Os01g0290100

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Revision as of 04:35, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0290100| Description = Aminotransferase, class V family protein| Version = NM_001049321.1 GI:115436055 GeneID:4325155| Length = 4075 bp| D...")
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Gene Name

Os01g0290100

Description

Aminotransferase, class V family protein

Version

NM_001049321.1 GI:115436055 GeneID:4325155

Length

4075 bp

Definition

Oryza sativa Japonica Group Os01g0290100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:10544825..10548899

Sequence Coding Region

10545115..10545132,10547158..10548588

Expression

GEO Profiles:Os01g0290100

Genome Context

<gbrowseImage1> name=NC_008394:10544825..10548899 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:10544825..10548899 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcgatcccgccggatgacgacgcggcggcggcggcggcggcgggggcggccgagaacgggtacgggaacgggaaggggaacggcaacgggccggcgccgcgcccgccgccggcgaagcggccgaggtcggtgatctcggcggcgcagatccgggcggagttcgagcaccacgaggccggggtggcgcgcgtcaacaacggcagcttcgggtgctgcccgtcctccctcctcgacgcgcaggcgcggtggcagcgcctcttcatcgcccagcccgacgacttctacttccacgccctccagccggggctccgccgctcgcgggctgccgtcgcgggcctcgtcaacgccggggacgtcgccgaggtctccctcgtcgacaacgccaccaccgccgccgccatcgtgctgcagcacgccgcgtggagcttcgccgaggggaggttctcccgcggggacgccgtgctcatgctccactacgcgtacggcgccgtcaagaagtccatccacgcctacgtcgcccgcgccggggccaccgtcgtcgaggtgccgctcccgttccccgtcgcgtccgcggacgccatcatcgccgagttccgcgccgcgctcgatgtggccaaggccggggggcgcaaggtccgcctcgcggtcatcgaccacatcacctccatgcctagcgttgtcatcccggtgaaggagctcgttgccatctgccgagaagagggtgtcgataaggtgtttatagatgccgcgcactccattgggcaggtccctgttgatgtgcgcgatattggggccgatttttacaccagcaatctccacaagtggttcttctgcccgcctgccgtggctttcttgcacacccgaaaggatgatccgatagcctcccagctccaccatcctgtggtgtcgcacgagtacggcaatgggcttcccatggagagtggatggattgggacaagggattacagtgcacagcttgtagtgcctgaatctattgattttgttaaccgatttgaaggtggcatcgagggaataaggagccgtaaccatgaaaaagtgatcgagatgggtaagatgcttgctgaggcatgggggacttttcttggcacaccaccagagctgtgcggtagcatggttatggttggtcttcccggttgccttggtgttgaaagtgatgatgatgtgatgagaatgagaacaatgttgaggaaggattttatggtggaggtgccaatatactacaattcgagaagagtagaagctcaagaaatggcaaaggataagaatggtgatgcagtcacagggtatgttaggatctcacaccaagtttacaatgtaacggaggattatgagaagctgagggatgctgtcaataagcttgttgctgatggattcaccagcagcaagttgcggccttcgcagaagcaggaaacgatggcctga</cdnaseq>

Protein Sequence

<aaseq>MASIPPDDDAAAAAAAGAAENGYGNGKGNGNGPAPRPPPAKRPR SVISAAQIRAEFEHHEAGVARVNNGSFGCCPSSLLDAQARWQRLFIAQPDDFYFHALQ PGLRRSRAAVAGLVNAGDVAEVSLVDNATTAAAIVLQHAAWSFAEGRFSRGDAVLMLH YAYGAVKKSIHAYVARAGATVVEVPLPFPVASADAIIAEFRAALDVAKAGGRKVRLAV IDHITSMPSVVIPVKELVAICREEGVDKVFIDAAHSIGQVPVDVRDIGADFYTSNLHK WFFCPPAVAFLHTRKDDPIASQLHHPVVSHEYGNGLPMESGWIGTRDYSAQLVVPESI DFVNRFEGGIEGIRSRNHEKVIEMGKMLAEAWGTFLGTPPELCGSMVMVGLPGCLGVE SDDDVMRMRTMLRKDFMVEVPIYYNSRRVEAQEMAKDKNGDAVTGYVRISHQVYNVTE DYEKLRDAVNKLVADGFTSSKLRPSQKQETMA</aaseq>

Gene Sequence

<dnaseqindica>3768..3785#312..1742#agccccagtcactgcccaggcgggcccacccccgtccacgtaagcagcagcgccggaaccacacgttaaaacaacaagcgcgcccgcgcgcggcggaggtgagagcgaccggcccgaccgagaccggtccggtcctcgcctcggccggcgcggttcgaactcgaactcgacacggctcgcgacgcgagaagcccccattcccaatccgcaaattcacttctctcctctccccaaatctccacctccaccacctctccaatccaatccaaccaaaccaaccaaccaaccctaacgcggcggcgcggcgagcgatggcgtcgatcccgccggatgacgacgcggcggcggcggcggcggcgggggcggccgagaacgggtacgggaacgggaaggggaacggcaacgggccggcgccgcgcccgccgccggcgaagcggccgaggtcggtgatctcggcggcgcagatccgggcggagttcgagcaccacgaggccggggtggcgcgcgtcaacaacggcagcttcgggtgctgcccgtcctccctcctcgacgcgcaggcgcggtggcagcgcctcttcatcgcccagcccgacgacttctacttccacgccctccagccggggctccgccgctcgcgggctgccgtcgcgggcctcgtcaacgccggggacgtcgccgaggtctccctcgtcgacaacgccaccaccgccgccgccatcgtgctgcagcacgccgcgtggagcttcgccgaggggaggttctcccgcggggacgccgtgctcatgctccactacgcgtacggcgccgtcaagaagtccatccacgcctacgtcgcccgcgccggggccaccgtcgtcgaggtgccgctcccgttccccgtcgcgtccgcggacgccatcatcgccgagttccgcgccgcgctcgatgtggccaaggccggggggcgcaaggtccgcctcgcggtcatcgaccacatcacctccatgcctagcgttgtcatcccggtgaaggagctcgttgccatctgccgagaagagggtgtcgataaggtgtttatagatgccgcgcactccattgggcaggtccctgttgatgtgcgcgatattggggccgatttttacaccagcaatctccacaagtggttcttctgcccgcctgccgtggctttcttgcacacccgaaaggatgatccgatagcctcccagctccaccatcctgtggtgtcgcacgagtacggcaatgggcttcccatggagagtggatggattgggacaagggattacagtgcacagcttgtagtgcctgaatctattgattttgttaaccgatttgaaggtggcatcgagggaataaggagccgtaaccatgaaaaagtgatcgagatgggtaagatgcttgctgaggcatgggggacttttcttggcacaccaccagagctgtgcggtagcatggttatggttggtcttcccggttgccttggtgttgaaagtgatgatgatgtgatgagaatgagaacaatgttgaggaaggattttatggtggaggtgccaatatactacaattcgagaagagtagaagctcaagaaatggcaaaggataagaatggtgatgcagtcacagggtatgttaggatctcacaccaagtttacaatgtaacggaggattatgagaagctgagggatgctgtcaataagcttgttgctgatggattcaccagcagcaagttgcggccttcgcagaaggtaccatctcgctaaagttgcattcgctttaattatttcgttttctttgtttgcttactctggttatccattgatggttgccctgactagtgtagaatttgatagatgccattacaactccatggttgttttatccactggtaatttggttactcgatatagttgcttttgagaagacatgtctttacaatccatttacattcttaggcattggttacttctgatgaacatcccaaataagcttcaggttctaaccatatatttctgaatagatttgggtttggtggtaaagagtcaagacaatctgttgcaagaaagtcactttctttttcgttcatccatgttttgtcaaatgcccacacataaagttttacggattgttccatagtcataataatttagaatttactaaggtttcattgacactaaacttcactagattttctcatcaataattgatcttatgcaagtatatggtgatctacagtagcatgggtttatctatgtatggattgtgaacattccgatggtatgcagtacgaatctttgctttatgtccatagaatgtggaaaagtttgtcaaaattgttctatgcatggttgaagccacatttttttaaaaaaataattatgtgttagcattctggtagatcaaaacaggcaaaagaggtgctgtagtactatgaagtgtcaagtaaaaatcattttaagccattttaaacatatttacttggaagtacatagtgcttactagatttctttgagcagcataactgcataagtatgtttttacctgttagtgtaatgtttgcagaatcaaaatgaactggacattttgactttttaagaggtgttgatgtaatcaagagaacaattgatattaactatcttatagaaaatacaactgatttaaaattctagaactgatcgtgtttagttgtactactccgaatgaatgattccatttctgcattagccttattatactcctgattgtatagaaacttagttctcatatggcatgaggtgtttacatcatcgaaataaaaaatttacgatgaatgctagtaatgcttactacattgggcatttatactgggactaaaatgttggtcatgatgtcataatatctttctgttttgaaattcaaaaacagctttttgtgaattattattgctggttcttgcttttgattagtgcacattgtacttaaggaggattatatttattcataaggaacagttattgtatttggatattgttctctgtgtgcataacctctgtttgtagtcttgttactggaaattagcgaaaaaagcattgtagcactccaaagcatatgcaatgattctgattcactgtttaagacctttgtgagaccctgtgttctactcaagttaggacagttgttcatttgctacaccggtaactttgctagtacctgtaagatagggagctgtgcctagaagcaaaattctgtgttattgtgcattttgtttgtggaaggttccctcactagaaaggtttaaagtattaagtttcacattcaaacctgaaaatcatctggtccttaacttatcacctgatttttgtttaagaaagtatgcaatcagcatttctaggttaatcgcctgaatatattggcttgcccaacaaactgtttattaattatgctaaattgttctagaggaaaccagagaagatgcattttctacttttattggctttatgtagtactaggtaataagggatggaatttttcttttattttgtattgcacataattgaaagcagccaaactttggtgtagcttggtccagctagtcttttttcatgaatgaaatctgtattttgtcatcagggtgccaaatgttccttaattttgttggtaaacagtctatggattgtatgggttttcttcttcacatgttgtgtatctggggctactattctaatatttcattctgacataattttgaggcaaagctataatgcgatctaattttttatgttctatggttgcagcaggaaacgatggcctgatgaacattgcagccaaccagcactctgttggaagttatgttgtggccgactacttagatgtggatcgccgtgacagccagcgctgcggtgtgatctagatttagcccgccaatggcgttgccagttcatgtagtgtactttcagaaactgacagaagtgttgtatttgcaatccgtccgtcacaataatgcactggcatgtcttcccccttaccctcattttcaagctgtaatgtaagaacaacaataatctgaatccaaggagaattgccgccgctgtagattgaattg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0290100, RefSeq:Os01g0290100