Os01g0319400

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Revision as of 04:37, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0319400| Description = Protein of unknown function DUF247, plant family protein| Version = NM_001049423.1 GI:115436259 GeneID:4327275| Leng...")
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Gene Name

Os01g0319400

Description

Protein of unknown function DUF247, plant family protein

Version

NM_001049423.1 GI:115436259 GeneID:4327275

Length

4309 bp

Definition

Oryza sativa Japonica Group Os01g0319400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:12300118..12304426

Sequence Coding Region

12300294..12301631

Expression

GEO Profiles:Os01g0319400

Genome Context

<gbrowseImage1> name=NC_008394:12300118..12304426 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:12300118..12304426 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctggagcatctgaccacgccggcggcgaggctgggcgacggctactccatctaccgtgtcccggcgaacgtcgacaggaagcactacgagccgaggctggtctccgtcggcccgtaccaccggagcaagcaccacctcagcgccatggaggaccggaagcgcctctacctcctccggttcctcgacgacggtggcgagagcggccaccgccgcggacttctgctccaggactgcatcgacagggtgcgcgagctcgagccgcgggcgcgcgcgtgctacttcgagagcccggccaccggtgacgacggggaagacgacgacggcgacatgttcgtcgaaatgctcctcctcgacggctgcttcgtggtccagttcttcatccagtggttctccggcgtcgccgaccccatcttcaacgtcggctggaacctcccgctgctgcacaccgacctgctcatgctcgagaaccagatcccctacttcatcctcctcgcgctctacgacgcctacacgcatgacggcgacggcgacctcgaccggccggcgcggcggcccaagccgtcgctgacgagcatcatcaccgcctacttcagccagaaggaaggtcggcagccggcggcgacggagacggcgcagctgcaggaggaggacgacatcgaccacctcctccacctctaccactccaccttcgtcaagccacccgatcacctgccggcgcggcggcaccgccacggcggcggcggcagcagaccgccgaggacgatccgctgcgccaaggagctggccatgcacggggtgaggttcgtgcccaaggtcgggacgagcaacatcctcgacgtcgcgttccacgacggcgtgttcgagatcccgcgcgtcgccgtcgacgactccacctgcacccgcttcatgaacctcgccgcctttgagcagtgccgcggcggcgacgccgagacaccggcggcggggaagcacctgaccagctacgtggtgctgatggactacctgatcaacacggcggaggacgtggtgatcctggagcgcgccgacgtgatggagaacaatctggcgaacgaggaggcggcggcggcgttcttcaaccagctccgcgtctgctcctacatcgactacgacgaccactacctggcgccggtgtaccgcgacgtcgacgccttctgccgccgcaagtggcccaagtacaaggccaaattccgccgggactacctcaacagcccgtgggcgatcgtcggcttctgcttcgccaccaccttcgccgtcgtcaccttcttcaacaccatcgtcaacatactcaagacgttcttccatgtcttgcattga</cdnaseq>

Protein Sequence

<aaseq>MLEHLTTPAARLGDGYSIYRVPANVDRKHYEPRLVSVGPYHRSK HHLSAMEDRKRLYLLRFLDDGGESGHRRGLLLQDCIDRVRELEPRARACYFESPATGD DGEDDDGDMFVEMLLLDGCFVVQFFIQWFSGVADPIFNVGWNLPLLHTDLLMLENQIP YFILLALYDAYTHDGDGDLDRPARRPKPSLTSIITAYFSQKEGRQPAATETAQLQEED DIDHLLHLYHSTFVKPPDHLPARRHRHGGGGSRPPRTIRCAKELAMHGVRFVPKVGTS NILDVAFHDGVFEIPRVAVDDSTCTRFMNLAAFEQCRGGDAETPAAGKHLTSYVVLMD YLINTAEDVVILERADVMENNLANEEAAAAFFNQLRVCSYIDYDDHYLAPVYRDVDAF CRRKWPKYKAKFRRDYLNSPWAIVGFCFATTFAVVTFFNTIVNILKTFFHVLH</aaseq>

Gene Sequence

<dnaseqindica>2796..4133#atacttcttcttcctcgccgatgagatccctcccccaagctagcacgcacgcaaactaggcctttctaccacatctctccaacagttacagccccatggatccatagccagttagccacgacccatatattgtgtcttcctaaaggagttctcatccgacctgtggtatcgcagaaacctcatctccaccttccatcgccatagccagagtcgccggaggagttggagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaaggtaaaccccttctaaacgcaaatcctatatgtagttatctttattgagttagcacttagcacatccctataacgttttacaaatctctaagtcgaaatattgtaaacaattattacacaggtgcgaactgttggatcgatatatataatttaatctttatttaatcaattagttgttgcagtgtgatgtatataatacatatatgggcaatataatacatctgagtctcacacgtatagttagaatttatagttagatgagatcgttcttgcattgatttgcatggtgtgcgtggcatgcttggagccatttggatgggcagctgctggaacgagtctagcgcatttgtattattatacattttattattattttgcaagctgcttgcagatccatgcatttgcacgcagaacgctaactgtgagttagtggcgtgagaataggtcgtgcatgagtgtagttgtatggcgcgagtgcaggcaggcacggagatatcgttgattgttgattgtgtataaataccgaacagatcgagatgggagaaaatgggtgcccgcccgggcaagaatgcgataggcagagattgtttggttgatgccctaaacaaggcgcctgagaaaaatgctaagccaaggaaaacttatggtgtggtacttgtctactctctccgtattttaaatgtatgacaccgttgactttttgaccaacatttaatcattcgttttatttaaaaattttgtacaaatataaaaatatttatgtcatgtttaaagaacatttaacgatgaatcaaatcataataaaataaatgataattacataaatcttttaaataagacgaatggtcaaacgttgaataaaaaatcaacggtgtcatacattaaaatatggaggtactatgttgtttgggtagtgactttgaccttagaaattaaatcacctgaaagcaaacaaagaaagaataaagtattctgaacacaaacagagcttcagtactccaggcaatttgtttccaggacaacaaccaagcccttgtttagttccaaaatttttctttaaactttcaatttttctatcacatcaaaactttcctacaaacacaaacttccagctttttcttcacatcattccaatttcaaccaaacttccaattttagcgtcaactaaacacaccccaaataggcttgtagtcctgtctccttttttctccttaatatagtaatcattcatttttagtatattatataatgtcattcacttttagatataattttaattatttatcttattattttttaaaagaatatatcaaagggccggattgtcaagttttcaggtggctgaagactaggattacaagaaaatatcacaatttcagttaaatttttgcaaggctaggattacattgagatttgatttgtgtgcaacaataacattatcctttctttccttccctttctctctccctcttattgggacaagacaccagatcgagtcgatcaagcaagactcctcgtgcactaccctcgggctcaccagctagctggaagccgtaaacggcgcgggcaggccaccgtcaaaccagcctcctcctctcttcctccctatgccagcagtggctccatttccccgcatcaccatcttcctcgtctttgatggctcgcgctgctggattcatcgcggccgaccgctacctcttaaccccacggcccctatgtccccacgccggtactgcccaccaccaacctccatcctcgcagctccaaaaatgcccccacagtcttaccgcctacctgtcacggccacgcaccaccaatttggctgctacccaagaccatcccactagggaaatttcccccctcttccccctccaacctcggcccctacccaaaaccctaagctttaacttcaccaccaccgccacaccattgctgccaccaccaccgcgaagttgccatctttggtgagttcattccctcctctctccctccctaagtccagtactaggatggaggtaactgaaagtcctagcaatttccgtcacctaaaagtaacaattccctatgtcaaaatataagttatatttaaaatacctttaactaaagatgtcacgatagttactaactttttcaataagacgaatggccatcatatatatttagaaataaagggagtagttttttctgtgcgcatgtatgttttggagaccgtttaagagagagctagtgactgtaatgcccagtggatcgatcagtggcaaaatgttcttactcaagctggttcttacaattttatccctctcagcctctctagataacctctaatgatatgctgtgatactgttgttcatattgatgtaagctattatatggattgattctaaatttccaatttctaatgatcgagtagttgttgtcagtttgtcacctgaggggtgatctgatcagaggagatcgacgacgacgacgacgacgacgacggcgaggcaggaggacacggtgcgcgtgaacatcgagacgatgctggagcatctgaccacgccggcggcgaggctgggcgacggctactccatctaccgtgtcccggcgaacgtcgacaggaagcactacgagccgaggctggtctccgtcggcccgtaccaccggagcaagcaccacctcagcgccatggaggaccggaagcgcctctacctcctccggttcctcgacgacggtggcgagagcggccaccgccgcggacttctgctccaggactgcatcgacagggtgcgcgagctcgagccgcgggcgcgcgcgtgctacttcgagagcccggccaccggtgacgacggggaagacgacgacggcgacatgttcgtcgaaatgctcctcctcgacggctgcttcgtggtccagttcttcatccagtggttctccggcgtcgccgaccccatcttcaacgtcggctggaacctcccgctgctgcacaccgacctgctcatgctcgagaaccagatcccctacttcatcctcctcgcgctctacgacgcctacacgcatgacggcgacggcgacctcgaccggccggcgcggcggcccaagccgtcgctgacgagcatcatcaccgcctacttcagccagaaggaaggtcggcagccggcggcgacggagacggcgcagctgcaggaggaggacgacatcgaccacctcctccacctctaccactccaccttcgtcaagccacccgatcacctgccggcgcggcggcaccgccacggcggcggcggcagcagaccgccgaggacgatccgctgcgccaaggagctggccatgcacggggtgaggttcgtgcccaaggtcgggacgagcaacatcctcgacgtcgcgttccacgacggcgtgttcgagatcccgcgcgtcgccgtcgacgactccacctgcacccgcttcatgaacctcgccgcctttgagcagtgccgcggcggcgacgccgagacaccggcggcggggaagcacctgaccagctacgtggtgctgatggactacctgatcaacacggcggaggacgtggtgatcctggagcgcgccgacgtgatggagaacaatctggcgaacgaggaggcggcggcggcgttcttcaaccagctccgcgtctgctcctacatcgactacgacgaccactacctggcgccggtgtaccgcgacgtcgacgccttctgccgccgcaagtggcccaagtacaaggccaaattccgccgggactacctcaacagcccgtgggcgatcgtcggcttctgcttcgccaccaccttcgccgtcgtcaccttcttcaacaccatcgtcaacatactcaagacgttcttccatgtcttgcattgatcatccaatgatcgatatgtgcagtgccttgctcactgcagagaattattatctttgttttaaatctatctatcgatctgttcttctaccgccataagtaaaaaaacataagacatgtattgaagacgttaatcatagacatgtctacatattgcttattggagacatctttgctg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0319400, RefSeq:Os01g0319400