctggtggttgcgccgctattgcggattcagggacttcattgctcggtggcccaacagtatgtaaccttcaatctctaactaatgttatggtcctttagtgtggtactagaagttaacacaaattaacacacaaaaaaagtggtactttgcagtttctcatctaggaacgtaaaatacatcctgattgatggaatgtgcatttgaaaaatgttttgcaatcacagtacagcttacatatttgccttttctactgctgtcagactattgttgctcaaattaatcacgcaattggagctgagggaattgttagtatggaatgcaaacaagttgtgcgggactacggggacatgatcctcgagatgctcatagcacaggtttgccacttgtctgaacattggattgaatttttcttgtgatgcttcatttttttcattgatcttggattctctgaccaaatataaaataattttgtgactgagcaggcaagccccatgaaactgtgctctcagattggtctctgtgcatttgatggtactcgttctgtcaggtcagcacaacacatacatgacattttaattgccatcttaatatatctatgttcctcctttttgttccctttccatgacagacttgtttcacgaatgaatatgtagaaacaatatagagtctgttgttgataaagaaaaggtgggctcagatctttcctgcactgcttgcgagatggctgttgtctggatacagaatcagctccgacataaccaaacaagggagctcattttgcaatatgctgaccaggtaagtagtgatcattacgtcctttgctatgtcgcaccagcctttcctgattgcaaagcataacattccaatcccaatttaccgaagctctgcgagcgtctcccaagccccaatggcgaatcggcagtcgactgcgatgagatctcaaacatgccgaacctttcattcaccatagcaaacaagaccttcaccttgacaccagagcaggtggctccctcagtgacacacttggcccatcctcttaagctatactcatgcttttctaaatctcaccgtcgtcttcttcaactatgcagtacgtagtgaagctggagcagcaaggtcaaactgtttgcatcagcgggttcatggcgttcgacgtgccacctccacgcggcccactctggtacacaaattacactgtcatcaagaagcgggagctccatgttgttaggttctttgaccgtttgacgtttagcttctcgttatctgacccatcttgttgcattgcgtttttgcaggattcttggagacgtgttcatggctgcataccacactgtcttcgactttggcaaaaacaggattgggttcgccgagtctgcttgaattgcttggctagggccttcaggatcatacaacatatcaagtattgtaatgtttgttaggcagcttgtttactcggtattgtaacctgggaatgtctaaaggtatagtgcattagtagtagcatgcaaaaccttgtagaggaataaacgttttcacgatggagctgtatcagctatggatatgcagatatggatcttggatggtgcaatgcagatgtaatgagcaaatgagcacgatgagaattagggctttttaatctgatctcatcatataggtaatggtttgtctggcatataatgatgggcctaaaacttctggcgaggttaataatggctgtactgactgtttatgcaccttaacattcagagttcaaaatctctcattaaccaatttgtgatggatgcagc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0290000, RefSeq:Os01g0290000

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os01g0290000&oldid=25479"