Os01g0293200

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Revision as of 04:36, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0293200| Description = Protein of unknown function DUF860, plant family protein| Version = NM_001049331.2 GI:297596586 GeneID:4326712| Leng...")
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Gene Name

Os01g0293200

Description

Protein of unknown function DUF860, plant family protein

Version

NM_001049331.2 GI:297596586 GeneID:4326712

Length

2922 bp

Definition

Oryza sativa Japonica Group Os01g0293200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:10723144..10726065

Sequence Coding Region

10723144..10724390,10725759..10726065

Expression

GEO Profiles:Os01g0293200

Genome Context

<gbrowseImage1> name=NC_008394:10723144..10726065 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:10723144..10726065 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcttcttccggccgccgccgccgctgccggcggcgtccaccgcctcaaatctctctgccccgtgcgccgcatctcctccctcaaggttccctggcgccgcgacgccgccctcgacgccgccatcctccgcgaccgacggtaccgcctcgcctcccgcctcgtccgcgaggtgctcctctccccgggccgccgcctcctcctccgctacctctccaagcgccggcaacgaatccgcctcccggtgctcgtcccgaccttcctccgccggtaccccaccctcctctccgtctcccctccccccaaccccgtcgcctccccttccccgcacctcctctccttcctcgagttcgcctcacgccaccacgcgctccactcgccgctcctcgcctccaggctcgccaagctcctcatgatctcctccacccgcgccctccccgtccccaagattgccgccgccaagcgcgatttcggcctccccgacgatttcctgacctcgctggtcccgaggtaccctcacctcttccgccttgttggagatccggggcctgacgcgtccggcaacgcgtttcttgagctggtttcgtgggatgatcagctggcgaagtcggtgattgaattgagggctgacaaggaggccgatgtggttggcattcggccgaggccgaattttacggttaaattgccgaggggattctatctcaagaaggagatgagggagtgggtgagggattggcttgagttgccatatgtatcgccctacgccgatacgtctgggcttcacccggcgtcaccggaagcagagaagaggttgattggtgttttacatgaggttttatccttgtctgtagagcggaggatggctgtaccaattatagggaagttctgtgatgagtttaggctgtcaaatgcgtttgctaatgcgttcacgagacatccggggatattctatgtgtcgttgaagggtgggatcaagacggcggtgttgagggaagcatatgatgagaatggcgagcttgttgataaggatccaatgattgagctgaaggagaggtttgtggcaatcatggatgaggggcatagagagtatttggaggagttgaggaagaagagggaagagttggagaaacagagactgcaggaggcttataggggtgccaaagttggcacaggtattgaggatgagatggaggaggaaggcactgatgagtcagatgaagatgatgattcagaagaaggagaggccctatttacctttgtacccctggccgtctcgctggcccgagcagtacccaaaaccctatcactaatccccacccccggtggcggcggtgtcccggccaggagcagccagccacgggcaggaggccacggtggggctgctggccccgtcggcggtgtctgggctgggagcaggcggtggcgcacaggaagccattgtggcgagcgggaggccacggcggcgtggcagggagcaggaggccagcagctgcacgcaggggctgtggcacgcgggaagcaggcaagcaagcatatttgtatcagctgctcatag</cdnaseq>

Protein Sequence

<aaseq>MLLPAAAAAAGGVHRLKSLCPVRRISSLKVPWRRDAALDAAILR DRRYRLASRLVREVLLSPGRRLLLRYLSKRRQRIRLPVLVPTFLRRYPTLLSVSPPPN PVASPSPHLLSFLEFASRHHALHSPLLASRLAKLLMISSTRALPVPKIAAAKRDFGLP DDFLTSLVPRYPHLFRLVGDPGPDASGNAFLELVSWDDQLAKSVIELRADKEADVVGI RPRPNFTVKLPRGFYLKKEMREWVRDWLELPYVSPYADTSGLHPASPEAEKRLIGVLH EVLSLSVERRMAVPIIGKFCDEFRLSNAFANAFTRHPGIFYVSLKGGIKTAVLREAYD ENGELVDKDPMIELKERFVAIMDEGHREYLEELRKKREELEKQRLQEAYRGAKVGTGI EDEMEEEGTDESDEDDDSEEGEALFTFVPLAVSLARAVPKTLSLIPTPGGGGVPARSS QPRAGGHGGAAGPVGGVWAGSRRWRTGSHCGEREATAAWQGAGGQQLHAGAVARGKQA SKHICISCS</aaseq>

Gene Sequence

<dnaseqindica>1..1247#2616..2922#atgcttcttccggccgccgccgccgctgccggcggcgtccaccgcctcaaatctctctgccccgtgcgccgcatctcctccctcaaggttccctggcgccgcgacgccgccctcgacgccgccatcctccgcgaccgacggtaccgcctcgcctcccgcctcgtccgcgaggtgctcctctccccgggccgccgcctcctcctccgctacctctccaagcgccggcaacgaatccgcctcccggtgctcgtcccgaccttcctccgccggtaccccaccctcctctccgtctcccctccccccaaccccgtcgcctccccttccccgcacctcctctccttcctcgagttcgcctcacgccaccacgcgctccactcgccgctcctcgcctccaggctcgccaagctcctcatgatctcctccacccgcgccctccccgtccccaagattgccgccgccaagcgcgatttcggcctccccgacgatttcctgacctcgctggtcccgaggtaccctcacctcttccgccttgttggagatccggggcctgacgcgtccggcaacgcgtttcttgagctggtttcgtgggatgatcagctggcgaagtcggtgattgaattgagggctgacaaggaggccgatgtggttggcattcggccgaggccgaattttacggttaaattgccgaggggattctatctcaagaaggagatgagggagtgggtgagggattggcttgagttgccatatgtatcgccctacgccgatacgtctgggcttcacccggcgtcaccggaagcagagaagaggttgattggtgttttacatgaggttttatccttgtctgtagagcggaggatggctgtaccaattatagggaagttctgtgatgagtttaggctgtcaaatgcgtttgctaatgcgttcacgagacatccggggatattctatgtgtcgttgaagggtgggatcaagacggcggtgttgagggaagcatatgatgagaatggcgagcttgttgataaggatccaatgattgagctgaaggagaggtttgtggcaatcatggatgaggggcatagagagtatttggaggagttgaggaagaagagggaagagttggagaaacagagactgcaggaggcttataggggtgccaaagttggcacaggtattgaggatgagatggaggaggaaggcactgatgagtcagatgaagatgatgattcagaagaaggagaggccctgtgagttgtgcatatgatttctgttgcgcttctatggttagtatgacctggggagcagtggccaaggtaaattgatgattcattcaattcttagtttgatcaactttctgcaaataaataagatgactggttgatgtccaacaactctgtttctgaaattatgctgaaatgtaggttttatgatgttgtggccgttgatactgttttatggcaagattgcctttattcatttatgacttaactcattttcttttcgattaattctttaaatgatggctttgtttttgtcagttgactcgatctggggttggaaatggaatcgcagcatttgttttggaacctctaaacagtctgtcaagacttgaggatattctttgtaagcatatcactcaaaacctttcctttcattgaactatctaaacatgtttgcatcatgtcatgctttagacaggtgaaccaaatatttgtttgtgctatctgattctcatgaggacactgaacaactaacagtgcagaatatttgtttacaatgacctataaaaatttgctacatttctctgtaggtgattactagatatgcaaaccatatccagctgtgtttttttgaacaaataaaatcattatatgtgtttttgttgccatagcagatattgctggttaaccaaatgttgagactttgacagaatggacctctttttcaagatagggacttcattaaccataattacatgcaagaacttttcaggaaagttcaaccattgctgatattggcgcacacaaacagcaccagtatgtgcaactgacatgaaaataaactgcaatctgataagtgataatgaacagtctctacaagtaacaaacaaaaaaactggagttataatatctgttcttgtaatattttatcctagaagagcctatcccaaccacagttttatcttcccaagtcccaactcacaacatgtttttgagcatggaagtggaacacttcttggccaacaagttattcatcacaaagcatgtctttatccttttcaaagggagacatccatgttttgcagaaaatttactagaggaaacccatccaaagagcacaaactgtgccttttccagcaggatcagtgagatttgagaatgatctgttgctgacacttagtataatatgataaacattagggacaattttgtttttagccctatttcgatatacaattgtgattttgcccctactttttagggttttcgtttttacccttgtttttctgaaatgaaacaggcgtttacccctagttctcatggaagttagtggagctgtaattgttgtagtaaggaaattgaaaataaaataaataatgattttgcaaattgaagatttacctttgtacccctggccgtctcgctggcccgagcagtacccaaaaccctatcactaatccccacccccggtggcggcggtgtcccggccaggagcagccagccacgggcaggaggccacggtggggctgctggccccgtcggcggtgtctgggctgggagcaggcggtggcgcacaggaagccattgtggcgagcgggaggccacggcggcgtggcagggagcaggaggccagcagctgcacgcaggggctgtggcacgcgggaagcaggcaagcaagcatatttgtatcagctgctcatag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0293200, RefSeq:Os01g0293200