Os01g0315800

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Revision as of 04:37, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0315800| Description = UDP-glucuronic acid decarboxylase (EC 4.1.1.35)| Version = NM_001049411.1 GI:115436235 GeneID:4327295| Length = 4052...")
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Gene Name

Os01g0315800

Description

UDP-glucuronic acid decarboxylase (EC 4.1.1.35)

Version

NM_001049411.1 GI:115436235 GeneID:4327295

Length

4052 bp

Definition

Oryza sativa Japonica Group Os01g0315800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:12049523..12053574

Sequence Coding Region

12049915..12050205,12050614..12050688,12050790..12050873,12050968..12051047,12051831..12051977
,12052825..12053425

Expression

GEO Profiles:Os01g0315800

Genome Context

<gbrowseImage1> name=NC_008394:12049523..12053574 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:12049523..12053574 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcggagctcacgtaccgcggcggcgcgggggccccgggctccgcctccgacggcggggagtactcccccaagccctccaagccgctctcctggctcacccgcgccgcccgctacgccgccgccgagcaccgccccgccttcgccctcgccgggatgctcctcgccgccgccctcttctccctctacgccccttcctccgacgcctcatcctccgccgccaccaccaccaccaccaccttcagccacctctcctcgctcccgtcgtcgtcggcggcgtcgctgcacgagtccgccggggggaaggtgccgctgggcctccgccgccgcgcgctgcgggtgctcgtcacgggcggcgccgggttcgtcgggagccacctcgtggaccgcctggtggagcgcggcgacagcgtgatcgtcgtcgacaacttcttcacggggcgcaaggacaacgtggcgcaccacctcgccaacccgcgattcgaggtgatccgccacgacgtcgtcgagcccatcctgctcgaggtcgaccagatctaccacctcgcctgccccgctagccccgtgcactacaagtacaaccccatcaagaccatcaagaccaacgtggttgggacactgaacatgcttggattggccaagaggattggggcaaaatttctcctcaccagcaccagtgaggtatatggagatcccctccagcaccctcaggtggagacttactggggcaatgtcaaccccattggtgttagaagctgctatgatgagggcaagcgcacagctgaaacgttgaccatggattaccaccgtggtgccaaccttgaggtgaggattgctcggatttttaacacatatggtcctcgcatgtgcattgatgatggccgtgttgtcagcaactttgttgctcaggcactgaggaaggaacctttgactgtctatggtgatggcaagcagactaggagctttcaatatgtctctgatttggtggaagggttgatgagcttgatggaaggggagcacataggaccatttaacctgggtaatccgggtgagttcaccatgctggagctggctaaggttgtccaggacaccattgatccgaatgctcgcattgagttccgtccgaacactgcggatgatccacacaagcgcaagcctgacatcacccgtgcgaaagagctcctgggctgggagcccaaggttcccctgcgtgagggccttcccctcatggttaccgacttccgcaaacgcatctttggcgaccaggaagcctaa</cdnaseq>

Protein Sequence

<aaseq>MASELTYRGGAGAPGSASDGGEYSPKPSKPLSWLTRAARYAAAE HRPAFALAGMLLAAALFSLYAPSSDASSSAATTTTTTFSHLSSLPSSSAASLHESAGG KVPLGLRRRALRVLVTGGAGFVGSHLVDRLVERGDSVIVVDNFFTGRKDNVAHHLANP RFEVIRHDVVEPILLEVDQIYHLACPASPVHYKYNPIKTIKTNVVGTLNMLGLAKRIG AKFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANLE VRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLM SLMEGEHIGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRPNTADDPHKRKPDITRA KELLGWEPKVPLREGLPLMVTDFRKRIFGDQEA</aaseq>

Gene Sequence

<dnaseqindica>3370..3660#2887..2961#2702..2785#2528..2607#1598..1744#150..750#gcgataaacctcgccgacggcgcggagagaaatctgactctccaacctcccgtccttggtccttacacgcaattataggggcgtgggtcccacgtctcagtgagagagagagaagctttttttttctacatctgagacgttcgccggagatggcgtcggagctcacgtaccgcggcggcgcgggggccccgggctccgcctccgacggcggggagtactcccccaagccctccaagccgctctcctggctcacccgcgccgcccgctacgccgccgccgagcaccgccccgccttcgccctcgccgggatgctcctcgccgccgccctcttctccctctacgccccttcctccgacgcctcatcctccgccgccaccaccaccaccaccaccttcagccacctctcctcgctcccgtcgtcgtcggcggcgtcgctgcacgagtccgccggggggaaggtgccgctgggcctccgccgccgcgcgctgcgggtgctcgtcacgggcggcgccgggttcgtcgggagccacctcgtggaccgcctggtggagcgcggcgacagcgtgatcgtcgtcgacaacttcttcacggggcgcaaggacaacgtggcgcaccacctcgccaacccgcgattcgaggtgatccgccacgacgtcgtcgagcccatcctgctcgaggtcgaccagatctaccacctcgcctgccccgctagccccgtgcactacaagtacaaccccatcaagaccatcatatccttgctcatcaattactctttctcgatgctcatctaagttttggtgctaactgatagctgggttgtttaatttactttcccatttctagttaaattttgtcgattttaggtgaatttgctggattcggttagttttggatggggaaattccttcttttaagcatatatattcaactgcttgatttaggtagatggacgttataaaaaatctagatatactcatagcatgacatatccgtgttagtaagaatttagtaagaaaaagttagtacgtatagccttttccgataacaaatagagtgtgaatagatttcagctgtaattctggagctgaggtgttcatcttgattgtctggtcaacctttctcatttatttttggccaaattcattgcatactttatactccatctgaacatgaagtcagggcttgctttctgatacataaactggcatatctggattgctctaattaaagatctttggatctggcgttctgcaacccgcatctctagttgctttaaacttcatgaactgatggaaacgaagtttgcttaatgttgttttaactccaaaaaggattgaatatcaaaattatgctttctatttattttttgtggtaagtaactgtgaaaaaaaaacgatttttagtggaagaaaccaagtcaagattgcatacagttttttccaacaactagatctagtttagtggatttcgtgccgatttgttaatcggaatgtctgtcccgaaaggtcaaacaagcaagtgttttgatttgttgatgagcggtttcttttagtttctacaaatggttactgtgagccttaacatttgagatgacacaagaccaacgtggttgggacactgaacatgcttggattggccaagaggattggggcaaaatttctcctcaccagcaccagtgaggtatatggagatcccctccagcaccctcaggtggagacttactggggcaatgtcaaccccattggtaataattctctgccaatattttgtttgccatattatttaatgtctcagcatttaactgacaaattaacttaatagttacctttcatgtttggactgagttgtttgttggataacagataagagtatgggaacacctatgctgtcaatactccgtattaatttcttataattttactgtaggacagaaaccaacaaaattatgtttatttgttctagaaattttttctaagaatcaaaatactgacagaaaaataagctattattggattaccctgtgatttgaaaaggctatagtactatggagccactgctaatatgaaccgttgagaatatagatgtttgttttttttttttttaaaggagggctactggctggaattccaaatgctggggattgtggctgggctgtcctaatttttagggcacccatgctttgaatctttcgtttagaagattacacttttgcttggtagaagtagctccgagagggtcagccacttgttggatacctcgctaacaagggaagagtaggataaaaactacaccaagtcagcatagttttttccaaaatagtgacagcaatagagcattagagaagaatcaaacaacagtagagaaaggagtattttcttcaacttgacatttgacagcaacactgcaacagctaaccctttccaaaaagcagtccttatattttggcatatactgtgtggtttcatttaagcaatgttttgcttgttccacaagagatttttaatgaaaattatttattcgataataggtgttagaagctgctatgatgagggcaagcgcacagctgaaacgttgaccatggattaccaccgtggtgccaaccttgaggtttatgctgtttaggttatttgtgatggatagcattcaggctactttcttcttttggaaattatgttaatttatgatattgtgttgtatttaggtgaggattgctcggatttttaacacatatggtcctcgcatgtgcattgatgatggccgtgttgtcagcaactttgttgctcaggtagccgtcacttgcatcttcctcttttggctcccgaatttacagatggtttgattgttcctttgatactgacatcttgtttctgcaattatggttttcaggcactgaggaaggaacctttgactgtctatggtgatggcaagcagactaggagctttcaatatgtctctgatttggtgggtatatctataacatgatgagacacctgaacaatatcaatgacctgatatctgcctgttaccttatttgcatacattccctgagcatataattgtgttttgttgtctcatacatgaaagtagcatcaccgaaatgactaatatacttgatgtcctctgcataatactctgagtacacatttatgatctgctgaagagcagaatgttgacttcttgcagtatatatttaggtatccagtaactttgattgacggtgagggtttatggtgattagatcatctcacatctttttttgtttatatacaaggagcaatcccctctttaattataaaccaatatttagatctgccatctaattttattgataatgcgtgtatcaagctgctaatgtgatgattctttcaggtggaagggttgatgagcttgatggaaggggagcacataggaccatttaacctgggtaatccgggtgagttcaccatgctggagctggctaaggttgtccaggacaccattgatccgaatgctcgcattgagttccgtccgaacactgcggatgatccacacaagcgcaagcctgacatcacccgtgcgaaagagctcctgggctgggagcccaaggttcccctgcgtgagggccttcccctcatggttaccgacttccgcaaacgcatctttggcgaccaggaagcctaatctgcagcagctggtggcatgtattaaatttcaacatgacaacggcacacaactcattaaaatcctataacttgtactttatagtaactacatgtggagaagttaaatcgggtagaaatacttggaaaggaaattggtgccttggttctttggttgcttcatacctcacggacaaaatggccatggctgaatacatagctagttctttggacacatggggatgctactaatactatcaatctatcataggcactactgtaagctactgtcttttttggtcttgctcatagaagccatatggtgttatacatgtaatctttattggaaactcgatatatgtttcagtatgaacagaacattccacttgcttacatgaagcatctttttaaact</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0315800, RefSeq:Os01g0315800