Os01g0290300

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Revision as of 04:35, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0290300| Description = Similar to Transposase (Fragment)| Version = NM_001049322.2 GI:297596577 GeneID:4325156| Length = 2896 bp| Definiti...")
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Gene Name

Os01g0290300

Description

Similar to Transposase (Fragment)

Version

NM_001049322.2 GI:297596577 GeneID:4325156

Length

2896 bp

Definition

Oryza sativa Japonica Group Os01g0290300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:10549253..10552148

Sequence Coding Region

10549253..10549285,10549712..10551811,10552026..10552148

Expression

GEO Profiles:Os01g0290300

Genome Context

<gbrowseImage1> name=NC_008394:10549253..10552148 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:10549253..10552148 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagggtgagaataatgcatcgccgcatcctccaagtttggagtcgaggagtaagcttcgtggacgacgaggaacaagcactcggtcttcatcgaatcccactgtgtccttggaagtggtgccattggagaaagtttcagaagatgaagacgatgataacagcttcaaccatagggatgatatgtctgaaagcctacctacagttgatggtggaagtggaagccagaagggtgatgatgagtttgatgatggtggatcaaaggctaagaaggcaaagacaggagggaaaaaagctggtgtcacagtgtctcccaagtgcaagatagcaagaggcaaaagagctgagtgctggaaacattttaaggttatcaatgtcccatccaagaaggagagaggtgtcatggtggcaaaggcaaagtgtaagttctgccatagaagctatgtgtatcatccaggtggtgctacaacaactctgaaccggcacctggctggttgcacacaatatcagaacaagttgacaaaggctaaagctcaaggtacactaaactttggtccagaagatgacaactctcttattgttaatcctactgagtataatcatgagcacactagagaactgattgccaagatgataattgctcatgagtattcatttcggatggtagaacataaatggtttaatatcttgatgaaatggatgaatggtaactacgagtttattggtaggaagtctataaaaaatgaatgcatgagggtttatgaatctgaaaaaaatcaactcaagaagagtttgaaagaggcagaatcaataagtttaaccactgatttatggacgtctaatcaaaaccttcagtacatgtgtttggtggcacattatatagatgagaattgggttatgcaatgccgtgtcttgaactttatcgaggtggatcctccccacactggaattgtcatagctcaggctgtttttgaatgtatggtagaatggaaaatagaagacaaggtcacaacaataactcttgataatgctacaaacaatgatactgctgttacaaatttgaaggcaaagcttcttgctagaaagaattcagtatttgatcctagttactttcatattcgttgtgctgctcacatagtcaatttggttgttaatgatggccttcaaccaatagataatttgataagttgcttgaggaacacagtgaaatactttaagaggtctccatctcgcatgtataagtttgtggaagtatgcaacaattattctgtcaaagtgggcaggggtttagctctggatgttaaaacaaggtggaattcaacttataaaatgctagatacgtgcattgactataaggatgcctttggctattacaaagaagtagacaccagctatgtttggaaaccttcagattcagattgggtctcgtttggaaaaattaggccaatattgggaacaatggcagaggctagtactgcattttctgggtcactctatccaactgccaattgtttctatccttacatagtgaaagttaagagagctttgatagaggcgcagaaatctgaagatacatatttgaggagcatgggtgctgctatgttggacaaatttgataagtattgggaggagaagaacaatgttatggttattgctacaattcttgaccctaggttcaagatgaggtacattaaatggtgttttgcacagatttttgacccaattaggtgtgaaattgagattaatgacatcaaccaagagttggaaagactctataacaagtatgagatattacatcggcaaaagatgggtgaaaatggcacgaacaggcaatcaacctcagcctcagttgatacaaccagctcaatggcttctattgcaagtgatttccagtcatttttgcaatctactgttacagaaagttcaaaatctgagctgctgatttatctagatgaagcaaatgaggccatagataacaagcatttcaacttactcagatattggaatgtgaactgtcatagatttccagttgtgtctagcttggcaaagaggttcttgactgttccagtgagcagtgtatcatcagagtgtacattcagtactgcaggtcgagttcttgatgactacagaagctctttaaagccagccacagttcaggcattagtatgtgcatctagctggataaggggcccttatgatgacaacaatcatcctcttcttgtgtcgtactttgcaatttgcatggatgatagttga</cdnaseq>

Protein Sequence

<aaseq>MEGENNASPHPPSLESRSKLRGRRGTSTRSSSNPTVSLEVVPLE KVSEDEDDDNSFNHRDDMSESLPTVDGGSGSQKGDDEFDDGGSKAKKAKTGGKKAGVT VSPKCKIARGKRAECWKHFKVINVPSKKERGVMVAKAKCKFCHRSYVYHPGGATTTLN RHLAGCTQYQNKLTKAKAQGTLNFGPEDDNSLIVNPTEYNHEHTRELIAKMIIAHEYS FRMVEHKWFNILMKWMNGNYEFIGRKSIKNECMRVYESEKNQLKKSLKEAESISLTTD LWTSNQNLQYMCLVAHYIDENWVMQCRVLNFIEVDPPHTGIVIAQAVFECMVEWKIED KVTTITLDNATNNDTAVTNLKAKLLARKNSVFDPSYFHIRCAAHIVNLVVNDGLQPID NLISCLRNTVKYFKRSPSRMYKFVEVCNNYSVKVGRGLALDVKTRWNSTYKMLDTCID YKDAFGYYKEVDTSYVWKPSDSDWVSFGKIRPILGTMAEASTAFSGSLYPTANCFYPY IVKVKRALIEAQKSEDTYLRSMGAAMLDKFDKYWEEKNNVMVIATILDPRFKMRYIKW CFAQIFDPIRCEIEINDINQELERLYNKYEILHRQKMGENGTNRQSTSASVDTTSSMA SIASDFQSFLQSTVTESSKSELLIYLDEANEAIDNKHFNLLRYWNVNCHRFPVVSSLA KRFLTVPVSSVSSECTFSTAGRVLDDYRSSLKPATVQALVCASSWIRGPYDDNNHPLL VSYFAICMDDS</aaseq>

Gene Sequence

<dnaseqindica>2864..2896#338..2437#1..123#atggagggtgagaataatgcatcgccgcatcctccaagtttggagtcgaggagtaagcttcgtggacgacgaggaacaagcactcggtcttcatcgaatcccactgtgtccttggaagtggtggtatgttatctaatttaaaattgctagttcgtacagtatagacttgaatgttgatttaattattgctatccagagtgctgtccagattatttagttacttccatgtagatgtagataatgaatttatccccaaaaatgaagaatgtcacacttaattttaatgcaatggcaacgattcagctatacattaatacatgtatatttccttatgcagccattggagaaagtttcagaagatgaagacgatgataacagcttcaaccatagggatgatatgtctgaaagcctacctacagttgatggtggaagtggaagccagaagggtgatgatgagtttgatgatggtggatcaaaggctaagaaggcaaagacaggagggaaaaaagctggtgtcacagtgtctcccaagtgcaagatagcaagaggcaaaagagctgagtgctggaaacattttaaggttatcaatgtcccatccaagaaggagagaggtgtcatggtggcaaaggcaaagtgtaagttctgccatagaagctatgtgtatcatccaggtggtgctacaacaactctgaaccggcacctggctggttgcacacaatatcagaacaagttgacaaaggctaaagctcaaggtacactaaactttggtccagaagatgacaactctcttattgttaatcctactgagtataatcatgagcacactagagaactgattgccaagatgataattgctcatgagtattcatttcggatggtagaacataaatggtttaatatcttgatgaaatggatgaatggtaactacgagtttattggtaggaagtctataaaaaatgaatgcatgagggtttatgaatctgaaaaaaatcaactcaagaagagtttgaaagaggcagaatcaataagtttaaccactgatttatggacgtctaatcaaaaccttcagtacatgtgtttggtggcacattatatagatgagaattgggttatgcaatgccgtgtcttgaactttatcgaggtggatcctccccacactggaattgtcatagctcaggctgtttttgaatgtatggtagaatggaaaatagaagacaaggtcacaacaataactcttgataatgctacaaacaatgatactgctgttacaaatttgaaggcaaagcttcttgctagaaagaattcagtatttgatcctagttactttcatattcgttgtgctgctcacatagtcaatttggttgttaatgatggccttcaaccaatagataatttgataagttgcttgaggaacacagtgaaatactttaagaggtctccatctcgcatgtataagtttgtggaagtatgcaacaattattctgtcaaagtgggcaggggtttagctctggatgttaaaacaaggtggaattcaacttataaaatgctagatacgtgcattgactataaggatgcctttggctattacaaagaagtagacaccagctatgtttggaaaccttcagattcagattgggtctcgtttggaaaaattaggccaatattgggaacaatggcagaggctagtactgcattttctgggtcactctatccaactgccaattgtttctatccttacatagtgaaagttaagagagctttgatagaggcgcagaaatctgaagatacatatttgaggagcatgggtgctgctatgttggacaaatttgataagtattgggaggagaagaacaatgttatggttattgctacaattcttgaccctaggttcaagatgaggtacattaaatggtgttttgcacagatttttgacccaattaggtgtgaaattgagattaatgacatcaaccaagagttggaaagactctataacaagtatgagatattacatcggcaaaagatgggtgaaaatggcacgaacaggcaatcaacctcagcctcagttgatacaaccagctcaatggcttctattgcaagtgatttccagtcatttttgcaatctactgttacagaaagttcaaaatctgagctgctgatttatctagatgaagcaaatgaggccatagataacaagcatttcaacttactcagatattggaatgtgaactgtcatagatttccagttgtgtctagcttggcaaagaggttcttgactgttccagtgagcagtgtatcatcagagtgtacattcagtactgcaggtcgagttcttgatgactacagaagctctttaaagccagccacagttcaggcattagtatgtgcatctagctggataaggggcccttatgatgacaacaatcatcctcttcttgtggtacaaacttgttctctctgtttgactttatttgtcttgtgacatactaatatttgtctatatttatttagattggagatggtgaagatgatgttgagtctattgaattcccaaaatgcgtggtggcaagcaattagtgtctagtgggtatatgtgcttattgtcctttttttgttatttgttggcttgttgttgttgcttatcatcttgttaacacagtgctgtttgttgtactattattgaccctataggaaagggaggaggactgaaggagagacattttgccatggatgagaagtgttaactgaccatgccttttgtgtgtttgcatggaaatacagaatgatggaacttaaacaatgtatcattctgctatgttaacttatgtagttatatttatgcgcccttcctgtctagctgatgtagtcgtactttgcaatttgcatggatgatagttga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0290300, RefSeq:Os01g0290300