Os01g0292200

From RiceWiki
Revision as of 04:35, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0292200| Description = Protein kinase-like domain containing protein| Version = NM_001049327.1 GI:115436067 GeneID:4325161| Length = 4582 b...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0292200

Description

Protein kinase-like domain containing protein

Version

NM_001049327.1 GI:115436067 GeneID:4325161

Length

4582 bp

Definition

Oryza sativa Japonica Group Os01g0292200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:10670907..10675488

Sequence Coding Region

10671114..10671302,10671392..10671454,10673043..10673114,10673215..10673322,10673495..10673575
,10673660..10673713,10673801..10673926,10674019..10674225,10674337..10674438
,10674591..10674707,10674810..10674881,10674976..10675050,10675177..10675296

Expression

GEO Profiles:Os01g0292200

Genome Context

<gbrowseImage1> name=NC_008394:10670907..10675488 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:10670907..10675488 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgaacggagaggcggaggcggagtgcacgcgggcgtcgctgctggggaggtatgagatcgggcgcacgctcggggagggcaacttcggcaaggtcaagtacgcgcgccacctcgccaccggcgcccacttcgccatcaagatcctcgaccgcaacaagatcctctccctccgcttcgacgaccagataaggagggagattgggacgctcaagctgctcaagcaccccaacgtcgtccgcctgcacgaggtggctgctagcaaaactaagatttacatggtgcttgaatatgtcaatggaggcgagctctttgacaagattgccgtaaaaggaaaactctctgaacatgaaggaaggagacttttccagcagttaatcgatgctgtgagctattgccatgataaaggtgtctaccacagagaccttaagcccgaaaatgttcttgtggatcgaagaggcaatatcaagatctctgactttggcctaagtgctttgcctcaacatcttgggaatgatggattgctgcacacaacatgtggcagccccaattatattgctcctgaggttttgcagaaccgaggttacgatggctcattgtcagatatctggtcttgtggagtaattctctatgtaatgctcgtcggataccttccctttgatgaccgaaatcttgttgtcctgtaccagaagattttcaagggggacactcaaatcccaaagtggctttcacctagtgcacgggatcttcttcgaaggattcttgaaccgaacccgatgaagaggatcaacatagcagggatcaaagagcatgagtggtttcagaaggattacactcctgttgttccatatgacgacgatgatgacaattatcttgactcagttcttccaatcaaagagcaaattgatgaagcaaagcaggaaaagcctactcatatcaatgcttttcagttgattggaatggcttctgcccttgatctttcaggtttctttgaggaagaggatgcgtctcaaagaaagataaggttcacatcaacacattcaccaaaagatttattcgacaagattgagaatgttgtgacggagatgggattccaagtccagaggggtaatagcaagctaaaggtcatgaaaaatggcaggggttcaaagaacctcaggaatccatcatcattcttggtctgtactgaggtagtcgagctcgggccatccttatatgttgtcgaattgaagaaatcccatggagatcctatattgtatagacagctatgtgagaggctatcagatgagctaggagtgtgcaagacagagcagattcagaggacggagtcgctggaggatgatctagagagcttcgacagcggatcttctctgcctggtttttga</cdnaseq>

Protein Sequence

<aaseq>MVNGEAEAECTRASLLGRYEIGRTLGEGNFGKVKYARHLATGAH FAIKILDRNKILSLRFDDQIRREIGTLKLLKHPNVVRLHEVAASKTKIYMVLEYVNGG ELFDKIAVKGKLSEHEGRRLFQQLIDAVSYCHDKGVYHRDLKPENVLVDRRGNIKISD FGLSALPQHLGNDGLLHTTCGSPNYIAPEVLQNRGYDGSLSDIWSCGVILYVMLVGYL PFDDRNLVVLYQKIFKGDTQIPKWLSPSARDLLRRILEPNPMKRINIAGIKEHEWFQK DYTPVVPYDDDDDNYLDSVLPIKEQIDEAKQEKPTHINAFQLIGMASALDLSGFFEEE DASQRKIRFTSTHSPKDLFDKIENVVTEMGFQVQRGNSKLKVMKNGRGSKNLRNPSSF LVCTEVVELGPSLYVVELKKSHGDPILYRQLCERLSDELGVCKTEQIQRTESLEDDLE SFDSGSSLPGF</aaseq>

Gene Sequence

<dnaseqindica>208..396#486..548#2137..2208#2309..2416#2589..2669#2754..2807#2895..3020#3113..3319#3431..3532#3685..3801#3904..3975#4070..4144#4271..4390#gttcattcctctccccccccccccctgaacccggccaactccggcgagagagacatagatagcgtgtgagacagtataaagatagagagggagaggtagttttttgttgccggcttgcggatttattgtaggagatcaggtcagtttcgttttcttgccggcgcggcgggcgtttgttgggtgcggcgggcggggaggagctcgtgaatggtgaacggagaggcggaggcggagtgcacgcgggcgtcgctgctggggaggtatgagatcgggcgcacgctcggggagggcaacttcggcaaggtcaagtacgcgcgccacctcgccaccggcgcccacttcgccatcaagatcctcgaccgcaacaagatcctctccctccgcttcgacgaccaggtatttgctccctctaatcccatccgcgcctcaccggaatcgctcgcgctcatcatctgtgttgttttggtttggtttgggatgttcagataaggagggagattgggacgctcaagctgctcaagcaccccaacgtcgtccgcctgcacgaggtaacgtctccactactctccgatcatcaccaccctctggctttttttctgcctctttttctcgattttctttcctggattttgtttcattctggacgagttcatcgtcaggttctcaacttccccacgagtcctgacaattttttttttcacacgagacctgacacttggccggttacctacagtagctgcttacttacaaggcaaagaaacatttcgattctagtagtttagtttaaccaccaggataaggatcaatcctcacaaactctttcttgatctcctcgcctcttttgagaagcaaactaattacgcaatgcaaaagcatcaccaccgcctcacgtcatgccacctcgccgccggcggttcacccctcgccgccgccgccgtagccgccgtcaaacttcgattgatcatcacggacagtccacgccgcgttctccgtgtgattcagcctctcgcgtgtttatacgcaacgaatgaatccatcaccggtcaatctggaacacgaattttcttctgattaaaaattttcagggagcgacaagaatttcgtcagagcttttccttctcctcatacatgacctcacgttctctctctctctctcccccccccccccccccccgaaaaatcagcaccgtgtcgaatgaaaggcgcctgatacgtccacgtcacccggattccgcgaaccgacggctccgatggaatcccccccgtatcctcacaggagcgaggggccccaccctggcgtttactcacattccttgcctgcctcttggtctacccgtcgaggcatgtggtggtgggcccggtaggccggcccctcggccctgctggagctgggcccacggtgtcagcgtcacgggctgtctctgtccgggtgcttttagcccagagtgcaacgtccccgtaagcccgggcgcgccgcaccaccaccacccaagtcacccaccgtgtgggcccagcagacttggcaacgcgcggggcccgcacacgtgtgtccggtgacggggcccaccgtgccatccttccctgtgggcccacaagaacagttagaggaggtcagggtgggggggggggggggggagggacgcatgatgaatggagatgatgggggagatgaacagtgtggtgatagaaatttgagaggagcaagcaatcaaagcatcgaactgctctcacctaacgatggcagttcttgtcatatggttgcattaccagaacggcgatgctcgtacccataatgtgacatctaagtacacaaaaacagtacataatctgatttgttggtgataacaattatggtaataatgctttttcttgagtcatatgatgcaagcagcaaggactgagaattggcaaaagtagaggttgtcatggtgcacagatatctgttgttgtcgtagtaaacgagtggtgttagcaagggaacaaaaaagacgttttgtcgttgctctttagttgaacatgcagttcttcagggaggtccatttgggtttcttgagaacagttctgatctgcgtaatttgcccagatgaagaaccagtgagtgatcatggaattgatatattgtttttcttttttcaggtggctgctagcaaaactaagatttacatggtgcttgaatatgtcaatggaggcgagctctttgacaagattgtaagatatgcaagccttgttggtgctgttgctttttcgtgtaaaaattgctcgtatcttgttaatactgatattttttttccattgctaatttttgaaggccgtaaaaggaaaactctctgaacatgaaggaaggagacttttccagcagttaatcgatgctgtgagctattgccatgataaaggtgtctaccacagagaccttaaggtacccgacataaatattttcagctttttacatgatggatgcctgagttacattctaatacgcaattgtaatcagatttattttcttgctcatactcatcgcaatcaaactaaactagagaattatatgattctcctgtgacagaattttcttctttattctactcttacagcccgaaaatgttcttgtggatcgaagaggcaatatcaagatctctgactttggcctaagtgctttgcctcaacatcttggggtatgataatgatttgattgaattttgttctatataaatcacctgttgtgcaatttgctgaatcatttgcactcccactttcagaatgatggattgctgcacacaacatgtggcagccccaattatattgctcctgaggtaataactgataactgaaaataatctgaaactagtaacatctttcatttctcctgcagatgctaattctgtagcgaatccatgcaggttttgcagaaccgaggttacgatggctcattgtcagatatctggtcttgtggagtaattctctatgtaatgctcgtcggataccttccctttgatgaccgaaatcttgttgtcctgtaccagaaggttggttgcaagataaagcatctttacaactttgctcacaaatttcaaatttcagactgtcctgatagtgcgaaattgtcatgtatctttagattttcaagggggacactcaaatcccaaagtggctttcacctagtgcacgggatcttcttcgaaggattcttgaaccgaacccgatgaagaggatcaacatagcagggatcaaagagcatgagtggtttcagaaggattacactcctgttgttccatatgacgacgatgatgacaattatcttgactcagttcttccaatcaaagaggtattcgtagttttctgaaaaactgtagaaattattaggaaactaacgagtacttgtttctcagtatttgttgatgctgaatttctgattggtaatttctgtttcttgaagcaaattgatgaagcaaagcaggaaaagcctactcatatcaatgcttttcagttgattggaatggcttctgcccttgatctttcaggtttctttgaggaagaggttcgtatgatgttttctcattctagacttctttcatacttttcagttatttatcagaacaagactatgtgtagtgtaacttacaatcttacaacaattttccgaatgaacctatcctaagctgcctggtgctaattgatggattattgcaggatgcgtctcaaagaaagataaggttcacatcaacacattcaccaaaagatttattcgacaagattgagaatgttgtgacggagatgggattccaagtccagaggggtaatagcaaggtagatataccaaggcctttttctcatcacatcatcgtattgtcagggaagaaacaacagctccagtaaaccaaaagcctaaaatcatgtttctctttgcagctaaaggtcatgaaaaatggcaggggttcaaagaacctcaggaatccatcatcattcttggtctgtactgaggtaaaatgccacagcacactcctttcttgtgcaatgtacattcaggaaggattgcatatcagctggtacttacatcatcactcttgatcttcaggtagtcgagctcgggccatccttatatgttgtcgaattgaagaaatcccatggagatcctatattgtatagacaggtaccataccaatgaacagccttactttctatcaccggcaacttcagtattctatctttcagtgattcagtgatatgtgtggtatcgcatcatctcagtagtttgtttcctgaaataattctgcagctatgtgagaggctatcagatgagctaggagtgtgcaagacagagcagattcagaggacggagtcgctggaggatgatctagagagcttcgacagcggatcttctctgcctggtttttgaagaattgccgccctggatcattttggttagagttagaggaacatgctctgttcttcatacaagcgtaggttaggatgttgtatagtgtacaaagtgagtggtgcaagttagccaccgatgtttaatataaggattgctctcttcttgcccgtctgttggcccaattctttcccataatgaaatgaaatcatc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0292200, RefSeq:Os01g0292200