Os10g0479600

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Revision as of 08:42, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0479600| Description = Protein Transporter, Pam16 family protein| Version = NM_001071404.1 GI:115482551 GeneID:4348915| Length = 2729 bp| ...")
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Gene Name

Os10g0479600

Description

Protein Transporter, Pam16 family protein

Version

NM_001071404.1 GI:115482551 GeneID:4348915

Length

2729 bp

Definition

Oryza sativa Japonica Group Os10g0479600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:18464185..18466913

Sequence Coding Region

18464234..18464236,18465016..18465103,18466189..18466319,18466443..18466571

Expression

GEO Profiles:Os10g0479600

Genome Context

<gbrowseImage1> name=NC_008403:18464185..18466913 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:18464185..18466913 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagggaagcttattgcaaacttgattgtcatgggctctgggattataggaagagctatgctccaagcataccggaaagcacttgataatgcaaataaaactggtgtggcccatgaaacaattaataacattcgtagagccagcaaaacaatgactgagcaagaagctaggcagatactcggtgtatctgagcagtcaacttgggaagagattgcacagcgctatgataatttatttgaaagaaatgcaaaatctgggagcttttatcttcagtcgaaggtccaccgagcaaaggaatgcctagagaatgtgtaccaaaagaataagcaagatggaacaccaccttga</cdnaseq>

Protein Sequence

<aaseq>MAGKLIANLIVMGSGIIGRAMLQAYRKALDNANKTGVAHETINN IRRASKTMTEQEARQILGVSEQSTWEEIAQRYDNLFERNAKSGSFYLQSKVHRAKECL ENVYQKNKQDGTPP</aaseq>

Gene Sequence

<dnaseqindica>50..52#832..919#2005..2135#2259..2387#ctcagctgcgcaatcccacggccgccgccgccgccgccgcctgtccgccatggtgagttcccctcgcatccctcaccccttcctcctcgcccccatcccgctcggcgcgcgcgcgatgctgctctgattttgttttttgtttttttgttttttttttgtgttgttttgggagaagtagagacccgtggatgggtggatgctgaggccggattcgattggcttgattcggggctcctcgatgggcgacacgccgcctgtgtaagatcacgggttaaatttcctcgtgtggttggtgtaatcgctcgattcgatacgcatgagggaatggatcgcggtttcgcggggtaggggagtggaagaacagcatgcgatcccgggggctcagtttgccagatttctccaggggaaaaataattttcgaatataaaccggcacagggatttgcctgtttttatacttggatcgcaccttgctttcgtttgttagatttggcagtacaaacgaagtcaaaccgcatcagcaaatgatttggtctgtgcaagctgccgaattacggcatcgcgttgtgataattagagacttcgctcttcaattattttgtggtaactagtttctgcgaccgctgtggcgtggtatcgtgcccgtaggtttgattggaatggattggctttgcttcatggttgatttggcattggatatgttgcgaaatgtcctcccccttccaaggaccagtgttgaaagcatacatatccaaaaaaaatccaaatgcatgaactactgctattttgagttgtgccacttatttacatagttttgctttttgatttacaggcagggaagcttattgcaaacttgattgtcatgggctctgggattataggaagagctatgctccaagcataccggaaagcacttgatagtaagttttttcatccattgcagtctgtatatagaggctacctctttgttccttgactgagtagatagaaacatgagatgtggattgatatcagcaaacttttgtgaaaagaccgcttacgtggagcaacaatcgctcaaaaactaaaatggacggtaattttgcattttgttatatactgcaccaagttctataaaatgaaccataaacgatgttatcaaatacttagtaattaaaattccttatattgacattgtcttgtcaaataattattaattaaaattcctcatattgtcattgtccaagtaagatatgaccctgttttatagatgcttgcatttggactataacttttttggtattacttacacatataacgctatctccctcaatatcaatttggttttatgttgcctgttgctcatgagatttgttgtttgatttcttctcacatgcgagacatatttatgatacatggatgtctagcatctaggggcttaaaactgtcataacaagtttgaactttcattgtttactaatatcattctgtgctagctacttacaagttgggtccacttatgttttaacaatttggtacctgcagttaagtcagttcttcggttttatgattttatgaagaaatggatatctttgtttttttgcctaacttatggtagattttaaagaagtaccataaaggcacaaactctattttactagttttaatggtacttgtttgcctggattttatttacctaatttgaacataaatgtcctctgcaatacaatgatacagaactcacctctgtgttatctaagaactctgatttgcataattatgagatcaggccaactatatatctgattagcttgtatctaaagttttacaactctaaaaacatgttcacaactaacttctgaatatcagaaaatggaaatacgttagtacttattaatagccaccacaagacaaatatgacctttcttaatattttcctgccaaatctttgactgtaggagaattgttattattcttttttgaaagaaggatgacttatgttagttttcctcctatattctgccagatgcaaataaaactggtgtggcccatgaaacaattaataacattcgtagagccagcaaaacaatgactgagcaagaagctaggcagatactcggtgtatctgagcagtcaacttgggaagagattgcacaggtctgctacttggcttcttcttctttttttttttgggggggggggggggtggtcgcagcgctcctaaaaaaatcatttgattatgattcgactatcctaacaaatatattttaaaaattgcagcgctatgataatttatttgaaagaaatgcaaaatctgggagcttttatcttcagtcgaaggtccaccgagcaaaggaatgcctagagaatgtgtaccaaaagaataagcaagatggaacaccaccttgaaatttgcagtccttgaaaaatcatcttttcagatatattctttcccactcataagagaagtgtacataccagaattggtcgctgctgttgtatcattacacgtagtggaatcaataagaatcaaagtgcagcgagaccttggaattgtggaaaactgttttatgaggtttcaataaactctagcatgaagtacgattttgttcttttgatttgaccttaggaaacaatgcaaattttgtcatcttggtggctgctagttaggtttaaacatttgaacatgtactgtccctcatcaaagtttggcattgcagttaggctgccagatggaccaatgttgaaaac</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0479600, RefSeq:Os10g0479600