Os01g0296700

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Revision as of 04:36, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0296700| Description = Glycoside hydrolase, family 3, N-terminal domain containing protein| Version = NM_001049341.1 GI:115436095 GeneID:432...")
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Gene Name

Os01g0296700

Description

Glycoside hydrolase, family 3, N-terminal domain containing protein

Version

NM_001049341.1 GI:115436095 GeneID:4326722

Length

1905 bp

Definition

Oryza sativa Japonica Group Os01g0296700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:10920314..10922218

Sequence Coding Region

10920314..10921253,10921329..10921957

Expression

GEO Profiles:Os01g0296700

Genome Context

<gbrowseImage1> name=NC_008394:10920314..10922218 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:10920314..10922218 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atcaacggcgtcccggcctgcgccgacgcgcgcctcctcacggagaccgtccgccgcgactggcagctccacggctacatcgtctccgactgcgactccgtccgcgtcatggtcagggacgccaagtggctcggctacaccggcgtcgaggccaccgccgccgccatgaaggccggcctggacctcgactgcggcatgttctgggagggcgtccacgacttcttcaccacctacggcgtcgacgccgtccggcaggggaagctcaaggagtccgccgtggacaacgcgctgaccaacctctacctcacactcatgaggctcggcttcttcgacggcatcccggagctcgagtccctcggcgccgccgacgtctgcaccgaggagcacaaggagctcgccgccgacgccgccaggcaggggatggtgctcctcaagaacgacgccgcgctgctcccgttgtcgccggagaaggtcaattcggtggcactgttcgggcagctgcaacacatcaatgccaccgacgtcatgcttggagactacagaggtaagccttgcagggtggtgacgccgtacgacggcgtacggaaggtggtcagctcgacgtcggtgcacgcatgcgacaagggatcgtgcgacacggcggccgcggcggcgaagacggtggacgcgaccatcgtcgtcgccggcctgaacatgagcgtggagagggagagcaacgacagggaagacctcctcctgccgtggagccaggccagctggatcaacgccgtcgccgaggcctcgccgtcgccgatcgtcctggtgatcatgtccgccggcggcgtcgacgtctccttcgcccaggacaaccccaagatcggcgccgtcgtctgggccggctaccccggcgaggaaggcggcacggccatcgccgacgtgctcttcggaaaatacaatccaggaggaagattgccgctgacgtggtacaagaacgagtacgtgagcaagatcccgatgacgtccatggcgctgcggccggacgccgagcacggctaccccggccggacctacaagttctacggcggcgccgacgtgctctacccgttcggccacggcctcagctacaccaacttcacctacgcgtcggccaccgccgccgccccggtcacggtcaaggtcggcgcgtgggagtactgcaagcagctcacctacaaggccggggtgtcctcgccgccggcgtgcccggccgtgaacgtggccagccacgcgtgccaggaggaggtcagcttcgccgtcacggtggccaacacgggcggcagggacggcacccacgtcgtgccgatgtacacggcgccgccggcggaggtggacggcgcgccgcggaagcagctggtggcgttccggcgggtgcgggtggccgcgggcgccgccgtcgaggtggccttcgcgctcaacgtgtgcaaggcgttcgcgatcgtcgaggagacggcgtacaccgtcgtgccgtcgggagtcagcagggtcctcgtcggagacgacgcgctgtcgctgtccttccctgttcagatcgacctgcaggcggcagcatag</cdnaseq>

Protein Sequence

<aaseq>INGVPACADARLLTETVRRDWQLHGYIVSDCDSVRVMVRDAKWL GYTGVEATAAAMKAGLDLDCGMFWEGVHDFFTTYGVDAVRQGKLKESAVDNALTNLYL TLMRLGFFDGIPELESLGAADVCTEEHKELAADAARQGMVLLKNDAALLPLSPEKVNS VALFGQLQHINATDVMLGDYRGKPCRVVTPYDGVRKVVSSTSVHACDKGSCDTAAAAA KTVDATIVVAGLNMSVERESNDREDLLLPWSQASWINAVAEASPSPIVLVIMSAGGVD VSFAQDNPKIGAVVWAGYPGEEGGTAIADVLFGKYNPGGRLPLTWYKNEYVSKIPMTS MALRPDAEHGYPGRTYKFYGGADVLYPFGHGLSYTNFTYASATAAAPVTVKVGAWEYC KQLTYKAGVSSPPACPAVNVASHACQEEVSFAVTVANTGGRDGTHVVPMYTAPPAEVD GAPRKQLVAFRRVRVAAGAAVEVAFALNVCKAFAIVEETAYTVVPSGVSRVLVGDDAL SLSFPVQIDLQAAA</aaseq>

Gene Sequence

<dnaseqindica>1..940#1016..1644#atcaacggcgtcccggcctgcgccgacgcgcgcctcctcacggagaccgtccgccgcgactggcagctccacggctacatcgtctccgactgcgactccgtccgcgtcatggtcagggacgccaagtggctcggctacaccggcgtcgaggccaccgccgccgccatgaaggccggcctggacctcgactgcggcatgttctgggagggcgtccacgacttcttcaccacctacggcgtcgacgccgtccggcaggggaagctcaaggagtccgccgtggacaacgcgctgaccaacctctacctcacactcatgaggctcggcttcttcgacggcatcccggagctcgagtccctcggcgccgccgacgtctgcaccgaggagcacaaggagctcgccgccgacgccgccaggcaggggatggtgctcctcaagaacgacgccgcgctgctcccgttgtcgccggagaaggtcaattcggtggcactgttcgggcagctgcaacacatcaatgccaccgacgtcatgcttggagactacagaggtaagccttgcagggtggtgacgccgtacgacggcgtacggaaggtggtcagctcgacgtcggtgcacgcatgcgacaagggatcgtgcgacacggcggccgcggcggcgaagacggtggacgcgaccatcgtcgtcgccggcctgaacatgagcgtggagagggagagcaacgacagggaagacctcctcctgccgtggagccaggccagctggatcaacgccgtcgccgaggcctcgccgtcgccgatcgtcctggtgatcatgtccgccggcggcgtcgacgtctccttcgcccaggacaaccccaagatcggcgccgtcgtctgggccggctaccccggcgaggaaggcggcacggccatcgccgacgtgctcttcggaaaatacaatccaggtacagaatcgagtgtacatgtagattaattctctgttcttcaatgcatttttctgaaacatttttgttttgtaggaggaagattgccgctgacgtggtacaagaacgagtacgtgagcaagatcccgatgacgtccatggcgctgcggccggacgccgagcacggctaccccggccggacctacaagttctacggcggcgccgacgtgctctacccgttcggccacggcctcagctacaccaacttcacctacgcgtcggccaccgccgccgccccggtcacggtcaaggtcggcgcgtgggagtactgcaagcagctcacctacaaggccggggtgtcctcgccgccggcgtgcccggccgtgaacgtggccagccacgcgtgccaggaggaggtcagcttcgccgtcacggtggccaacacgggcggcagggacggcacccacgtcgtgccgatgtacacggcgccgccggcggaggtggacggcgcgccgcggaagcagctggtggcgttccggcgggtgcgggtggccgcgggcgccgccgtcgaggtggccttcgcgctcaacgtgtgcaaggcgttcgcgatcgtcgaggagacggcgtacaccgtcgtgccgtcgggagtcagcagggtcctcgtcggagacgacgcgctgtcgctgtccttccctgttcagatcgacctgcaggcggcagcatagcagcataggttctctgcaattcttggagttcgttggattcttttgctggggtggtaaaaggtaaaaaaaaaatcgaagcaagtgtaattagtttacaccacgctatagatgaaacttttacaaagcacattgcatcattgggaattaattggaacaggaattttcatttttagttttgctcaatgtattactgtgatggcatgttattcagcaatgttacactttttttttcaataatggaaatcaatcattagcagtgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0296700, RefSeq:Os01g0296700