Os01g0290600

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Revision as of 04:35, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0290600| Description = Aminotransferase, class V family protein| Version = NM_001049323.2 GI:297596579 GeneID:4325157| Length = 4031 bp| D...")
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Gene Name

Os01g0290600

Description

Aminotransferase, class V family protein

Version

NM_001049323.2 GI:297596579 GeneID:4325157

Length

4031 bp

Definition

Oryza sativa Japonica Group Os01g0290600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:10557022..10561052

Sequence Coding Region

10557022..10558443,10561035..10561052

Expression

GEO Profiles:Os01g0290600

Genome Context

<gbrowseImage1> name=NC_008394:10557022..10561052 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:10557022..10561052 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctcgcttcagtccggcggcgacgcggccgcgaacggcgtcgacgccgacgtcgacggcgccgcgtccccgccctcggcgaagcggccccgcgcgggcgcgggcgcggcggcgatcacggacgccgaggtccgggccgagttcgcgcaccacgaccgcgccgtggcgcgcctgaacaacggcaccttcggctgctgcccggcgtcggtgctggcggcgcgggcgcggtggcagcgcctgttcctgtcgcagcccgacgcgttctacttccaccacctccagcccgggctcgcccgctcccgcgccgcggtcgccgcggccgtcggcgccggggacgcctccgaggtctccctcgtcgacaacgtcaccacggccgccgccatcatcatgcagcacgtcgcctggagcttcgccgagggggacttcgcgcgcggggacgtcgtgctcatgttcctctacacctactgctccatcaagaactccatccacgcgtacgtggcccgcgcgggcgccaccgtcgtcgaggtgcccctcccgttccccgtctcctccccggacgccatcgtcgccgagttccgcgcggcgctcgcggtggccagggacggcggtcgccgccgcgtccgcctcgccgtcatcgaccacatcaccgccatgcccaccgtcctcatcccggtcaaggagctcgtcgccatctgccgcgaggagggcgtcgacaaggtgttcgtcgacgcggcgcacgccgtggggcaggtccccgtcgacgtgcgcgacatcggcgccgacttctacgccagcaacctccacaagtggttcttctgcccctccgccgtcgccttcatccacacgcgcaaggacgaccccgtctcctccaagctccaccaccccgtcgtctccagcgagtacggcaacggcctccccatggagagcgcctggatcggggtgcgcgactacagcgcgcagctcgtggtcccggacgtcgtcgacttcgtcaatcgcttcgacggcggcgtggaggggatacgccgccggaaccacgacaaggtggtcgagatgggcacgatgctcgccgccgcgtggggcacgttcctcggcacgccgccggagatgtgcgggagcatgctcatggtggggctgcccggctcgctgggcgtcgggagcgaggacgacgccgtcggcctgaggacgatgctgaggaagcagttcaaggtggaggtgccgctctactacaactccaaggcggcggcggcggatgcgccgccggagatggtcaaggacggcaatggcgatccggtgacggggtacgtgaggatctcgcaccaggtgtacaacgtccgggaggaatacgaggcgctcagggacgcggtcgccaagctcgtcgccgacggcttcacctgcagaaagttacggcctcctgagaaggaagaaactctggcatga</cdnaseq>

Protein Sequence

<aaseq>MASLQSGGDAAANGVDADVDGAASPPSAKRPRAGAGAAAITDAE VRAEFAHHDRAVARLNNGTFGCCPASVLAARARWQRLFLSQPDAFYFHHLQPGLARSR AAVAAAVGAGDASEVSLVDNVTTAAAIIMQHVAWSFAEGDFARGDVVLMFLYTYCSIK NSIHAYVARAGATVVEVPLPFPVSSPDAIVAEFRAALAVARDGGRRRVRLAVIDHITA MPTVLIPVKELVAICREEGVDKVFVDAAHAVGQVPVDVRDIGADFYASNLHKWFFCPS AVAFIHTRKDDPVSSKLHHPVVSSEYGNGLPMESAWIGVRDYSAQLVVPDVVDFVNRF DGGVEGIRRRNHDKVVEMGTMLAAAWGTFLGTPPEMCGSMLMVGLPGSLGVGSEDDAV GLRTMLRKQFKVEVPLYYNSKAAAADAPPEMVKDGNGDPVTGYVRISHQVYNVREEYE ALRDAVAKLVADGFTCRKLRPPEKEETLA</aaseq>

Gene Sequence

<dnaseqindica>1..1422#4014..4031#atggcctcgcttcagtccggcggcgacgcggccgcgaacggcgtcgacgccgacgtcgacggcgccgcgtccccgccctcggcgaagcggccccgcgcgggcgcgggcgcggcggcgatcacggacgccgaggtccgggccgagttcgcgcaccacgaccgcgccgtggcgcgcctgaacaacggcaccttcggctgctgcccggcgtcggtgctggcggcgcgggcgcggtggcagcgcctgttcctgtcgcagcccgacgcgttctacttccaccacctccagcccgggctcgcccgctcccgcgccgcggtcgccgcggccgtcggcgccggggacgcctccgaggtctccctcgtcgacaacgtcaccacggccgccgccatcatcatgcagcacgtcgcctggagcttcgccgagggggacttcgcgcgcggggacgtcgtgctcatgttcctctacacctactgctccatcaagaactccatccacgcgtacgtggcccgcgcgggcgccaccgtcgtcgaggtgcccctcccgttccccgtctcctccccggacgccatcgtcgccgagttccgcgcggcgctcgcggtggccagggacggcggtcgccgccgcgtccgcctcgccgtcatcgaccacatcaccgccatgcccaccgtcctcatcccggtcaaggagctcgtcgccatctgccgcgaggagggcgtcgacaaggtgttcgtcgacgcggcgcacgccgtggggcaggtccccgtcgacgtgcgcgacatcggcgccgacttctacgccagcaacctccacaagtggttcttctgcccctccgccgtcgccttcatccacacgcgcaaggacgaccccgtctcctccaagctccaccaccccgtcgtctccagcgagtacggcaacggcctccccatggagagcgcctggatcggggtgcgcgactacagcgcgcagctcgtggtcccggacgtcgtcgacttcgtcaatcgcttcgacggcggcgtggaggggatacgccgccggaaccacgacaaggtggtcgagatgggcacgatgctcgccgccgcgtggggcacgttcctcggcacgccgccggagatgtgcgggagcatgctcatggtggggctgcccggctcgctgggcgtcgggagcgaggacgacgccgtcggcctgaggacgatgctgaggaagcagttcaaggtggaggtgccgctctactacaactccaaggcggcggcggcggatgcgccgccggagatggtcaaggacggcaatggcgatccggtgacggggtacgtgaggatctcgcaccaggtgtacaacgtccgggaggaatacgaggcgctcagggacgcggtcgccaagctcgtcgccgacggcttcacctgcagaaagttacggcctcctgagaaggtacactgaactgatcatctcgctgaaacattctgtttagctgctgttttttttatttggggttaatttagttctgaattttgatggattattactgtgtaatttggtaaaaacaaattgtttgtctggaacacctggaacacatcgcgtgttctttcttgatatgcttgatgtggtagcctctaagcctttgctgggacatgtttcttcagtgatggctcaaccgccgattatacaaagctgttggattgcgaagtaccaaattattaactgaaacaatcaataattgcaattaaagtagtgcaatttgcatttaagtacttgaaatatagtttgcaatgttctatttggttttgtccatatatttaagaaattcaatgggcatatcatatgtgtaccaagacttcaagatcttcatttcactaacctatgtttatatagcaatgggaaagtgaaatcatccctcgaggggatatccccttttcgtgcatgtcacctaaatagtcatcaaaaaatatgaaaaaaattggcaacatagattaatatgaaatatatcactctacaaacacgcaagtttaaattcaacttctacaagttgtaacaaaaataacaaatacagttgtgaatataccataactattttcagtttaatttgttatttttgttgcaacttatagaagttgaatttggactttcatgtttgtggagtgatatatttcgtattaatctatgttatcaatttttttaaaattttttaataactatttagatgacatgcaaacaacgaggggatgcccccttgagggatgaaaatccacatcctatagtaattgccaaattgctaccatagaaaggcttaccttggaaccacagtattcacagctcacactccgcaatttacatgagagacaatttgtttttatatcgatggactctgtcgcaccggacaagtatagaacatatgacggtttgtcagcatatagatttcttttgcacgattgaaagttcgaaatcatactttacgttagagatgtttctgttgcatacttctatgagatcagagattgttggcatagcaccacgaatacgatgacagatgtccgatgcgaaacggtggaaggccactcacccgtatctagaactatttgcctcattatactgtattacacaatcgatctgttgctgttttactacctactactccctccgtttcgaaatatttgacactgttgactttttagcacatgtttgatcattcgtcttattaaaaaacttttatgaaatatgtaaaattatatacctacataaaaatatatttaacaataaatcaaatgataggaaaagaattaataattacttaaattttttgaataagacaagcagtcaaacatgtgataaaaagtcaacggcgccaaacatttcgaaacggagggagtattaaacaatttggaagtaacagtgattctgtacttgtgatggaaagatgccctggacttccactagcaatacagggtctgggtgttcagttttcggtccaaaagcatatggttgtgcctgatgataaggctgccagttgccacgaggaatatggagatttgctcaaagcattcttggaagcttttgtcctctcatcagtagtgctcacggcatggagcgcttaaaactttttctgcttttgattgttgctttgttctggttcgcaaagggaataattaacattagaaagttgatgaatgcttttatggaaggattaaggttacattgtgtttgttgggctgcgcatctatgaagatatgtgtgtgtgtgaccactgaccaggcccatacatgatacattccctatggaaggattcgttggaaattccccaccagagttcttcaacatcgcacatgacaaaactttctgaattctatggtttaaaatcttaagtctagtgtttctatggaaggagcaaggcgcatgtgacaaactttatgattcattgatttttaaaatctcgtcttctactcaagttagaaacatgtacattcattttctgtgcatcatggataatgttgcagagaaatatagaattttattgttcgctgtgataatgaaaagattctcactagaacggggcaaggccacaaattttcatgccaaactaaaccagcttctcattcagatcatcttgggtattacactctggtttctatgcatttcctagttctattcttctttttcttcttcttttttttttttggcaagaatagttttattcatcttactgtctttactacaacttcaatgacaaaagacgacctgtttgagtactctttttttatcctcatgcaaaatttcaaatagccgtgagcttggtaaaaactttgcttgtataaatgcagtttactttgtgagtttgtggtggcactgcattgtgtattctggtgcagtttctgatagcaactatcacgttctctgtgattcttctcacaactaacccttactctagccattgacatatatgcaagtggttgaaacaaactattatggctaatcacactgtagtcagtagtactaactttcatgtgcctatcgattgttgaatgcaggaagaaactctggcatga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0290600, RefSeq:Os01g0290600