Os01g0305900

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Revision as of 04:36, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0305900| Description = Similar to A-type R2R3 Myb protein (Fragment)| Version = NM_001049377.2 GI:297596624 GeneID:4323911| Length = 6014 b...")
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Gene Name

Os01g0305900

Description

Similar to A-type R2R3 Myb protein (Fragment)

Version

NM_001049377.2 GI:297596624 GeneID:4323911

Length

6014 bp

Definition

Oryza sativa Japonica Group Os01g0305900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:11398566..11404579

Sequence Coding Region

11398566..11398828,11400372..11400467,11401393..11401404,11403889..11404579

Expression

GEO Profiles:Os01g0305900

Genome Context

<gbrowseImage1> name=NC_008394:11398566..11404579 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:11398566..11404579 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggagggcgccgtgctgcgagaaggtggggttgaggagggggaggtggacgaaggaggaggacgagaagctggcgaggtacatacgggagaacggggaaggggcgtggaggtcgatgcccaagaatgccggcctgctgcgctgcggcaagagctgcaggcttcggtggatcaactacctccgggccgacctcaagagggggaacatctcgccccaggaggaggacatcatcctcaacctccacgccacactcggcaacaggagaatggagatgcataccgagatgctgtcagcgacaggctttaatttagcgcagagaaaatttcccatgctgctgacagatgacacggatggcggactctcatgcctgtggtccctgatcgccggccacttgcccgggcggacggacaatgagatcaagaactactggaactcgcacctgagccggaagggatacgagttcctccgcggcggcggcggcggcgccgtcgtcgacgtcgacctcagcaagttgcccggcggcgggaagcggcgcggcggccggacgggccgcagcagcagcgggaaggagaagacgaggacgaaggagaaggacaaggcccccgctccagaagctgcgcacaatgacgacggcggcggcggcggcggcggcggcattgacaacgtctcggcagctagccacagccacagggaggagcaggcacaggcgagcgccagtggtctcacatcagatgggctcgaggagggcccactgggcctaagcgaggagatggtgagtgggcccgtgggaccggtgagcccaaagcctgaggtgggccaggatgggtcttctgcagagagtggctgctgtgggcctagtggatccagtggcccaaccgaggctgtgggccaggacatgggcgacaagtccatggactgggacctggtgggcctggacgatggcttcgccaacgatgacatgtggggctcactctcctgggactacggggagttggtgggcccggatggagttcatcagggcgaggtgctatccgacttgttcttcttgggcaacctgtag</cdnaseq>

Protein Sequence

<aaseq>MGRAPCCEKVGLRRGRWTKEEDEKLARYIRENGEGAWRSMPKNA GLLRCGKSCRLRWINYLRADLKRGNISPQEEDIILNLHATLGNRRMEMHTEMLSATGF NLAQRKFPMLLTDDTDGGLSCLWSLIAGHLPGRTDNEIKNYWNSHLSRKGYEFLRGGG GGAVVDVDLSKLPGGGKRRGGRTGRSSSGKEKTRTKEKDKAPAPEAAHNDDGGGGGGG GIDNVSAASHSHREEQAQASASGLTSDGLEEGPLGLSEEMVSGPVGPVSPKPEVGQDG SSAESGCCGPSGSSGPTEAVGQDMGDKSMDWDLVGLDDGFANDDMWGSLSWDYGELVG PDGVHQGEVLSDLFFLGNL</aaseq>

Gene Sequence

<dnaseqindica>1..263#1807..1902#2828..2839#5324..6014#atggggagggcgccgtgctgcgagaaggtggggttgaggagggggaggtggacgaaggaggaggacgagaagctggcgaggtacatacgggagaacggggaaggggcgtggaggtcgatgcccaagaatgccggcctgctgcgctgcggcaagagctgcaggcttcggtggatcaactacctccgggccgacctcaagagggggaacatctcgccccaggaggaggacatcatcctcaacctccacgccacactcggcaacaggtagtaccttcttactttgcccctccattacttcaatctgcatatggttcatatatctatacacacacgatcgctttggcatttctccgttttgttttgatacgaatcacacgaagttgagatttgagaaagagctaggaaacgaagcccctgaatcttagccgccgcctagtagttttacaagctcgtctgcctctgagcattgttcgtctttgttttggaaaaaaaagattgtccccacagcttcgaatggcttcctcttcctatcagaaattagaatcgggagctcgaagcacatgttaccaagcctgctttcgcaagtctgatgatctagagtctctttcgctctgaaatgatgcagaaacgccacatacgagagcctgcgatacctggttctcgtgcttcctgcacttttctgcttttttttttgccggttaaaaagtcataatcatatagtaacatactcctttttttttgccggttaaaaatacagaagacacgcagataggattatttactagtactacaaaaatggagtgattgcatttacgtttatacaagaaatgccgattgatcgattccctgcgactctgctcttgaagtacccaagggcaaaagcctggatcttccctttgtcttagagcgaattactcccattcttttttttttaccttcccctgccctttaactacagttcctccatgaccaaaggccaaagaacagaagaaggccagcctccatggctccatcctaataacctttgtcttggagcgaaaatttaccaccgtaaatcacgctgttttacctcgccaatccccctgggtcgctttccacgcgccgggtcacgctcgtgttttttctatgggctaacccgaccgcgcgtgattcacgacacgccggactttcatgccaagacgctgatcgatatatcgatccacgtggagtagttctttcctggtgaagacataatttatcttgatttttttctatcatatttttttaaactgctaagtgtgaatagaatttgttttaaaatatcagataatttttaaaaataattaaaccttaatatgtaatataataatagtttcctttttatattttacgtgttttttttagaatgccatttggttagcttttatggatcattaaatatagttctatcgtttgtgaaagtgcttagaatatagccaagaggttcatcgacccaagtacaagactctttcctactaaaagctaccctggccaattcatgagcaactttatttgctcccctgttgcaatgttcaatagatatgctatccaaacctctttatattagattacattcttcgtaaatagctactgaggctgttgccgaataatctccattcaatatagtacctgcaagcaatctgactaaaaaattacccgtttaattctcaatctttagtgaactcaaacgggggcttaaacccactgtcgcgtaaccaaaggctcactcgcctcagccgtagtatgacagtatttagtgctgcttagcgtaagcgggaaatacttgcaggagaatggagatgcataccgagatgctgtcagcgacaggctttaatttagcgcagagaaaatttcccatgctgctgacagatgacacggatggcgggtccgcttccgctgtcgttagctagggtcccatttgattcggactgattagtactttgatctccaattttttttcccttaaagaaagacgcagatttgagcttggctctttatggatgattaaatatattatagccaattatttacagggtttacatgtaagtaatccatgtgaaccgtggtacgcgtaattatttgtgagtccataatctgaaaataatgcagtccaagtatgttattgtcatcacattaactttttaagtcctttttcaccataaaataccttagcttttaaaatggtccagtaacatgatccttatggtgacgttatactctactgtattcaacaaaatgtacttcttaggagtctgtatcaatgataatcacaatcgtactgtaccactcaatacaaccataaagatgttattgtaccattttaaaaggtaaagagattttacggcgaataaggacttaaaaaagttaatgccatatgacaacgacatatttagcttgatcgtagtattttcagattatggactaataagttacacgtgttctcaaactactatttgaccaacaactttctacctcagtatatattgagtagatagctcattctaagctactccctctccctccagtgcgtagtcaaacttttataattttgactctttagtttaaaagaactaaaacaacatatatggatttgtttttcaaagttctacaaagtaaatatgcatttatttattttatatacattataatagaaaacaaggtcaatgatatattacgaagatcgtgttattatccaaaacgtcaagaattatggaaggagagagtgtcttttaggtttataatatataataattgatatatagttaatctttaggcattgaatgatacgattgtgatttttattgatacagactctcatgcctgtaagttttgtacgtgtaagttttgttgaatacagtacagcatattgaaggctcaatttacctaattttaaaaattaagtgcggaaaaaccattttctttcaataaaaagtatgcctagggaagaatgagatctgctggtggtatatcaaagactttaccataaataaataatgcacgagatttgatggcccaactgctaggagacatactttgacgtatttttcacattattgatttaattataaataccactccactaggatatactctcctgtctcaaataagtgtactcctctaatttagggccctttgaatcgcaggattaagaaaacgtaggaataggaaaaacgtaagattttgataggaatgtaagtgtaaaacagaggattgcaaaacacaggaaaaacatagaaatgaccgtttgattgaaccacaggaaaaacacaggaattggatgagagagatagactcaaaggaaagttagcaagaggttgaagctcttgctaaatttccttcaaaatctctataggattgtccattccataggaatttcaaaggattggataggattcaatcctttgtttcaaaggtttcataggaaatttttcaataggattgaaatcctctaaaatttctatgtttttcctccaaatcaaaggagcccttaaaatttaaactagtggagtgcacttgttttggaatgaaggaaatactgtataagggctttgaaggaagtatcgttgacttgagaaaagcacaatacaatgactaatactccatctttttcataatgttatctatttagatttattaacatcaatatgaatatggaaaattctgaaatgacttatattgtaaaacggaggaagtactttactagagcaaactacgccatccattttataatacatgatgtattttatttattttgttaggagaagattttaactaataatttactctactatggattatattttttgtggagcaaaattgatgctactagttcgtattcaaaagtattttggtatgattatatttttttataatcatactattttgtcatataagtgatttataagggaatcggttgtttgtcaaaaccatgtcctaccgaaataaaatacaatctccgttccaaaatgttttacgccgttgacttctttaaaaatgtttgaccgttcgtcttattcaaaaaatttaagtaattgttaattctttttctatcatttgatttattgttaaatatacttttatgtatacatatagttttacacatatcataaaagtttttgaataaaacgaacggttaaatatatttaaaaaagttaacggtgtcaaacatttagggaaggagggagtacgtcctatgtttaaaatggagggagtaatggtttacacgttgaggtggcgcacgaatcaggcgaggaacgtgagctgcaagtagcccagcacgaatgggcgccttgtgggctatctattgattatactactactactaatctactatatttccacgcgtagcacgccgtaatacgtgtccggttcgtatatattcgtacatgacatgcggttatgataatactcgtagagtatatcatttggttccaatcttagcctcgtttttcacgtggaaacttgatagaaaagggtttgtcggtgtttggctcctagctcgacgagaacgggaacggggtgcgcgcggcctctcgtttttgtttacactctgctgggctcagcttcatattatagcctgattttggtttgatttttggattaaaatgttgagagttctttcccttctttctttttttcctaaaaaaagagagtatatgtgtcggtagtggggtcaacaaagacaggggacttttaactcgtcttgtctcgatggatttaaggagaaagggactctgttcccatcgttggactgcctgtcattttttgcatgaacgagtgcagcatgtacagggttgcggtagcacgtagcagcagcagtagtacgtggccaagctgctgacacgatcagcaacttgccttggctagacatttttggccactatggcgtaaatgccgcggatggcgagcatgctagaagccaagaaaagcgattttaaaatcatgcacgcacgtatccttccctttcatagctgcgaccgagctttcatcaatgtggcgggcgatttcacttcacttcaaccgcgtaagtaaacatactactgctcggtggttggatcgccagcagcgcgcattcattgccggcatgtggctgtgccgccgccgttactctcgccggggccggcagcagcatcgctgcaacggcgcacgcatgcaaaacagcaaaagcatccccagccagccagccatatgccgttttctcctcgcagtcgcagcagtgcaggatttcaaagtacagaattactacatgcttgttagttactgctgtgaatccgtgattgattggttctccgttttctcgccatcaggtggtccctgatcgccggccacttgcccgggcggacggacaatgagatcaagaactactggaactcgcacctgagccggaagggatacgagttcctccgcggcggcggcggcggcgccgtcgtcgacgtcgacctcagcaagttgcccggcggcgggaagcggcgcggcggccggacgggccgcagcagcagcgggaaggagaagacgaggacgaaggagaaggacaaggcccccgctccagaagctgcgcacaatgacgacggcggcggcggcggcggcggcggcattgacaacgtctcggcagctagccacagccacagggaggagcaggcacaggcgagcgccagtggtctcacatcagatgggctcgaggagggcccactgggcctaagcgaggagatggtgagtgggcccgtgggaccggtgagcccaaagcctgaggtgggccaggatgggtcttctgcagagagtggctgctgtgggcctagtggatccagtggcccaaccgaggctgtgggccaggacatgggcgacaagtccatggactgggacctggtgggcctggacgatggcttcgccaacgatgacatgtggggctcactctcctgggactacggggagttggtgggcccggatggagttcatcagggcgaggtgctatccgacttgttcttcttgggcaacctgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0305900, RefSeq:Os01g0305900