Os01g0297700

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Revision as of 04:36, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0297700| Description = Protein of unknown function DUF6, transmembrane domain containing protein| Version = NM_001049344.1 GI:115436101 Gene...")
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Gene Name

Os01g0297700

Description

Protein of unknown function DUF6, transmembrane domain containing protein

Version

NM_001049344.1 GI:115436101 GeneID:4326725

Length

3342 bp

Definition

Oryza sativa Japonica Group Os01g0297700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:10959253..10962594

Sequence Coding Region

10959450..10959625,10960550..10960612,10961369..10961900,10961992..10962357

Expression

GEO Profiles:Os01g0297700

Genome Context

<gbrowseImage1> name=NC_008394:10959253..10962594 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:10959253..10962594 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggagggagagcttgccgacgctggccatggtgatggtgcagctgggcttcgccggcatgaatgtggtgtccaagctggcgctggacaccggcatgagcccctacgtcctcatcgcctaccgcaacatcatcgccgccgtcttcctcgcccccttcgcctactacttcgagaggaagagtggcatggtgatcaccaagaaagtacttgtccagatattcttctcctccatttttggcgcgacgctgaaccaggtgctctacttcgtggggctcaagtccacgacgccgacggtggcgtgcgcgctcagcaacacgctcccggcgctgacgttcgccatggcggcggcgttccggatggagtcggtgcggctgagcgcggccgccgggcaggccaaggtgttcggcacggtggtctgcgtcggcggctccatgatcatgccgttctacaagggcccgctcctcaggctctgggcgtcgcccatccactggcggttcgcggagagcgccgcgtcgggcgcggcggcgccagccgcgggcggcgccgccgtcctcggcgacgtcctcatcatcctcagctgcgccgcgtgggccgtgtggttcatcatacagaccaagatgtcggagcggttctcggcgccgtacacgagcacgaccatcatgtgcttgatggccggtgtgcagtgcgccggcgtcagcgccgccatggacaggagcgtcgccgtgtggaagctcggcttcgacatccgcctctactccgtgctctacatcggcgtggtcgggtcggggatcgcgttcgcgctcatgtcgtggtgcatccaggtgcgcggcccgctgttcgtgtccatgttcagcccgctgatgctggtggtcgtggccattgtcggctgggcgatcctcgacgagaagatacacgtcggcagcgcgatcgggtccgtgctgatcgtcgccgggctgtacatggtgctgtgggggaaggcgagggagatgggctcgccatcggacctcgacggcggcggcggcggcggcggcgtggtggagctgaacggcaagggcgccgacgccgcgacgaccttgccggtgttctgcaccaccaccaacaagcacgagacgacccggaacggctgcagcaactga</cdnaseq>

Protein Sequence

<aaseq>MGRESLPTLAMVMVQLGFAGMNVVSKLALDTGMSPYVLIAYRNI IAAVFLAPFAYYFERKSGMVITKKVLVQIFFSSIFGATLNQVLYFVGLKSTTPTVACA LSNTLPALTFAMAAAFRMESVRLSAAAGQAKVFGTVVCVGGSMIMPFYKGPLLRLWAS PIHWRFAESAASGAAAPAAGGAAVLGDVLIILSCAAWAVWFIIQTKMSERFSAPYTST TIMCLMAGVQCAGVSAAMDRSVAVWKLGFDIRLYSVLYIGVVGSGIAFALMSWCIQVR GPLFVSMFSPLMLVVVAIVGWAILDEKIHVGSAIGSVLIVAGLYMVLWGKAREMGSPS DLDGGGGGGGVVELNGKGADAATTLPVFCTTTNKHETTRNGCSN</aaseq>

Gene Sequence

<dnaseqindica>198..373#1298..1360#2117..2648#2740..3105#gctgcaacctatagctagagagctactgcggcactagtcactctctctctctctctctatagctttgcttgatcatatcaataccaccgccctacaaatctctctctctctctctctcaagaggaattgaactgaagttcttgcagcacggtcgagaagtaagggagttgagagttgagagagtagagaagagggagatggggagggagagcttgccgacgctggccatggtgatggtgcagctgggcttcgccggcatgaatgtggtgtccaagctggcgctggacaccggcatgagcccctacgtcctcatcgcctaccgcaacatcatcgccgccgtcttcctcgcccccttcgcctactacttcgagaggtacacgtacgtacgtatgtctatatcgttacgcatcgtgctgcgctctagctagctacttcctttcgttccctcgacgatcgattccttccttgtgtttcttgttctgattagtgaatattatattcattctttcatggtctttttcttttccctttgaattcattcattcctgcatgtgtggggagtagattcaaagaaatgtttgtttttttttcagatggcaaaataaatgattcttttagtgtcactggcatgttttgactcttgatttgttataccttcatcagaagaaagaaaggaacggactttaattcagtacatctctgagatgtctttttctccttatatcagaaacagggcatgcactcctactgtatttaatgaaaatgacatagtctcatgctgatttcccttcaaaaaaaaaacaggggcaaaaattaatcaatacagggtgttctcaatattcatgtaacaatgctaccagtagtttcctcttgtagaggatgctcttcctgacttcttgtcctgtcgagtttgttttgctctgcgtgattacgaaagcaagtcaaatttttgtttttttgcggctaaccattcaattggcatacttatggcttcgctgtaatttctaaatatatattctccatgtgaatgtactacacctggtgccaactgggattacaacccccaaggagagcttcattaactggacttactaacctcattgaatgtcttaaatgttcatgcactaagcaacatatgaggctgatctcacataaccagctgtatctagctcttgcgtggaatcaatcaatcaatttaataaccaagattttgtttgttggaaatgaattaaccgttttgaatcaagtttgatattagtggttttaatcagtactcaacctacatggatgcatgcaggaagagtggcatggtgatcaccaagaaagtacttgtccagatattcttctcctccatttttgggtaagtactctctccattaaccagttaaacatgtcactgaattaatcgaacttgcagcaatgatctcctgaattaaaggaaaaaaagaagaaaaatgaatcgctagctaggcttgcccatcaaaggagccgatttcttgcaaaactgtctcttttcccctgaagttgagatggccatgtttgtgcactccacatgtgttccttattcttccagggatagggaacatgcttattctgtgtcatgccgttgcctctctaaaaagaacgctaccaatggcgaactgacaaactgaataaactgtactctagttgatcaccacaacccaaccaggccacttaaaaggttgcagccaatgcaaaactgattaattaattagcagtttaactaattgctttttggatgaaaccttcatttgtcccggaattttatttcaatccaacaagttataatctgaatttgcagtttggaaagtgaatacaacttacagtagcaggggtgtgaccctgttctgttctgcctcacctgttctgacactttgccgcgttcaatcttagatcgactagcaaattcaactatatgttgtgatcatgttactagattttacccattttttactatccagtcaaataacggccaaacatatgttgacaagatcaaaacttagcaccaacgcgcacacatttcgaaatgtttatttagaaactaatgtgatttaaataaccgcaacagttaataatttggcatgtacgtgtgcagcgcgacgctgaaccaggtgctctacttcgtggggctcaagtccacgacgccgacggtggcgtgcgcgctcagcaacacgctcccggcgctgacgttcgccatggcggcggcgttccggatggagtcggtgcggctgagcgcggccgccgggcaggccaaggtgttcggcacggtggtctgcgtcggcggctccatgatcatgccgttctacaagggcccgctcctcaggctctgggcgtcgcccatccactggcggttcgcggagagcgccgcgtcgggcgcggcggcgccagccgcgggcggcgccgccgtcctcggcgacgtcctcatcatcctcagctgcgccgcgtgggccgtgtggttcatcatacagaccaagatgtcggagcggttctcggcgccgtacacgagcacgaccatcatgtgcttgatggccggtgtgcagtgcgccggcgtcagcgccgccatggacaggagcgtcgccgtgtggaagctcggcttcgacatccgcctctactccgtgctctacatcgtaagttgcgccgacacgaaaccgatcgatcgaaccgattttcgtttttcttttctgacgcgagagctgttgatgatgatgatggtttcagggcgtggtcgggtcggggatcgcgttcgcgctcatgtcgtggtgcatccaggtgcgcggcccgctgttcgtgtccatgttcagcccgctgatgctggtggtcgtggccattgtcggctgggcgatcctcgacgagaagatacacgtcggcagcgcgatcgggtccgtgctgatcgtcgccgggctgtacatggtgctgtgggggaaggcgagggagatgggctcgccatcggacctcgacggcggcggcggcggcggcggcgtggtggagctgaacggcaagggcgccgacgccgcgacgaccttgccggtgttctgcaccaccaccaacaagcacgagacgacccggaacggctgcagcaactgaagctgatggcgcaccggggcatatggatggcggatcacctgattatatatgcgctagctgcacatttcacaggctgttgcatgtgtgacaactacatcttgctggggatatcaattggtgcggtagtatatagatgtgggagtttgctagtagtagctaggtaaaagttgggggaggtgtgtgagactgtacctgtgccttggttcttgacattaaaaatggattgtgcacttgtgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0297700, RefSeq:Os01g0297700