Os01g0302500

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Revision as of 04:36, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0302500| Description = Knotted1-type homeobox protein OSH6| Version = NM_001049362.1 GI:115436137 GeneID:4325788| Length = 7144 bp| Defini...")
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Gene Name

Os01g0302500

Description

Knotted1-type homeobox protein OSH6

Version

NM_001049362.1 GI:115436137 GeneID:4325788

Length

7144 bp

Definition

Oryza sativa Japonica Group Os01g0302500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:11215006..11222149

Sequence Coding Region

11215200..11215394,11215553..11215672,11215859..11216009,11221297..11221547,11221803..11221991

Expression

GEO Profiles:Os01g0302500

Genome Context

<gbrowseImage1> name=NC_008394:11215006..11222149 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:11215006..11222149 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggatctgtacagcatccacccggggatctcgcgggtcggcggcgcggcgagcgaggcgtccggcgtgggcgtcgtcgtcggcggcggcggcgggtcgtcgtcgtcggatctgacggagctcatgaaggctcagatcgccggtcacccgcgctacccgaccctcctctccgcctacatcgagtgtcgcaaggtgggagcgcctccggaggtggcgtcgctgctgaaggagatcggccgggagaggcgcgccggcggcggcggcggcggcgccgggcagatcggcgtcgaccccgagctcgacgagttcatggaggcgtactgccgggtgctggtgcgctacaaggaggagctgtcccggccgttcgacgaggcggcgtctttcctcagcagcatccagacgcagctcagcaacctctgcagcggcgccacctcgccgccggccaccaccgccacgcactccgatgaaatggtggggtcctccgacgaagaccagtgctcgggggagactgatatgctagatatagggcaagagcaaagctcccgcttagctgaccacgaactcaaggaaatgcttctgaagaagtacagtggctgcctcagccggctccggtccgagttcctgaagaagcggaagaaagggaagctaccaaaggacgcacggtcggcactgcttgaatggtggaacacacactaccgctggccatatcccacggaagaagataagctgaggcttgcagcgaggacaggtcttgacccaaagcagatcaacaattggttcatcaaccagaggaagaggcactggaagccatcggacgggatgcggttcgcgctcatggagggcgtggcgggtggatcgtccgggacgacgctctacttcgacactggcacaattggaccatga</cdnaseq>

Protein Sequence

<aaseq>MEDLYSIHPGISRVGGAASEASGVGVVVGGGGGSSSSDLTELMK AQIAGHPRYPTLLSAYIECRKVGAPPEVASLLKEIGRERRAGGGGGGAGQIGVDPELD EFMEAYCRVLVRYKEELSRPFDEAASFLSSIQTQLSNLCSGATSPPATTATHSDEMVG SSDEDQCSGETDMLDIGQEQSSRLADHELKEMLLKKYSGCLSRLRSEFLKKRKKGKLP KDARSALLEWWNTHYRWPYPTEEDKLRLAARTGLDPKQINNWFINQRKRHWKPSDGMR FALMEGVAGGSSGTTLYFDTGTIGP</aaseq>

Gene Sequence

<dnaseqindica>195..389#548..667#854..1004#6292..6542#6798..6986#gaattcccccatgagcctctgcctccctgcctgcccccgtatgtagcaagaacaagaacaccagcgagtaacacaggctcgctacagtggtactagattaccgcttgtgcgggcatagtgatcgtctatagttgtgaattgcgatgcagcagcataggtggtgagctgctgcggctgctgctgctggtacgtagatggaggatctgtacagcatccacccggggatctcgcgggtcggcggcgcggcgagcgaggcgtccggcgtgggcgtcgtcgtcggcggcggcggcgggtcgtcgtcgtcggatctgacggagctcatgaaggctcagatcgccggtcacccgcgctacccgaccctcctctccgcctacatcgagtgtcgcaaggtatggctaagctagtttatgctcttcctacgtgagatcgatcttggtggttgtaccttgtgaatgccaagaattgggcaaaagaagaagaatacttgttaatttgtgacactgtatatatgcgtctaattcatggttgtgtttcttggtggtttgaggtgggagcgcctccggaggtggcgtcgctgctgaaggagatcggccgggagaggcgcgccggcggcggcggcggcggcgccgggcagatcggcgtcgaccccgagctcgacgagttcatggttcgaaccctttgacacaccctgtcgcagcgatgtgatgacaattaaattcgccgtgtgatttctgtggtgaccggcgacgactagactagatttctctcctcacccagcccaatccgttgcttgattgattattattattacatgtgcacatgcgcgcgtgtgtgttgtttgttaatcacacaggaggcgtactgccgggtgctggtgcgctacaaggaggagctgtcccggccgttcgacgaggcggcgtctttcctcagcagcatccagacgcagctcagcaacctctgcagcggcgccacctcgccgccggccaccaccgccacgcactccggtaaccaacatattcactacatttgcatgcatacatggcagtagtagtactgcgcttcttgttttcttttctttttttttttttgggtatacatcgcattgtgtgtgtatgctagtagtagctttgttgctgttgggagaatggagagaaaccgtgtgcgtgtaacaatggtgttcttgtgagaggtcaaatcgtgtccatgcaaatggggagcaggagtgtcagagggagagggaagggtggagtaaaaccattgggaagttgcttgtgtagggttttgtccaaggtttgtaggcttctttctctcctttttttttctctctgcaattctacatacacatagccatatctcatcaactccgggtagttctaaattttttcttcaaacttctaactttttcatcacattaaaactttcctacacatataaacttctaacttttccatcacatcattccaatttcaaactttggcgtgaactaaacacaccctcccttgccttgcgtgtgtctcctggcccagtttagatcccactgtcacatcgaacatttaaaaaggattaaatatatgctaaaaaaataaataattgtatagattggactaatttgcgagatgaatcttttaaacctaattactccatgaattgacaatgtgatgctgcagtaaacatttgctaatgatggattaattaggcttaataaattcatctcgtggtttcgtttaccaatggattttgtaattagtttttttattagtgttcgaacaccccatgcgacaccctatataatacccgatgtcacacgcgcttatctaaacacccaagtgtttgtgtggctagctatagcctttcgtagctagtaggctggttgatggaacctgagcttgctttgacaaaagtgagaatctttgctcttgcctgcaagctatggctatggtagccacctgcggttacaaccagcggttgtgtactgagcagtgagtgaaaaaaaaaactgtaaaactaagtttttttattagggtccgtggttaggagatctcttgccggattcggttgctgtactttgacaagacgtatcaatatctcactacggtagtggtaatttctggtggtgagttttgttttctctacattttttttgttgtgtaaaaatattgttgcagtagtagtagtagtagtacaaacttgttttcttttcttctcaacacgttggaggtgtgggattggatcgcttgtctttttacggatgctaattgaaagcataatatagtagttttcacaaatctttggctataggaaatgtagtgcttatgtttgctagccatccagattcactattttatggagataactgtggttattcctgtcatatcggatgatttgaagagatgaacactgatgggacgttttgagggggtatggtagctaggcatgtaggagtagaaatttatgttaccaacagattagtagtgatatcgtacaatgccttaggctgtgtttagtttcacaccaaaattgaaagtttgaagaaattggaacgatgtgacggaaaagttggaagtttgtgtgtgtaggaaagttcgatgtgacggaaaagttggaagtttgaagaaaaaagttggaatctaaacagggccttagtattaaaggatatatttaattaaggggttattttctaaagtaacgatagacctatctcttccttgatgttgaaaactttttctgcaaattgcaaaataagattttattggattgtgaaagatgaattatttacccatgaagttgttttttatcactactactgattgagcactactgaattgcaaattgtcaaccttgctaaggtaaatctttttaataagacctgatagtaacaatagagcaatatagcgatcagtgttaaaataaaaaagttatagtaggaatattggatttttataattgatatctgaatgcttcatattaattcacttgttgttctagattgtttagcataaatcaaggtttgggaagagaagactataatgtctcttatttgaatgaaagtaggaggatggcgaggataggatgggtagaaatttgaattggatgtgattgatgggacaacttgtactcttaagtgacaactagtgtgggataaattttaaactataaagagaactattttgggacggggaaagtattatataagaagacaataattccatattttgatttgacaagattgtgcagttctctgtttttctattttttttaaaaaaaattgttgaactgagtatacagagattccaaaaggcaagtgaaattaaagatcaatatgccgatagtttgcctgttattctggattattctagcatatgcaaactggatttctggatttttggaagaattccttataattccagccgcatttttaagtagtttggagttttgcacagtaattaatatggtagatagcataatttcctgtatgcctttcatatattcatacagaaaagatgattgttatatttagcagagtaatagtgtttatgtagcaatattgcaaaagcagtacagttgacgaaataacaggaagatggacttagggtttacacttatatacaaactttcttaggtcccccacatgtcgctgggccctggccagaaggggagctagttcctaacagctaggcattcccactatgagaagaaaaaaatcacagctggggatgattggatatcgagcccattattaccatttctatccatggatatctcattttctgagtttcatctttgaagtgagcttagtgagactacaatgatcttttggcacaagtggcgggcccaatctaaaattttagatatggcacagtaaaatatatgagtaaaatttcttcaatccctccttaccaagccaattaatcacttaattaacatataatctaaattttgaagcagattagtaaagtaaagtaaagaaccaaatttccccttaagtagtaaagcggcattgcagcaagttagctcctcatcttagcgctgttaccaccctcaccaatccatgaatggctgcttggggtcctaggcagctcggatatgaaggagtatataggctatctatgcagtagtgtagctatggcagctgccacagcatgccacaagggagggtctgccccttcacatccaaaagttgtattattgcttatggacatatatcaggaattacctattcattatgctttatgtgccaaactgcttctgaaggtgtttcatgttagcttgcaaaaagtttttgtttgtgtataatttatgaactgattttattcacaaaacgctagtgataatacggtccttgacttgtgttatgcgtggtcgctcgctacacactttttctgctcttaatctattatattatcagccttaaaaggagacaccacgttcgccctagaggctagaaattcttacattaatcagagaaaaagaaaaagatattaaccgttacatcatagtgggtccggattataacggtataggttgattgatattgttgtatacaaaattcaattgtatctatagaaatagaagttaagagttgtatatgaaatctaagcctataaaaatagaatctaagagttctatatgaaaccagaccttatagaaaatataacctaagagttgtatatgaaatccaaatagacttctacatataatggtacctgtagaaacaaaatttcagagtttactctacatgaattatctagctccgtgcaaaactgcctgggggcaattacttgatggtttctgtcgtgtcaagttggcagcattgatagtctggcaaagaaggaaaaaggcaaagccttagttctgccaagagaatatatatatgtacctccaaagtaggtccaccacaagtgatagctccatgatgtatgtctgttgtttccaaaaaaaacatgatgtatgtctgctgcaggcagacctcacaatattatataggaagtatggtttggaataatatagctgtgaagacattgcaaatgggaacttttcttggatggtaaaaaatgttaatattgcggagacttgaatatgaatacagattatgtttgactgttgttggagcctatgttggtttcgtgtgaaacatgtatggcaattttcatcacctactttttattgtgaaattcggctttcactatttgaaaaggtgaactttgaatttatcattaccttttgccttactagccgtaatgtcgcatgctgccgaaacaaggaactgttttgagaatctaattgtaattgggttatagggatagaggcacttggtatttcttaaaaatgtaagtttcaaatgtacataagttgatggctttataaatataatgacatgtgagacaaggggaactcggattgcatttccttaaaagtcattgtccttactagtacactgaaacatttctccaaaagactatagtgagaaaagggttcttaattaacttataccatagggattttgcctatctgttaaataaaccttccatgcattgttgacctcatgagaacttcttgagtcgatctatgattgttgagctaacacaagatactaatactgtataacaaaagaaactctcttgatttgtaatattacatacactacactttcagtttaacaaaaaagatggtattttatacatctgcaaattgattgtttaacatggctttggttttgtttttgtccccatcttgctagtattgtccaaaatttaaaaaataattaacttagtgtttttattacagttctgcttctgtagaagttatgtagaattttctccttttttatgttctaatacatttctttggtgaactaatggcatggaaatactttgcaatatatatattacttgttttgaaagaacatcaatcaagatgctcaaattcatccctgccagtctagaatttggccctgtttttcttccttggaatcatgttctgggcttctgacgatgggaatttgggactacaagcatgctaatttttgctgctcaattctgaaggatatgggcatatggcattaattttctctaatatagcttgatacttgtttttttgaattattgatatctccatctatggaattgatttctatatatattgtgaattgtaacttggtgcgcccaacactattaattgtgaatcatgacccatattttctagttttagtttttcccatttactctgtaagcatatttctcaggaatgtcatgcaaaatggttatccctcgctcatttataatttcatggcagatgaaatggtggggtcctccgacgaagaccagtgctcgggggagactgatatgctagatatagggcaagagcaaagctcccgcttagctgaccacgaactcaaggaaatgcttctgaagaagtacagtggctgcctcagccggctccggtccgagttcctgaagaagcggaagaaagggaagctaccaaaggacgcacggtcggcactgcttgaatggtggaacacacactaccgctggccatatcccacggtaatatgatcactgtgtttccttttctgtagagatggaagtgggcaatcccgctacctatataaaaacccgcattacagttcattttctacttgctagtacaaaatttagaagaaaatatcaactaaaattgtgataagcgggcaagaaaagcccgcttgtctgccccacttgcatcccttcttttctgtaactgaaattttgtggtacattatgttagtatatattgtctgacgttgtggtgctgattgacaggaagaagataagctgaggcttgcagcgaggacaggtcttgacccaaagcagatcaacaattggttcatcaaccagaggaagaggcactggaagccatcggacgggatgcggttcgcgctcatggagggcgtggcgggtggatcgtccgggacgacgctctacttcgacactggcacaattggaccatgaattcatttttgagcaatgccgcctcttgagaaaattggccatttaggcagtaatagtaggacatggtatttggtggtgattgtgtctagctatgatcaatctttcagcaggtcagtgttattcagttcagggtaaagtaattgcctcattgttttggc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0302500, RefSeq:Os01g0302500