Os01g0306900

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Revision as of 04:36, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0306900| Description = Protein of unknown function DUF789 family protein| Version = NM_001049382.1 GI:115436177 GeneID:4327756| Length = 45...")
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Gene Name

Os01g0306900

Description

Protein of unknown function DUF789 family protein

Version

NM_001049382.1 GI:115436177 GeneID:4327756

Length

4550 bp

Definition

Oryza sativa Japonica Group Os01g0306900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:11474403..11478952

Sequence Coding Region

11474784..11475022,11475175..11475266,11475341..11475426,11475522..11475738,11478265..11478473
,11478586..11478816

Expression

GEO Profiles:Os01g0306900

Genome Context

<gbrowseImage1> name=NC_008394:11474403..11478952 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:11474403..11478952 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccgtccccggcgtcgcctcccgcgccgccgaccgcttctactgcccgccgccgcgccgccacctgctccaccaccaccacaaccaggcgtctaaggcggcggcggcggctgtagagaggcagccgaggagcgccgcggcggcggcgaaggaggaggaggaggagaccaatctcgagtgcttcatcgcgtccacggccgtccgcgttcccgcgcatcggctcccccggacgagctcgagctcgcgggagaggggagcggccggggcgccgccgtactacgagctcgcggatctgtgggaggcgttcgcggagtggagcgcctatggcgccggcgtgccgctcctgctcaatggcacggacggcgtcgtgcagtactacgtccccttcctgtcggctatccagctgttcgctgcccggccgccgtcgtcaacctcaggtagacttggtgaagatagtgatggtgagagtgctcaggatatgagcagtgagagcgaccatgagcatttaagatgccgatgtttagttaacagtatttctgcagatcaagatggtttctccagtgatgatagtgagtctggcaaccaggaattgtaccctgttttccaatatatggagcatgatgcaccatatggaagacaacctttagcagacatgatatcattacttgctaatagatttcctgatttaagaacatataagagctgtgatcttctaccatccagttggatttctgtagcatggtatcccatatacaggataccgacaggaccaacattgaaagatttggatgcttgctttttaacattccattcactatctacaccagcggaaggtacactaagtgggcatcctgagacaaatgttttccatgatagcaaaatttatgatgttcctggaaaggtcacactgcctctcattggtctagcatcacacaagtttaatggttccatgtggacatcaaatcaagagcatgagcaacagttaactaagtcgctcctgaaagctgcagatgactggctttgccagcggcgagtcaatcatcccgattaccgcttcttcctttcacactaa</cdnaseq>

Protein Sequence

<aaseq>MSVPGVASRAADRFYCPPPRRHLLHHHHNQASKAAAAAVERQPR SAAAAAKEEEEETNLECFIASTAVRVPAHRLPRTSSSSRERGAAGAPPYYELADLWEA FAEWSAYGAGVPLLLNGTDGVVQYYVPFLSAIQLFAARPPSSTSGRLGEDSDGESAQD MSSESDHEHLRCRCLVNSISADQDGFSSDDSESGNQELYPVFQYMEHDAPYGRQPLAD MISLLANRFPDLRTYKSCDLLPSSWISVAWYPIYRIPTGPTLKDLDACFLTFHSLSTP AEGTLSGHPETNVFHDSKIYDVPGKVTLPLIGLASHKFNGSMWTSNQEHEQQLTKSLL KAADDWLCQRRVNHPDYRFFLSH</aaseq>

Gene Sequence

<dnaseqindica>3931..4169#3687..3778#3527..3612#3215..3431#480..688#137..367#ataattcgcaggccgtcgcttgctctaccacagcagccgccgcaaacgacgccctcttttctctgtctccctccctcctcctgccgctcacatcaaaatccttctctctctcgcggcgctcggctgaagcccagccatgtccgtccccggcgtcgcctcccgcgccgccgaccgcttctactgcccgccgccgcgccgccacctgctccaccaccaccacaaccaggcgtctaaggcggcggcggcggctgtagagaggcagccgaggagcgccgcggcggcggcgaaggaggaggaggaggagaccaatctcgagtgcttcatcgcgtccacggccgtccgcgttcccgcgcatcggctcccccgggtgcgtgtcctcgagcggaggaggaggaggcgctggatttttttttttgagatttttactgctaagctgacgcagtttctgttgggggtggtggttgcgtatgcgcgtgcagacgagctcgagctcgcgggagaggggagcggccggggcgccgccgtactacgagctcgcggatctgtgggaggcgttcgcggagtggagcgcctatggcgccggcgtgccgctcctgctcaatggcacggacggcgtcgtgcagtactacgtccccttcctgtcggctatccagctgttcgctgcccggccgccgtcgtcaacctcagggtataaacctctctctctgtctgcctaaatatgaacggcactgcggtctgagtgctcagaactgtggatatatctggaacggcaacttatatacctaactggatgaagcaaaccaagagaggattattaatttgatggaatccatgaaatgcgtatccagtattttgtagaatcaaatgagttcaacattggtagataatggcttacccttttgtgtggttgttgggatgttaggctagggccgagcaggtatggattggcttgtcatttttttcaccatgtgtgaaatgggagaatttcccagtttttttttttttgtgtatagtagattttgtataatcaaagtatgtttcctcactagccgtaaatagtatatgacaatctgcagctcacttaggcaaacaacactatcagtagaagataaaaattggcaaaaaaagtacaccaacctgagaagtcgtatcgtggatggaaaggttgatgattagatgaaggtaaccaggttgagaagccgctgttgctgcctcctccctagaggtcatggtcatctcctgcaagcatgggtcacgctagtgacttgtcttgtgatgcatgtagcttgttgttgctggtgcctccagctgccactggttgacaggaggtggggggcctggttatttgaaaagaatgtgatgagaacaagccattatggcagagagggagagcattcaatgtgtggagcaaggggtagagtcgtagagaatctgatatacggagtacttacaagtacatatccactatacataaaaatggctattggttgggttatcaatcactgacccggatttgttgggttcatgtcccatgtcagtcccaaactatggtctcaaagaggtataccctatgataccatactcgacccaatcgatccgggttcatggtgatctttgtagagattagagaacaccttttgatgacccatactgtgtggactcctgaccaagtaacataggaatagtaatctgtagtttccatttcccatattacagctggagaggagtggcattgtttgtaatagccacacctctgctaagtgttgtagttagcaattgcctttaaagagttaattttctagatatggatcagaactgcagctcatgcatgttttttctgtaaggtttgcattcttctctaactcgtagagctaccttacatatgacgtcacacatggccatgtctcatggtctggttgcatgtggtatctacacacatccatttactacactagtttgtatgtgaagatttttacttttctctgaaataagaagtaaaagacacagcattctggcaaatcatgattatcacaaagagctaacatatagtgatataacatcgtaacaagtccttggattgtactctctcttattgcttgtatgtgaagatttttacttttctcttattgctgcatgtgcaccccacaccaaccatttgaaatccgctgatccaatttgaaccacagttgccgtaattcgtgatttgcaatctactaattcctaaaactacaattcatcagggcctcaggctcagggtcctctgtgatttgcaaatcagagatgaggtttgtggccctggtgtttttggttcacatgtgctaaatcagagatgaggtggggagatgaggtttttagtacattgaggaaccattgtcctggacacatgtactcaaccttaatctcgactaaccatcctagcaatggttatatttgtggacggaaggggtatgaaatgattgtgctagccatcctatccctgaaaacatgagaattgaatatcatggggctgtgactgagtggtgggcctgaccacataacaagcccaggaaggaccctaactccttctagctcactacatacagtcattgcctctccctctagctacaacaccctgatgccacctcctcctccccacttctctgaggattgtgctcatgatagaggtgctatcttcctctttcctttgccatctcgatgcaaatttgaatgtgtattggtgtgaattagattgaccacgtaccatgatggcgtggcagccatttacaacatttgcggtttgtgggggatttctgcgaattcagtaaatatggtgtgaacaaggaaaactgtgtaccacagtcagtaactaggtatggatatggtggcatacaggcatacagcagtgcttgtagagcctaacactgctattatcctgtaatggctataactgtgaatgggagtctcatttaaacataatattgaccaatctatatcataagcagttagcagtgtgatgcagggcttcgatcatgcagtattagtagctacacttgttatttaaagtccataaatttcctaaatgtgaccatattaatcttaatatgtttccaagtttcagtatttactcttggttgatgtttgaacacatccttttgttgtacacatctttctttttttcctttgagagacaatgaaatttatttctgaaaatagttttacctgtttttaatttcagtagacttggtgaagatagtgatggtgagagtgctcaggatatgagcagtgagagcgaccatgagcatttaagatgccgatgtttagttaacagtatttctgcagatcaagatggtttctccagtgatgatagtgagtctggcaaccaggaattgtaccctgttttccaatatatggagcatgatgcaccatatggaagacaacctttagcagacatggtacacttctttttttttttaatttcttttcttctggccaatgaatattgcagctgcaaccaagatgatgggttttcttctgtttctggctgcagatatcattacttgctaatagatttcctgatttaagaacatataagagctgtgatcttctaccatccagttggatttctgtagcatggtattccctgttactccttaactactagatccattgcctcacaggttgtcttacccattggacgttggatgcaggtatcccatatacaggataccgacaggaccaacattgaaagatttggatgcttgctttttaacattccattcactatctacaccagcggaaggtaatcccctttttgcgctcaaagctagacaagatgttgctaattgattttatatcacgtactaattagatatctttttacatctaaaagaaaataactgagcaattaggaaactggaatcatacagctaattaatatgcaacgttgggcaggtacactaagtgggcatcctgagacaaatgttttccatgatagcaaaatttatgatgttcctggaaaggtcacactgcctctcattggtctagcatcacacaagtttaatggttccatgtggacatcaaatcaagagcatgagcaacagttaactaagtcgctcctgaaagctgcagatgactggctttgccagcggcgagtcaatcatcccgattaccgcttcttcctttcacactaatacacatgtttgtgaaagttccctgcgttttggcaaatagctcagccagatgcccactaattaagtgatgaacttaacatactgccattgagtccacgggcactgatatcattatctctttttttattattattatggggcttcatttatgttatagccccatatttatttttacctagatctgcttagttcactggtattttgggttactttatagtaactagttagataggggtcaccagaattatttagcatctcgtaagatgcttttgagtggatggtatgtggcagagctaggtaggcagtgagtggttagagatgtatatcggtctgcttcagatatagtgatgatgatgataaagtatttcaacattttgtttt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0306900, RefSeq:Os01g0306900