Os01g0301900

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Revision as of 04:36, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0301900| Description = Protein of unknown function DUF247, plant family protein| Version = NM_001049360.2 GI:297596609 GeneID:4325786| Leng...")
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Gene Name

Os01g0301900

Description

Protein of unknown function DUF247, plant family protein

Version

NM_001049360.2 GI:297596609 GeneID:4325786

Length

3345 bp

Definition

Oryza sativa Japonica Group Os01g0301900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:11158155..11161499

Sequence Coding Region

11158155..11158415,11160213..11161499

Expression

GEO Profiles:Os01g0301900

Genome Context

<gbrowseImage1> name=NC_008394:11158155..11161499 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:11158155..11161499 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcataccaacctgccgagccatggcgcccaagccgccgaagcagaagcactcgccgccgccgccgacctcgagcaaggcctcacccgccacctcatggaataccaccagagcgaggcgtcgtcggacgagagcgccaggcagcggccccgcgtcggccgcgtcccgccgcacgtccgcaacctggacggcggcgccgaggcgtacaccccaaagttcgtctccatcggccccatccaccacgccgacgccacgctccgccgccacagccacgacctcaaggtggcgtacctccacgccctcatcgcgcgccgcaccccggaccccatcgacgaggtcgccgtcctcgccgcgctgatcggctacaaggccggcgtggcggcggtggaggaccgggcgcgcaggttctacaaggagcccgtggacgaacacctcaccgccgaggcgttcgtcgacctgctggtgctcgacgccgccttcctcctcgagcacatgctcaacctcgccacggggtacgaggacccgctgctccaccgcacccactgggcgccgtcgcagctgcactccgacctcatccgcttcgagaaccaggtcccgttcttcgtcgtcgccgagctgctcgcgctctcgccgctgcaccgcgacccggagctggaggcgtgccgctccggccgccgcgacttcctccgcagcatcggcgtgcactgcctcctccgcaaggacgacgaggagctcaagacgctgccgccgagcgacgacatccaccacctgctccacctctacagcctgtcgctgacggaggcgcggctgcggcggccgcacgcgcacgccgggctgggcgccacggcgtggcgcgcgctctggaagctccccatcgtgacgctcatgccgttcgcctacctgctgtgctccggtggcgccgacgacggcaagggggaggaggaggacgaggcggcggcggtgaagctgccgaacatcccgagcgcgacggacctgcagagggtggggatcaagttcaagcgggcgccgaggaagcccgacggcgggttcctggacgtgcggctggaggacggcgacacgctggtgatccccatggtgaacatcgagcagttcacggcgccgcagctgcagaacctcatcgcgctggagcaggccacgccggagctccccgacgactgctcctgctacgccttcttcatggacaacctcgtcgccaacccggccgacgtcgcgctgctcgagtccgagggcatcctcaagagcaacctcggcagccacaaggcggtggtgacctacttcaacaagctgtgcaaggggaacaagctggaggtggaaggcaactacctgcggtccgtgttcgaggcgctgatggagcgcaacaggaaccccatgtacgcctggatccgcaccctgaggaagaagtacttcagctcgccgtgggggatcatcgccatggtcgtcaccctctttgtcttcgcctccaccgtcctgcagacctacatctccatcgtccagtactacttcgccaacaatggcgattactag</cdnaseq>

Protein Sequence

<aaseq>MEHTNLPSHGAQAAEAEALAAAADLEQGLTRHLMEYHQSEASSD ESARQRPRVGRVPPHVRNLDGGAEAYTPKFVSIGPIHHADATLRRHSHDLKVAYLHAL IARRTPDPIDEVAVLAALIGYKAGVAAVEDRARRFYKEPVDEHLTAEAFVDLLVLDAA FLLEHMLNLATGYEDPLLHRTHWAPSQLHSDLIRFENQVPFFVVAELLALSPLHRDPE LEACRSGRRDFLRSIGVHCLLRKDDEELKTLPPSDDIHHLLHLYSLSLTEARLRRPHA HAGLGATAWRALWKLPIVTLMPFAYLLCSGGADDGKGEEEDEAAAVKLPNIPSATDLQ RVGIKFKRAPRKPDGGFLDVRLEDGDTLVIPMVNIEQFTAPQLQNLIALEQATPELPD DCSCYAFFMDNLVANPADVALLESEGILKSNLGSHKAVVTYFNKLCKGNKLEVEGNYL RSVFEALMERNRNPMYAWIRTLRKKYFSSPWGIIAMVVTLFVFASTVLQTYISIVQYY FANNGDY</aaseq>

Gene Sequence

<dnaseqindica>3085..3345#1..1287#atggagcataccaacctgccgagccatggcgcccaagccgccgaagcagaagcactcgccgccgccgccgacctcgagcaaggcctcacccgccacctcatggaataccaccagagcgaggcgtcgtcggacgagagcgccaggcagcggccccgcgtcggccgcgtcccgccgcacgtccgcaacctggacggcggcgccgaggcgtacaccccaaagttcgtctccatcggccccatccaccacgccgacgccacgctccgccgccacagccacgacctcaaggtggcgtacctccacgccctcatcgcgcgccgcaccccggaccccatcgacgaggtcgccgtcctcgccgcgctgatcggctacaaggccggcgtggcggcggtggaggaccgggcgcgcaggttctacaaggagcccgtggacgaacacctcaccgccgaggcgttcgtcgacctgctggtgctcgacgccgccttcctcctcgagcacatgctcaacctcgccacggggtacgaggacccgctgctccaccgcacccactgggcgccgtcgcagctgcactccgacctcatccgcttcgagaaccaggtcccgttcttcgtcgtcgccgagctgctcgcgctctcgccgctgcaccgcgacccggagctggaggcgtgccgctccggccgccgcgacttcctccgcagcatcggcgtgcactgcctcctccgcaaggacgacgaggagctcaagacgctgccgccgagcgacgacatccaccacctgctccacctctacagcctgtcgctgacggaggcgcggctgcggcggccgcacgcgcacgccgggctgggcgccacggcgtggcgcgcgctctggaagctccccatcgtgacgctcatgccgttcgcctacctgctgtgctccggtggcgccgacgacggcaagggggaggaggaggacgaggcggcggcggtgaagctgccgaacatcccgagcgcgacggacctgcagagggtggggatcaagttcaagcgggcgccgaggaagcccgacggcgggttcctggacgtgcggctggaggacggcgacacgctggtgatccccatggtgaacatcgagcagttcacggcgccgcagctgcagaacctcatcgcgctggagcaggccacgccggagctccccgacgactgctcctgctacgccttcttcatggacaacctcgtcgccaacccggccgacgtcgcgctgctcgagtccgagggcatcctcaagagcaacctcggcagccacaaggcggtacgtacgtacacaaattattaagagctagcccagggttcttcacgaacttggaaagaaaaaaaaattaaacgaaaaaaatttgaaatttcaacaggaatttgaactttttttgtaaagaaaacaaattcaagctttctctttcttccaaaaggcacatcctaggatttaagttgaaaagggaggatatgttgccatagtttggtagtaagcccggtaaccatagtaaaccgtgtggttgccacggtgaatagtgagataaatagatatgatttatcaaaaattcaaacttttacttaattgtttttaaaactttaaaacaataggtccagttgatggtaagaaaaacactgatcctaataagatccacaagtaaacacaaaattttggaaatttaagaaccaaattaaccctaaaaattctcaattcttatagaagttttcaaaaactatttaggccatatgtttcatattttaaaatgttttaagtttatcctaagtcaaaattctttaggtttgatcagttttaaaaaatagcaatatctataatattaaattagttttgttaagttcattattaaatatatctttgtagcatatttattttgtatgaaaatgttaaattttttatacttagtcaaatctaaaagaaggacatatataaacctaaaacaccttgtaatatggaatagagggagcgcatgctatttgagaagctctaagtgtgtatatggggggcatgacaccatggattaatcatgcatgggctaataactataccattggtctgaaaataagtcatcattttgggctcaaagtttgcaccaaaataactgatcactttaatttagaacttgggaaggaaaacaacccacataatccttgtcgctattttaatgcagccaacaacgaatggaatagtaccagtccacatgggtggagctagaacgaaataaaagaggtgtcatccacatgctttactctatttcaatcgagtttacttgatatgggtacctgaatttagattgaggagtacacatatagtaaaaatagatgagctatagctaaaatcttttcttaaacggattcctgggcaactcccccctcccccctcttctacgttggcccgcccctgccagtccacgtgagaataaagaaaataaaaaccggatgatacctgttcatgtgagaataaaaaataatataaaccaaacgaaatcaatctaccttgcactggtttccctgcatgcacaattattgaaccttttgggtatccatgtttgaaatagctaattagcgatcagtcgcacgcgtatcctcccatgcactcggtttctggacccacaaaatattctattctccgtatatatacatatatgaagtttagatgtacatgtataaatgtacacatatataaagttttatgtggatgtataaaaaatattttatatgtccaaagtgtatacatatacagacataaaatttatacatatataggtatatatatgaagtatgtacatgaaagacatagggggagctgaccgcgtgcccacacccgtgccgcgcgcggtcaatcgtgtatcagtgccccacgcatctttccatatcataaaaagctctaataaatattacttatttaattttgagaaagagaggtatcattttggttgattactgatttgtcacttattttgagaaatatcattttgcttaataagtattaatttgtcacttatttaattttgagaaagagggagagtaactcaaacttatgaaaatggctgcttgctgttgccaggtggtgacctacttcaacaagctgtgcaaggggaacaagctggaggtggaaggcaactacctgcggtccgtgttcgaggcgctgatggagcgcaacaggaaccccatgtacgcctggatccgcaccctgaggaagaagtacttcagctcgccgtgggggatcatcgccatggtcgtcaccctctttgtcttcgcctccaccgtcctgcagacctacatctccatcgtccagtactacttcgccaacaatggcgattactag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0301900, RefSeq:Os01g0301900