Os01g0307500

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Revision as of 04:36, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0307500| Description = Cation transporter family protein| Version = NM_001049383.1 GI:115436179 GeneID:4327757| Length = 4487 bp| Definiti...")
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Gene Name

Os01g0307500

Description

Cation transporter family protein

Version

NM_001049383.1 GI:115436179 GeneID:4327757

Length

4487 bp

Definition

Oryza sativa Japonica Group Os01g0307500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:11506912..11511398

Sequence Coding Region

11507243..11507441,11508119..11508349,11509997..11511231

Expression

GEO Profiles:Os01g0307500

Genome Context

<gbrowseImage1> name=NC_008394:11506912..11511398 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:11506912..11511398 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagttctctggatgccactactcctagatatgacgagtttaaaaggatctaccaccttttccttttccatgcacacccattctggctccaactgctgtacttcctcttcatctccctcttgggtttcttgatgctgaaagctctgccgatgaagaccagcatggtgccgaggcccatggacttggacctgatcttcacgtcggtgtcggcgacgacggtgtcgagcatggtcgccgtcgagatggagtccttctccaactcccagctcctcctcatcaccctcctcatgctgcttggtggtgaggtcttcaccagcatccttggcctctacttcaccaacgccaagtactcctccaagatgatagcaaccttacctgatgatgacgaccatggtggcagtggcaaaccaccaccaccaacgacgtcaccttcgtctaccctagtggagctcgagctcgctcctcccatggacgtcgtcgtcgtcaaccctaccaccactgcgacgacgcacgacgaggtagagctagggttaggacgtcggaacaagcgcggctgcacctgcactactactcacacgtcgtcgtcatcatcggcatcgaagacgacgacgacgaggctactgatgttcgtggtgatggggtaccacgcggtggtgcacgtcgccgggtacacggccatcgtcgtgtacctcagcgccgtcggcggcgcgggggcggtggtcgccgggaaggggatcagcgcgcacacgttcgccatcttcaccgtcgtctcgacgttcgccaactgcgggttcgtgccgacgaacgaagggatggtgtcgttcaggtcgttcccggggctcctcctcctcgtcatgccgcacgtcctcctcgggaacacgctcttcccggtcttcctcaggctggccatcgccgcgctcgagagggtcaccgggtggccggagctcggcgagctcctgatccggcggcggaggggcggcggcgagggctaccaccacctgttgccgagctcgcgcacgcggttcctggccctcaccgtggccgtgctcgtggtggcgcagctggcgctcttctgcgccatggagtggggctccgacgggctgcgggggctcaccgcgggccagaagctcgtcggcgcgctcttcatggcggtcaactcgaggcactccggtgagatggtgctcgacctctccaccgtgtcgtcggccgtcgtcgtgctctacgtggtgatgatgtacctgccaccttacaccactttcgtacctgtccaagacaaacaccagcaaacgggagcacagtccgggcaggagggcagcagcagcagcagcatatggcagaagctgctcatgtcgccgctctcgtgcctagccatcttcatcgtcgtcatctgcatcacggagcggcggcaaatcgccgacgaccccatcaactacagcgtcctcaacatcgtcgtcgaggttatcagtgcgtatggcaatgtggggttcagcacggggtacagctgcgcgaggcaggtgaggcccgacggcagctgcagagacctgtgggttggcttctcagggaagtggagcaaacaagggaagctcactctcatggccgtcatgttctacggcaggctcaagaagttcagcctgcacggtggtcaggcatggaagatagaataa</cdnaseq>

Protein Sequence

<aaseq>MSSLDATTPRYDEFKRIYHLFLFHAHPFWLQLLYFLFISLLGFL MLKALPMKTSMVPRPMDLDLIFTSVSATTVSSMVAVEMESFSNSQLLLITLLMLLGGE VFTSILGLYFTNAKYSSKMIATLPDDDDHGGSGKPPPPTTSPSSTLVELELAPPMDVV VVNPTTTATTHDEVELGLGRRNKRGCTCTTTHTSSSSSASKTTTTRLLMFVVMGYHAV VHVAGYTAIVVYLSAVGGAGAVVAGKGISAHTFAIFTVVSTFANCGFVPTNEGMVSFR SFPGLLLLVMPHVLLGNTLFPVFLRLAIAALERVTGWPELGELLIRRRRGGGEGYHHL LPSSRTRFLALTVAVLVVAQLALFCAMEWGSDGLRGLTAGQKLVGALFMAVNSRHSGE MVLDLSTVSSAVVVLYVVMMYLPPYTTFVPVQDKHQQTGAQSGQEGSSSSSIWQKLLM SPLSCLAIFIVVICITERRQIADDPINYSVLNIVVEVISAYGNVGFSTGYSCARQVRP DGSCRDLWVGFSGKWSKQGKLTLMAVMFYGRLKKFSLHGGQAWKIE</aaseq>

Gene Sequence

<dnaseqindica>3958..4156#3050..3280#168..1402#gctgttgctcttgttcacttgtgctcacagcacctggtaaccccacatacagtgatcacacaacaaacaatatctgttgtttgtgtataaatagccctaacatggcttcctaattcctataaacaacaagtgtgagaaaacccaagaacgaaacacataggagagaaatgagttctctggatgccactactcctagatatgacgagtttaaaaggatctaccaccttttccttttccatgcacacccattctggctccaactgctgtacttcctcttcatctccctcttgggtttcttgatgctgaaagctctgccgatgaagaccagcatggtgccgaggcccatggacttggacctgatcttcacgtcggtgtcggcgacgacggtgtcgagcatggtcgccgtcgagatggagtccttctccaactcccagctcctcctcatcaccctcctcatgctgcttggtggtgaggtcttcaccagcatccttggcctctacttcaccaacgccaagtactcctccaagatgatagcaaccttacctgatgatgacgaccatggtggcagtggcaaaccaccaccaccaacgacgtcaccttcgtctaccctagtggagctcgagctcgctcctcccatggacgtcgtcgtcgtcaaccctaccaccactgcgacgacgcacgacgaggtagagctagggttaggacgtcggaacaagcgcggctgcacctgcactactactcacacgtcgtcgtcatcatcggcatcgaagacgacgacgacgaggctactgatgttcgtggtgatggggtaccacgcggtggtgcacgtcgccgggtacacggccatcgtcgtgtacctcagcgccgtcggcggcgcgggggcggtggtcgccgggaaggggatcagcgcgcacacgttcgccatcttcaccgtcgtctcgacgttcgccaactgcgggttcgtgccgacgaacgaagggatggtgtcgttcaggtcgttcccggggctcctcctcctcgtcatgccgcacgtcctcctcgggaacacgctcttcccggtcttcctcaggctggccatcgccgcgctcgagagggtcaccgggtggccggagctcggcgagctcctgatccggcggcggaggggcggcggcgagggctaccaccacctgttgccgagctcgcgcacgcggttcctggccctcaccgtggccgtgctcgtggtggcgcagctggcgctcttctgcgccatggagtggggctccgacgggctgcgggggctcaccgcgggccagaagctcgtcggcgcgctcttcatggcggtcaactcgaggcactccggtgagatggtgctcgacctctccaccgtgtcgtcggccgtcgtcgtgctctacgtggtgatgatgtatgtatatttgtcctcctcaattattatatttttgacaggccctccttaatatattaattactatcacatgcatgtgtgcacacgtaaaaactaaataaattaccatatcatacatgtgggtacttaatttagtactctggcctgggacatattttaaatcctattggacatctcctttcaattttttttttgaaacaaagtaaaaacgcaggcgcttataacgcgtgcacactcacccttatgaatacaaatcttacccctataagtaccttcgaaagactgagctgacatatcttgagattgacgaagtcatcacgggtatctcactgtcaacaagtacatcactacctaccactaaaagaataattagccataaatacaagcacccgtgtcaaatttattatttgaatctttcattctaattatatgcgatcaaaatagttatgaaaaattctactttatatgggggtgcagggtctcgaggcatctaaatagttatgaaaaaatctataaaaatataagagatatatggtcttcgatgctgtggcacaagtggactagtggttgtcattttacgcgctcaaaatgtaaccgaacgaggcgccgtcatggatcactatcaaaagcagcttagtaccgaattaacatatgtggctacaaatgctaatcagctaaatgataggaaagattgattgctactgatagacatggattgacgctttcagtttgttggagcccttgatttggcactttcacgacgataatccgcaaggataattctccaagtcatattttgcaacaaaatacaactacatctagtttaatttcctctaagttagtaagttgtgactgcaaattaacaagtgtattgatgtccgaaacctagctagatgaaggttatgtacattggatagggatcgaaagaaaatagacagaaacagagaacgataagtcaactgcaagcacatactcccttcatactcataaaggaagtcgtttaagacaatgtttaagtcaaaccttgagattataaatcataaataactctcaagttgttgagtttgaaaatgtaaaaattatatgaataaatttgtcttgaaaaatactttcataaaagtatacatatatcacttttcaatgaatatttttatagaaagaagaagtcaaagttgtattttggagaccgtgtcgatgtcctaaacgactttctttatgaggatggagggagtatatatactctgtacttaagtatacgataatgttatctttgttcagtgaaacttttggaactttgattgttactagctatcaaaatgtttagtttgagaatataaaaattattaatattataattttgttagatattatcgttatgttttaataaaacaacggtggtcaaagtagtacacaccaaacaccgaatgaagtcaacatcggtgtgtgtatatatatacgcggaggtagtacatggtacaacttttgaattaaactcccgaaaaacatatgttctcatgcatgcttttgtatacagatatgatatagctctaaattaataacttgcatgacggaaattgaacatatttgctacactgaattatactgcgtgaaccttaatttgcttatatattctcatgcttgctgcaggtacctgccaccttacaccactttcgtacctgtccaagacaaacaccagcaaacgggagcacagtccgggcaggagggcagcagcagcagcagcatatggcagaagctgctcatgtcgccgctctcgtgcctagccatcttcatcgtcgtcatctgcatcacggagcggcggcaaatcgccgacgaccccatcaactacagcgtcctcaacatcgtcgtcgaggttatcaggtacgcatagtggtggtctaaccttaattttaactgctggcaagtgccaaaaaattactctctccatctctaaatatttgacgccgttgactttttaaaacattttgaccgttcgtcttatcaaaatttttaagtaattattaattcttttcctatcatttgatttattactaaatatatttttatgtatacatataattttacatatttctcaaaagtttttgaataagacgaacggttaaacatgtttaaaaaagtcaacaacgtcaaatatttagggacagagagtatatttcccccttgagggtacatacatttctcctcgtttttatatgtcatcccaaaaattacaaaagaaaatctaaaagttattgataaaatggacatgtgatatattactacactaatatatacacgttcaaatataacttgaacacatgttagaaaaacacaataaatttaactataaatggcatgttcaattcgcaattaaatttaatattttatttctgtttgaacaaattgaatatcatatatttaaaaagagattaattaatgattttttaaacgaatggataaaataagagaaagtgaggaaaatccacatccacggagataatatatataactagaaccatcgtgtaaactaactatatgttacatactcctggatgcagtgcgtatggcaatgtggggttcagcacggggtacagctgcgcgaggcaggtgaggcccgacggcagctgcagagacctgtgggttggcttctcagggaagtggagcaaacaagggaagctcactctcatggccgtcatgttctacggcaggctcaagaagttcagcctgcacggtggtcaggcatggaagatagaataacgcctaactgcaagcacccatgcatgcatgacaacttcgttactaattaatggggcatttcagccggccgccgtactagactacaagagatcgatcgataggtctcccctcctaaaactcctccttaatctgatctccacgagttcttgatcagggttacttatatattataaaggaatgatcagataaatatatgtctatatcaggatctggtcgatctctagatatctgtcttttttttttttgggtaatgcatgtaagcaagtagcaattgctagacatatatatgtgttagcttacgagagtatatactggcgcttgagtcgtgatg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0307500, RefSeq:Os01g0307500