Os01g0301500

From RiceWiki
Revision as of 04:36, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0301500| Description = Protein prenyltransferase domain containing protein| Version = NM_001049358.1 GI:115436129 GeneID:4325784| Length = ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0301500

Description

Protein prenyltransferase domain containing protein

Version

NM_001049358.1 GI:115436129 GeneID:4325784

Length

5277 bp

Definition

Oryza sativa Japonica Group Os01g0301500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:11126162..11131438

Sequence Coding Region

11126373..11127524,11131115..11131417

Expression

GEO Profiles:Os01g0301500

Genome Context

<gbrowseImage1> name=NC_008394:11126162..11131438 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:11126162..11131438 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaccgcccacgcccggcctctcggccgccgctcgcctcgtcatccgccgcttcctcaccaccggcgcggaggccgcggaggcggtggctccccacgccgcgagggcgaaggggaagaaggacaagcggccgctgggtcggcggctgctggagctcggggacgcggcgggggaagggagcgtgtcgcgggtgctggacgagtgggtgcgcgaagggcgggaggaggcgatcgccgcggcggatctcgccaagtgcgccagggatctccacaaggtcaagcgcgacgcccacgccctcgagttgatggattggatggttaatacaaagggtatgagcatgacatatgctcgatatgcattgcatttggaactcctttacagtgtgtatggcattgaggctgcagaggaatacttttctggcatcccttcttttactcgagaccagaaccatcgaacttatggtgcacttttgaactgttattgctctgctaaaatggaagagaaagctacaaatatctatcgcaggatggacgaacttggcatcccatccagtactaagctcatgaataacctgatgggcctttacctggagctaggccaacatagcaaggtggctaacctgtttgatgagatgaaagagaggaatgttcaaccggatgagctcacatgctgcattctgatgcgtagtcatgcagcacacaacaagatagatactgtcaaagagactttttacaacatgtcactattagatgtgcctaaacaatggtctatatttagaacactcggttccatctatatgaatgctggtatggttgaagaggcagaattggcttttatgagagctcaggaatttctcggttttgatcatggcaggcaccctttttatttccttatgaggcaatttgcatcaataggcaatttgagaggggtcaacagagtgtggaaagacataaaaatgactttttcttataacaggactaacttcagctacctcctcatgcttcaatgtctctataaactcggtgacaccgatcggatgaaggagatttataaggagtgggaatatcgttatgaaaactatgacccgaggctgacaaatatgttgacccgagctcatctaaggaatggcatgaccaatgaagctgaattgttgtgggagaaggtcaaggaaagaggtggtgatttcgatttcgaaacatgtgagctgtttcgggagcattacttggggaaaggggacacgacctccgctttgaaatgggctgaaaagatgaccaaacttcccaagaaacaagggaagcaagatcaggagacctgcaagttcttgaagtggttcgaagaagacaaggttgtggaaggtgccaaaagtacctgcaactgcagcaactgcttgaggaatgcggacagcaagacatgtgaacccctcctggctcctgcagacctactccccgactga</cdnaseq>

Protein Sequence

<aaseq>MAPPTPGLSAAARLVIRRFLTTGAEAAEAVAPHAARAKGKKDKR PLGRRLLELGDAAGEGSVSRVLDEWVREGREEAIAAADLAKCARDLHKVKRDAHALEL MDWMVNTKGMSMTYARYALHLELLYSVYGIEAAEEYFSGIPSFTRDQNHRTYGALLNC YCSAKMEEKATNIYRRMDELGIPSSTKLMNNLMGLYLELGQHSKVANLFDEMKERNVQ PDELTCCILMRSHAAHNKIDTVKETFYNMSLLDVPKQWSIFRTLGSIYMNAGMVEEAE LAFMRAQEFLGFDHGRHPFYFLMRQFASIGNLRGVNRVWKDIKMTFSYNRTNFSYLLM LQCLYKLGDTDRMKEIYKEWEYRYENYDPRLTNMLTRAHLRNGMTNEAELLWEKVKER GGDFDFETCELFREHYLGKGDTTSALKWAEKMTKLPKKQGKQDQETCKFLKWFEEDKV VEGAKSTCNCSNCLRNADSKTCEPLLAPADLLPD</aaseq>

Gene Sequence

<dnaseqindica>3915..5066#22..324#aaacagaaaccctctaaacccatggcaccgcccacgcccggcctctcggccgccgctcgcctcgtcatccgccgcttcctcaccaccggcgcggaggccgcggaggcggtggctccccacgccgcgagggcgaaggggaagaaggacaagcggccgctgggtcggcggctgctggagctcggggacgcggcgggggaagggagcgtgtcgcgggtgctggacgagtgggtgcgcgaagggcgggaggaggcgatcgccgcggcggatctcgccaagtgcgccagggatctccacaaggtcaagcgcgacgcccacgccctcgaggtatgaacggaatacgcgtgcatcgcctcctttgccatcgaaacacgtacgtacggctttggctcaggctggctgtgtgcgccttctgcttttgcttggcttactgttgttgtttgcgcctctatctgcacagggaattattagtgcaaatcaaatcgaatcgaatcgatcaacagaaaattgacctgaacccttcaaatgtttagggcccctttgaatcgtaggaatgaaaaaacagaggaataggaaaaacacaggattctgacaggaatacaattgtaaaacagaggattgcaaaacacaggaaaaacacaggaatggccgtttgattggaccacaggaaaaacgcaggaatcagatgagagagatagactcagaggaaatgttccaagaggttagacctcttgctaactttcctccaaaatgtgcataggattacccattccataggaattttaaatgattgaataggattcaatcctttgtctcaaaggccttcataggatttttttccataggattgaaatcctccaaaattcctacatttttcctacaaatcaaaggggcccttaggatttgtccgcgtattcgctgagtattgtatttgcccatgttttcatgaaaatagtcaaaatgtgtccctaacaatgtatttcgctacttctttttactccctccgtcccaaatttttcgagaatacgctagaagcgtatttttacattaagaggagtaaaaaagttatttacaaccaaaggcaaaagcagtaggggacaggggaaccggacaagagaaaataaaccccgccacgtgcctacacaccaccacaccgagaggaatacacggccacctccaaaatgatgccttcaagaaggtcacgatattcaaaacgccgccttcaagaaggtcacgatattcaaaacgccgccatcgcccattccgaaaggatgaggttttcacctcgaggatccttgaagagggggagggaggcatctcaacaactccctcaagagggttgcaacgtccaaagacgtcgccgttgccgcccaagaattgggccggctttcgtctagcacctgccaatacccctcttgccgctacctcaccgactcccaggcaatgtcaacacgtggcctctacagcaatgacgcccctccgtcggctggactccaagcgacctgacctactgccagcgcgacccccacagctacacgttggaacgagcacgaccaaaccaccgctgcacttcggcgaccagctagccttcctcccatgccgtcacctccaaagagagtgcccgccaccacccatcactatcgataacaacctggggcaaccttgccactgccttcatcgtctcgcaaaggagctccccacaaccaagcggtcaagaaggggaggagctccaaggagatgagaaggcacccacatggcgtcccctcgtcatcgccggtcgtgatggcagtgctgtgcggctgaatccgagctcgaccccagatccggcggcaactccaccggccaacacctgcagcatcgccacacgggcgacgcgcaacgaccccgccgccgccatgcaagccggcgtcccagtcgggtcccccacaacgtagccatccttctggcagcagcccccaccggcggtcatccacgaggcggcagcaagcatcaccggcgccagccattgccgcgtcggcccgctacacggcgccgcacgcatcgacctcgacgtcggcgtcgtcccgtcgtgcaggcgccgtcctcccgtcgccggcgacgccggccataaagaccttggccatccgggagagtcggatccggccacggggacgccggatccgggcggggcgccgccggagccgccgccgccttgctaggtgccgctcccagctgccgggccgtacccaggcagccgagccgtaacgggcctgccgcgccgccggctactcccagccggcaaagccacgccgccgccgctgcccccagccgcgcaccaccgccgggccgccgcgccagatccggccatgggggtgccggatccgccgccaccccacaccgccccgccgcctccacttctcccagcggtggggtacctcattggcgtcgccccgtccacgtcgcgccgggattgagccgccaagaggaagaaggacctcgccgccgccttccctgctcgctgccagctttgccgccggcgagctccggcggtggcgaggcgggggagagggggagtaggcacaggcggctagggttttcgccctccgagccgcccgcgcgagagcgacgcggggtctattccaagccacaaagctcccctccgtcctaaattatagggcgtcatttttttaaagaaaaatcaaacttgatagcttttgactaataatcatactaaccatatagtagtatatgttaagtattatgcatgttatatcactatatttctttcatgtgatgctaatttattatctgttggaaacataacatgtgataaattaatggtcaaagtatgtcattggtgaccgtgtaaaaaaaatatagtccttataatttgggacggaggaagtattaccgaaatgctgaatttgaaatggccaaaacacattacctcttcctcactcacttctcctgctacatgtccttgcaacctttccatgcccgccgctgtacggcaggaacatatgcgcttgatcactccaaacagttagcgcaaacgacaagaagtaaaatgcaccttgagacagcagagataatattaatacagcatgtttcttccggaatgatatgtaccaaaagttagttggttgacgagaatgcatccatgaatcaaccacgcaacgtaattcaatccatgagtgtgtattgcaaattggatgattagattgaaataaaacacctgtcccaagcctaatgctcaagccagatgggcggtaggtcagcaaaggagaccactttcctgacctactgccagcaagtgaggcagagcagggagaggaaaatgtggtcagagagctcggggatgaaggcattggccggcgaacttggggatgagggtgaattaggtgcacgacgggccaggagaggagagggtgtggccgatgagcgaggcaagcaacatgccaggaggggatagcttgttaggacgagtgtggcaaccggtgaggcatacgatggccagttcgtgaagacagaggttaacttgtgaagcccaccaaaataattcgctaactagactaccacgcaagctaaaaaccttcatggattagattgaggggtgtaaagcaaacgacttggaaagttgagggatgaataatctccggtttagaagttcagaggcgatttagacttctgtggaagttcaggtgcgtaaaatggaatttttcccatatggaagttcaggtgcgtaaaatggaaattttccaatataatagcatgttgttgcaactatatgctcagttatcctcaagatcacaaaagattagtactagtactgaacttctcaacatatcttgtttcagagcaatccgtatgtactgcaattggggtttagattatgattattgtgcttatgtaatattttttcttggtttctttggcagttgatggattggatggttaatacaaagggtatgagcatgacatatgctcgatatgcattgcatttggaactcctttacagtgtgtatggcattgaggctgcagaggaatacttttctggcatcccttcttttactcgagaccagaaccatcgaacttatggtgcacttttgaactgttattgctctgctaaaatggaagagaaagctacaaatatctatcgcaggatggacgaacttggcatcccatccagtactaagctcatgaataacctgatgggcctttacctggagctaggccaacatagcaaggtggctaacctgtttgatgagatgaaagagaggaatgttcaaccggatgagctcacatgctgcattctgatgcgtagtcatgcagcacacaacaagatagatactgtcaaagagactttttacaacatgtcactattagatgtgcctaaacaatggtctatatttagaacactcggttccatctatatgaatgctggtatggttgaagaggcagaattggcttttatgagagctcaggaatttctcggttttgatcatggcaggcaccctttttatttccttatgaggcaatttgcatcaataggcaatttgagaggggtcaacagagtgtggaaagacataaaaatgactttttcttataacaggactaacttcagctacctcctcatgcttcaatgtctctataaactcggtgacaccgatcggatgaaggagatttataaggagtgggaatatcgttatgaaaactatgacccgaggctgacaaatatgttgacccgagctcatctaaggaatggcatgaccaatgaagctgaattgttgtgggagaaggtcaaggaaagaggtggtgatttcgatttcgaaacatgtgagctgtttcgggagcattacttggggaaaggggacacgacctccgctttgaaatgggctgaaaagatgaccaaacttcccaagaaacaagggaagcaagatcaggagacctgcaagttcttgaagtggttcgaagaagacaaggttgtggaaggtgccaaaagtacctgcaactgcagcaactgcttgaggaatgcggacagcaagacatgtgaacccctcctggctcctgcagacctactccccgactgacaagacaagccgttcgctgcttcaacggatcaaagaagattcaattgaagtgtttggtagtccatagaagtttttttttcacatatctgaaaattgcaaaattaaccgatccacgcatctgataacgatactttgttttggaaagtacccaaataatgtaacttacttcctccgttttataatgtaagtcattttagcattgcccacattc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0301500, RefSeq:Os01g0301500