Os01g0316900

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Revision as of 04:37, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0316900| Description = Conserved hypothetical protein| Version = NM_001049416.2 GI:297596651 GeneID:4327265| Length = 7566 bp| Definition ...")
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Gene Name

Os01g0316900

Description

Conserved hypothetical protein

Version

NM_001049416.2 GI:297596651 GeneID:4327265

Length

7566 bp

Definition

Oryza sativa Japonica Group Os01g0316900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:12116876..12124441

Sequence Coding Region

12117316..12117854,12120449..12120759,12120870..12120964

Expression

GEO Profiles:Os01g0316900

Genome Context

<gbrowseImage1> name=NC_008394:12116876..12124441 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:12116876..12124441 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgccggcgccggccgtggatgcggagggggagtgtggcggggggaagagccacaacaccctcaagcccgacggtgttcgtgtagctgcagcctctaccaccctggactcctcggatagccatggtccagccgctgatgttcagggcgggggtggctccggcgagaggttggactcctccgacggcgagggacgagccacggatgttcagggcaggagcagcgccggggagagcctggtggtgaaatccgagcacgcgtgcgcggcggatgaccccgtgggtgacggtgcccttctcgcccctgccaacaagcctactggcgcggaccctttggcggtagcatcctcctcgcatgacatcgatgcggcgagtgctgatcccgcaaacgacgaggaagacggggacaccacggaatgctcgagttcatttgggaactcttgctgcgagaccgatgatgaggctgaccatggtggttcggaagtggattctccattttcggagaatgctgatggtgttcaagcattgattcggcctagaaagaaaaaggtaactgctgagtggaggagtgctgtccgcccaatgatgtggagatgtcagtggttagagttgcgcatgaaggaccttttatctcaagtgtcgaagtatgaccgagagcttgctctaatcaacaaaggaaaagaattgcagcaggcagtaaacatgacaaatggttctaggtcagaatcagcacagtcttccaaaagccgtgaaaatagttgtatggagaggcgaaagaggagaagacttgaagaaactgtgaatacctcattgtacatcaagaagcacgagatattgtcatacttctttgataaacagaataagggtgctgaaacagatggcatcttaattgatgacgatagcagtggcccaggtatgtatatggtagtgtgtccacttgtatag</cdnaseq>

Protein Sequence

<aaseq>MAPAPAVDAEGECGGGKSHNTLKPDGVRVAAASTTLDSSDSHGP AADVQGGGGSGERLDSSDGEGRATDVQGRSSAGESLVVKSEHACAADDPVGDGALLAP ANKPTGADPLAVASSSHDIDAASADPANDEEDGDTTECSSSFGNSCCETDDEADHGGS EVDSPFSENADGVQALIRPRKKKVTAEWRSAVRPMMWRCQWLELRMKDLLSQVSKYDR ELALINKGKELQQAVNMTNGSRSESAQSSKSRENSCMERRKRRRLEETVNTSLYIKKH EILSYFFDKQNKGAETDGILIDDDSSGPGMYMVVCPLV</aaseq>

Gene Sequence

<dnaseqindica>441..979#3574..3884#3995..4089#gagcgccagggccatgccccaaatcgatctcgcctcgagctcgaggccctcgcgcccgcggattccagccgattgaatcccccccacccctaaccccgttctctcggtgctctgctcgttataagcgggtggcctttagccctaggttttttgttcgattgggattttatatatcccgcttggttgggggggggggggatcggatttttcgtttcggtgccgcgaggtttgcgaattctactcgcgtcgtgcgtccgattctgcgctgtttctgttcgtggattctgttgcggtttctctggcgtaatctctgtgttccttttcctctctgcaggtgccgggggggtttcctcgattctggcgcggttttgcttagaggaattccggatttcttagcggaattctgatttccgggctgttgcgaggtgcatctaccagccatggcgccggcgccggccgtggatgcggagggggagtgtggcggggggaagagccacaacaccctcaagcccgacggtgttcgtgtagctgcagcctctaccaccctggactcctcggatagccatggtccagccgctgatgttcagggcgggggtggctccggcgagaggttggactcctccgacggcgagggacgagccacggatgttcagggcaggagcagcgccggggagagcctggtggtgaaatccgagcacgcgtgcgcggcggatgaccccgtgggtgacggtgcccttctcgcccctgccaacaagcctactggcgcggaccctttggcggtagcatcctcctcgcatgacatcgatgcggcgagtgctgatcccgcaaacgacgaggaagacggggacaccacggaatgctcgagttcatttgggaactcttgctgcgagaccgatgatgaggctgaccatggtggttcggaagtggattctccattttcggagaatgctgatggtgttcaagcattgattcggcctaggtgagcttgtttattgattccaatgccttgtatgcactaaatgatagattgattttattgttgttggaggaaattaacaagtataagacggcaactggagactaatttactactcagttaggtttcccgcgcttttggggatcttaaaaaggaaggttgtattaaagtttcaactgccaaaccatatcgtaactaggattcgtatatctaaaagttgtatgactagagcatataaagttcgataatattagatgtcttcgtatatcatgtccaagtgaaacttcagatgttatttatttactaacaaggtgccctgttcacttgtacagttagtctcattctcaatatttgtttcagctgcatatgttttttatttgttggccatatattttatctattgtgtatggatggatataagtgtgtcagatttagtcttgttggtcttacagatgtagtttatgcaaaaatgtggtagtacctatttcctcgaatggcgcttatgtgaaagtataacagtaataatagcagactctgaatacagtgaacattgggaccttttaaattactgtcagacttctctcacactatgttaaagaatataaataattgtgagtaatgaaaattgatggaaattactcaaattggaatatggagcagtcataaccagtgaaccaattaagggctcaattagaacacgagaaattaaagcttaagaatagaagaaaacacaagaataggaaatgaatacaatgcagaacataggattggggaatccatgaatttcattggaacatagatgtttagattggtgacaattaaaaacaggaatatttagaagtgaacttgtgtaattgcatacatacagaaaaaataaagaaagagtgaattgcactttggactatattttattacctaaatttcatgttggactaggctttaacactccttttcacattggactatgttttgttgccaagcttttgtactttgggctgctcttcttcctaagtcttcctgagcaaacatggcacactggctaactcctcgcctctcctcccacatattgttagcttcagcgctagcggcatcggggtgggtaccagatggaggctttggaactagtcttgccgagggataaccataacctttatccatgcccatacccttggtaaacaggtagtgtatgggtaaaatttgctttacccattagaaatgggttgggtctggatatacccatttataatagggtgggggggggggggggtggggtgcccgtatacctgtttgaccaatcttatctttctctccggttgcttcttccccaaatcctgagagaagctgacaccatggcgtatccctcttcctcgatgaacaccttgcgggagtgcaggacgtgtcagctcaccagtctcgtgcagctgccggacctctttggcgacgctgacgaggtgatccctgacgaggagcagcaggagggagaagacacagccccgtgtggcgagcaacgattggttctcctgccggagcgaagtgtccatgcgctcgtccacggccttgcggaacctgtgcagcacggtgcacgccgcagagtgatgtcgtgtacattcccattccgttcttctgctgctgccagctgtgtggctcctcctggatcctcctcaggtttgggtggtgccttggcggcacggtggtgaatggccagatacgttggcttcttggagaacggcctgacaaaaccatggccaaattcatcatctctgcattttccaagatcttggctccattgttgctagttctttgctttgcttcctggttagatcgttctacccaattacccaaatacccactgtatatgggtaatttgattaatggggaaattggggagggtaagattggggattctgttttatgggtatgcggaattggggatgggtatggccgggtaatactcatataccctccccattggcaggtctaatcagaacagggtcggcgctgagcctgggcagctacttgatgtctacagatatcctccgaactgacaactcatggatgcatagagctagcatggccaggaacatgaaccagcagccagtttgttcattgcgtaccttgatggctcgatctcaaagatcatagccatccttcttgctttgtcacattcatatgcataccttcttgctagcatttgtcacatattcatatgccatgcttctgttttgcgcatgtaacataagttcctcgtgcaacctgaagacatatcatgccatgttgatctttgtcatatattcatacatttttcttcaaatttgtgtatgtaacacaatcaaaattcatacattttgctttaaatttgtgtatgtaacataagttactcccacaatctaaatgcattatatgtgttagctttgctataaatacacacgttttcattttttttaaaaaagaacattatacttccaagtcgtgaatgtaacatacatatcagtataccagagttgagtcccactgtaacttcatatgaaaaaaattctattaattttaatatgctttcatattgtgtcagtgtttaacatgtacaaactatctttcagaaagaaaaaggtaactgctgagtggaggagtgctgtccgcccaatgatgtggagatgtcagtggttagagttgcgcatgaaggaccttttatctcaagtgtcgaagtatgaccgagagcttgctctaatcaacaaaggaaaagaattgcagcaggcagtaaacatgacaaatggttctaggtcagaatcagcacagtcttccaaaagccgtgaaaatagttgtatggagaggcgaaagaggagaagacttgaagaaactgtgaatacctcattgtacatcaagaagcacgagatattgtcatacttctttggtagggcattcatttcatttttctaggaataggataacagtttcttgcattgtctaatcttgcaccaggttcctatttgttggtaatgaagttcttgcattctttaacagataaacagaataagggtgctgaaacagatggcatcttaattgatgacgatagcagtggcccaggtatgtatatggtagtgtgtccacttgtatagttgtgctggagtttacacaggaagcattgtagttagcaaaaatttgcattaaaccaatctgcaatttacctaattatgtgtgtcacatttctagtggttaattgataatagagtctttaggagcttaaggactgttaaatctatcattagctaagtgcttgcgtgtcgcaagttctcccctacacttcacaggttcctctcccgattgagctgcttgttttcatctcctctttgttgtattaatggatggtatggccttgaatgtgtaagaacttatcaaccaaatggagatgaaaaatgtaaaacattttgctgcatttttaatttctaaatacttaaaaacacaacattgaaatagaccatagcaacactgtactgatgatcaggtacaatgcactaataactaggtgttgaatgattcatctgcgcagcctatagtaatcagaatggcatgtgtgtcctcgccacgattgccagcacagttgaccaggacccagcctggtgtccaccaatgcgtgttgacgtccttgcctagaaaccgtgcgggcaacccacgccctatcgcccaatcattcattgcctgtccgcatgctatgctttaagtctttcccaggtcccaattgagatcactcccatttcctgactatccattacccaggtaatcaacagaacaatgcaactctagcccaaattaggtggtaaacataaggtagaagtttgatgacccacccaacttctaagcctgaccagttaatctaagaccaaggcagcccagtgtggcatcttattcttcccagtcccagctgccagccatgtctaagaccaagcgtacttgctgccccttgccagttatttgaattagcttgctagtgtctatggactgggtacctggggagttccaatttaggtggggctggaacgcccacaagccccaatggtaagttcacagtcacggagaaaagcttggctataaatgacaccttgctggtatccttggtaaaatgtatgtgtcttgttaatgattaaaagtagtatacatctcattgtcagtgtgttacccacatctttccttaccgcgatgtaaacattttggtatcttcgtacttttatttttagtgttatccattataattttggattgaactaatgaagggcagcatacttgagctattcagacattggttatgttggcattgcaaaatgaaatctatcttcattacctaatgtctgaattttacatgatttctcattgccaacgctaactctttatacgatcgattcctacagttggcaatgatgttaaaggtgggatccatactgttgggttgcttgagcccaaggaatatgatatggttgcggagcaactcacactgcagaaatttcttttgacaattgatggtattcggtcccaagttcttcggctacaagatcgtctcagtaaggttcgttcaaaacaagaaaacatggtttccttggtggaccatgcccatatcaaggtgtctgagaagaggctaaggactcaaaaacggtcattctcatataagaaagatagatatagtaaatcaaagaaaaagaagaatctaaacattttatcgaaggaagaggataaaccagctcatgcagtaatatctactttgtctaagagggcaccagattgccaaacagaagttacaatgtacagtagcgaagaaaaaagtggagagaggtgccagtcacataagaaagccatcactgtggatttactccttccaaatggtcatatgggagatttgtgcaaagtaagtccttgatcctttccttatgatgtttttatttgattacttaacttccatacaaatgttttgactagactgaacgaatgttcaattgacaatattggggatgacaatcctcaattttcccattaacagtagagagaatagcacttctttttttgcatttattaaaatagtgtggatttcttggatcgaattccaataaataatgcgtgtcaaaaagtgttattctccagtggaacaagaattggagttaggtgtgcatgtgggccactcacggatacaattatagttgattattggttctacgttctgcatatggttcttacgttagtggtaaagtagggttattgactttgttgttcccctcacccaacctagtggagtcgctgattgtaagtctaaaaacatgggattgggacccatgtcagatgtgcagcatggtaatgcatgacatgagttgccttggactagtgcagtatttgttactccctccgtcccaaaatctagcaatctgtccagattcgtagtattaggtggtgtctaatcgtgtactaggttgctatattttggaatggagggagtaggattcttgcagaattgaaggaaatcagttcgatgtgctaaaggaattcactctttggttacgctatgcagttctagtatgttgtatttctttggaacaatggaattccagtgcccagatagttttgattatctcatattctttatttcttcatcctacaactgtttgtgatcaagaattatttggttgggctgtcaagtttttcaatgttagcttactcttcacaggacaatgatgacgtcctcatagacaatcaagcagccaatgaaggataccagccatttgagaacgccaagcagccgatggataaatcattagaactaacagagaaggtctgtgaaactgctaatttgagagttggaagtaactcttcccctgttgaagtcacaagcacttcagctccattcagagttgagaacgcttctgtttccctggaagccaggagtacgcctggtcaagtggtgaagcaagaaccggtttttgaaaaaccaccagctttgaagcatgtctactctggaaagaggaggcgaaaacttaaaatgaaggagggtagtggtcctgtatctggattgacccagagtaaagaggcctctaaaacacctgctacaaagaagaaaactgagagcacatccccagctgcaaaaaagctgaaaattgaggagaccacagccccagatgaagggaagaaagctgtgaagactcactcaactggaaagaagcgaaaagctggaaagtcatgctcatctaccaagaatcaggaagctgagaattcatcctgtgctgcaaggaaggatataagcgaaagcaccccctccaaaccgaggattgaaaaggcagtcttggtggcggtgaatagccggagaagtcagagggtccggaagccgaaaatttactgaaacaaagcagtctctccaatttcaggattgtgtatgtatcacagacgcgtctttttatgttttccgtgctgctgaaatttatttctatacgttattatgtgctcgccatgtaagttagtgtatatatcagcttgtctagataaagagggttcgtaatggtttagccatacctttttcttttgggctgccagactaaatagtacagttatcttgtgctgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0316900, RefSeq:Os01g0316900