Os01g0311700

From RiceWiki
Revision as of 04:37, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0311700| Description = Pectinesterase inhibitor domain containing protein| Version = NM_001049399.1 GI:115436211 GeneID:4327281| Length = 1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0311700

Description

Pectinesterase inhibitor domain containing protein

Version

NM_001049399.1 GI:115436211 GeneID:4327281

Length

1025 bp

Definition

Oryza sativa Japonica Group Os01g0311700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:11856309..11857333

Sequence Coding Region

11856387..11856733,11856858..11857101

Expression

GEO Profiles:Os01g0311700

Genome Context

<gbrowseImage1> name=NC_008394:11856309..11857333 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:11856309..11857333 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcttcctccccgtatcacgccgccgtcggtgtcgccgtccttgccatcctcctcgccgcgccggctgcggaggccggggcacctaccgccgcgccgttggccaactactccctcgaggacgcgtgcaagaagaccggcccacactacggcctctgcatcgtgacgctctccgccgaccggtccgccaagtcgtcggacacggtggggctcgccagggtggccgtcctggcggcgcagaagaacgcgtcggagacggccacctacctctccagcatctacgacgacgacagcatcgagaagaagacggtgcagctgcagcagtgcctcgaggactgctccgagaggtacgaggcggcggtggagcagctgacggacgcgacggtggcgctggacacgggggggtacgaggaggcgatggcgctggtggcggcggggcaggcggaggtgaagatgtgccagagggggttcaaggccgtgccgcagcaccggaacatcctcaccttgcgcaaccgcgaggtcgaccagctctgcagcatcgccttcaccatcaccaagctgatccgcgtgtcaccgagcgctgaagaatag</cdnaseq>

Protein Sequence

<aaseq>MASSPYHAAVGVAVLAILLAAPAAEAGAPTAAPLANYSLEDACK KTGPHYGLCIVTLSADRSAKSSDTVGLARVAVLAAQKNASETATYLSSIYDDDSIEKK TVQLQQCLEDCSERYEAAVEQLTDATVALDTGGYEEAMALVAAGQAEVKMCQRGFKAV PQHRNILTLRNREVDQLCSIAFTITKLIRVSPSAEE</aaseq>

Gene Sequence

<dnaseqindica>79..425#550..793#gcgtccaacgtgagcaacatcaccgaagccggtcgctgatcggaggaaaacccaaaaaagaaagaaaaaaacgacgaaatggcttcctccccgtatcacgccgccgtcggtgtcgccgtccttgccatcctcctcgccgcgccggctgcggaggccggggcacctaccgccgcgccgttggccaactactccctcgaggacgcgtgcaagaagaccggcccacactacggcctctgcatcgtgacgctctccgccgaccggtccgccaagtcgtcggacacggtggggctcgccagggtggccgtcctggcggcgcagaagaacgcgtcggagacggccacctacctctccagcatctacgacgacgacagcatcgagaagaagacggtgcagctgcagcagtgcctcgaggactgctccgagaggtaacgtgttttcgtcgtatacgcaacgagaatcaatacacacgtacgccgggcgccggctatcgatggttgggtgccaggcgcgatgaatgaccggtgttgtacgtacgctgtggtgatgaaggtacgaggcggcggtggagcagctgacggacgcgacggtggcgctggacacgggggggtacgaggaggcgatggcgctggtggcggcggggcaggcggaggtgaagatgtgccagagggggttcaaggccgtgccgcagcaccggaacatcctcaccttgcgcaaccgcgaggtcgaccagctctgcagcatcgccttcaccatcaccaagctgatccgcgtgtcaccgagcgctgaagaatagctttctcttcttccttttatcccctggatattcttttttattttttcgacgacaggggtaatctgggattccatggttggaagattagcatgtttgttgatggctttgaattggattggtaattgctgtttgcatcagcagacaacatcctaggcgctggcggtggtggaactgttgttgggttcatacgatcaatgtatagcacattcttgatcttaaaaagagcattgct</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0311700, RefSeq:Os01g0311700