Os01g0319200

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Revision as of 04:37, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0319200| Description = Protein of unknown function DUF247, plant family protein| Version = NM_001049422.1 GI:115436257 GeneID:4327274| Leng...")
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Gene Name

Os01g0319200

Description

Protein of unknown function DUF247, plant family protein

Version

NM_001049422.1 GI:115436257 GeneID:4327274

Length

3483 bp

Definition

Oryza sativa Japonica Group Os01g0319200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:12272375..12275857

Sequence Coding Region

12272375..12273754,12275750..12275857

Expression

GEO Profiles:Os01g0319200

Genome Context

<gbrowseImage1> name=NC_008394:12272375..12275857 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:12272375..12275857 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaggaaacaaatctgacaacggtggtgctcgggagctccaagagaaaggtggcaacgacagtgccccgtgcgaatgaaggcagctacgtggaggaggccgatccgaggagattgacgacgacgacgacgacgaagacggacacggtgcgtgtgaacatcgagaagatgctggagcagctgagccggccggcgaggctggacggctactccatctaccgtgtcccggctagcgtccgcgacagcgtggacaacaagcactacgagccgaggctggtctccatcggcccgtaccaccggagcaagcaccacctccgcgccatggaggaccggaagcgcctctacctcctccggttcctccacgaccagcacgacgacgacgacggcagcggccgccgcgacggcctgctgcaggactgcgtcggcagggtgcgcaagctcgaggcgcgagcgcgcgcgtgctacttcgagagcccggccaccggtgacggagaagacgacgacgacatgttcgtcgagatgctcctcctcgacggctgcttcgtggtccagctcttcatccagtggttctgcggcgccacggatcccgtgttcgacgtcggctggaacctcccgctgctgcacaccgacctgctcatgctcgagaaccagatcccctacttcgtcctcctcgcgctctacgacgcctactctcacgaccccaaccgcccgccgtcggcgcgccccaagccgtcgctgacgaccatcatcacctcctacttcagcgagaaggaagggagacagcccgcgacgacgacggccaccgaggacgccatcgatcacctgctccacctgtaccactccaccttcgtgatgccgccacccgatcacctgccggcgccggtgcaggctgactgcggcggcaagctgccaaggacgatccgctgcgccaaggagctgaccatgcacggggtgaagttcgtgcgcaagccggagacgaccaacgtcctcgacgtcacgttctgcagggacaccggcgtcttccagatccctcgcgtcgccatcgaggactccacctgcatcaggtacatgaacctcgtcgccttcgagcagtgccgcggcgaggcggcggtggcggagaagcacctgaccagctacgtggtgctcatggactacctgatcaacacggcggaggacgtggtgatcctggacagggcggacgtgatggagaacaagctggccaacgaggaggaggccgccaagttcttcaaccagctccgcctcagctcctacatcaactacgacgaccactacctggcgccggtgtaccgcgacgttgacgccttctgccgccgcaagtggccaaaatacaaggccaaattccgccgggactacctcaacagcccgtgggcgattttcggtttctgcttggccaccacattcgccgtcatcaccttgttcaacaccatcgtcaccatattgcagacgtttttccatctctttaaatga</cdnaseq>

Protein Sequence

<aaseq>MKETNLTTVVLGSSKRKVATTVPRANEGSYVEEADPRRLTTTTT TKTDTVRVNIEKMLEQLSRPARLDGYSIYRVPASVRDSVDNKHYEPRLVSIGPYHRSK HHLRAMEDRKRLYLLRFLHDQHDDDDGSGRRDGLLQDCVGRVRKLEARARACYFESPA TGDGEDDDDMFVEMLLLDGCFVVQLFIQWFCGATDPVFDVGWNLPLLHTDLLMLENQI PYFVLLALYDAYSHDPNRPPSARPKPSLTTIITSYFSEKEGRQPATTTATEDAIDHLL HLYHSTFVMPPPDHLPAPVQADCGGKLPRTIRCAKELTMHGVKFVRKPETTNVLDVTF CRDTGVFQIPRVAIEDSTCIRYMNLVAFEQCRGEAAVAEKHLTSYVVLMDYLINTAED VVILDRADVMENKLANEEEAAKFFNQLRLSSYINYDDHYLAPVYRDVDAFCRRKWPKY KAKFRRDYLNSPWAIFGFCLATTFAVITLFNTIVTILQTFFHLFK</aaseq>

Gene Sequence

<dnaseqindica>2104..3483#1..108#atgaaggaaacaaatctgacaacggtggtgctcgggagctccaagagaaaggtggcaacgacagtgccccgtgcgaatgaaggcagctacgtggaggaggccgatccggtggggtagcggctcacgagctcctccaaatccatgaccgcaaccgtgagggggcatccacttctcgtgacggtagagcaagggacaccagattatgtgacagcggtggaaggggctgtcctatagctctagatctaggattggatggttgctcgggtgctagcttatatgacagtggcgatgatgtctcagggcagagagcaggtctggcaaggagctcatggtgaaaataggggcgatgacggctggtcttttttttgtgatttccaattggttttgtgcccaaagaaggttttcagaggaggacctcctagcctaccgagtgagaaaatcatttttcagaggtgggtgtggaacagcctgcaaacattgtccatttacccacctatgaaaactcatttggatcactgcattcctaatttcgtagtagtggcattataagtttaattatcagcctggattcgttaattagtatttatttcgtaagccatatggatatatagaggtggtaaagttgatctatattatgtacggttagttaatggcatggcaaaagagagagaaaaaaaatatgcataagatattccactttttgtacaagcatttgtatattgtggtatcagacaaacagatcatgctagctagtatgtagttttaagaacctctttttgaatatactcatatcaaagagttgtacctggcaacatatttataggtatagggatcgctagctggtactaagttatacgtgatattataataaaaaaagaagggatacaagaatttttatacaggtttggcccctttgcttacgggtagtcctactactattggctgaagccggtgttgtcattatatatcaatatctcacgagtacaatattgaggataacataatataggctctatcagcctaactaacggcgtaaagctctcatatatggtcaatggctagtgatagtccacttcctcaaataagaattcgacgatattggaggtagctatagttccctcttgtcagtatttatgactccgtattagacttgtctaggcttgtcttcacttatgttggtatatgtggtctatctttgggttgtcctctctcctcctggaggtattgtatttattccctcgagtatttatttgtccaaatagaactaaggaaataggtatggatacgatctgagttgatcttgtagtgtcttagtagctagtactctatctcactttgtttattcagaacacttcccatatgtggttttattccgtataaatcttagtatattgtggatctcactgagtctaatacacaagcatgagatatcccatattcaggatacagacaactaccattctaccaatcaataatttgtgatcccaaaacaacaactacaaagtagtagtacaaaacagtaatatgccatactatttgttcttccaagtacatttatataatatccattttaaatttatagcgattcaaaaatctaaatgtatagtttgggagaaatttaatggtcagcgttactcttaattaagatactccctatataaatgaacaagatgaatacacaatccgtaaaataatcatctgttcagtacgtatgcggaagatcgagcagtgtgatcttttaacttgcaagctgctacttacaccgcgggagttgcgagctgtgcagaagatcggctatatctagttgctagcttgctaatgttgccatctgctttctttggtgtcctcactcgatctggtgaatacgcagtagctgagagatagtgacagtacgtaccggccggccggtggatcgaccagtggaaaattaacaatggtaaaattcttgcaataagctagttgtttaattcctccttgatcattaattttgccccccctggatcgttttgattaatgttgctatcagatggattgatgcgaacgattgatatggttgtactaattggtgtcatcctgttcattgtggtacggtgatctgatcagaggagattgacgacgacgacgacgacgaagacggacacggtgcgtgtgaacatcgagaagatgctggagcagctgagccggccggcgaggctggacggctactccatctaccgtgtcccggctagcgtccgcgacagcgtggacaacaagcactacgagccgaggctggtctccatcggcccgtaccaccggagcaagcaccacctccgcgccatggaggaccggaagcgcctctacctcctccggttcctccacgaccagcacgacgacgacgacggcagcggccgccgcgacggcctgctgcaggactgcgtcggcagggtgcgcaagctcgaggcgcgagcgcgcgcgtgctacttcgagagcccggccaccggtgacggagaagacgacgacgacatgttcgtcgagatgctcctcctcgacggctgcttcgtggtccagctcttcatccagtggttctgcggcgccacggatcccgtgttcgacgtcggctggaacctcccgctgctgcacaccgacctgctcatgctcgagaaccagatcccctacttcgtcctcctcgcgctctacgacgcctactctcacgaccccaaccgcccgccgtcggcgcgccccaagccgtcgctgacgaccatcatcacctcctacttcagcgagaaggaagggagacagcccgcgacgacgacggccaccgaggacgccatcgatcacctgctccacctgtaccactccaccttcgtgatgccgccacccgatcacctgccggcgccggtgcaggctgactgcggcggcaagctgccaaggacgatccgctgcgccaaggagctgaccatgcacggggtgaagttcgtgcgcaagccggagacgaccaacgtcctcgacgtcacgttctgcagggacaccggcgtcttccagatccctcgcgtcgccatcgaggactccacctgcatcaggtacatgaacctcgtcgccttcgagcagtgccgcggcgaggcggcggtggcggagaagcacctgaccagctacgtggtgctcatggactacctgatcaacacggcggaggacgtggtgatcctggacagggcggacgtgatggagaacaagctggccaacgaggaggaggccgccaagttcttcaaccagctccgcctcagctcctacatcaactacgacgaccactacctggcgccggtgtaccgcgacgttgacgccttctgccgccgcaagtggccaaaatacaaggccaaattccgccgggactacctcaacagcccgtgggcgattttcggtttctgcttggccaccacattcgccgtcatcaccttgttcaacaccatcgtcaccatattgcagacgtttttccatctctttaaatga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0319200, RefSeq:Os01g0319200