Os01g0323100

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Revision as of 04:37, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0323100| Description = Similar to Pto kinase interactor 1| Version = NM_001049430.1 GI:115436273 GeneID:4326993| Length = 4431 bp| Definit...")
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Gene Name

Os01g0323100

Description

Similar to Pto kinase interactor 1

Version

NM_001049430.1 GI:115436273 GeneID:4326993

Length

4431 bp

Definition

Oryza sativa Japonica Group Os01g0323100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:12475454..12479884

Sequence Coding Region

12475790..12475942,12476406..12476492,12476590..12476722,12476837..12477110,12477368..12477494
,12477595..12477851,12478835..12478919

Expression

GEO Profiles:Os01g0323100

Genome Context

<gbrowseImage1> name=NC_008394:12475454..12479884 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:12475454..12479884 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggttgcttttcatgctgcggagcggatgatgtcggcaagaagaagaagcgcgacgatccttacgtcccgatccctgatccaggtggtaactatggacgtagcaagcccgggcccccagccccttcgcgttctccccccaccagcagaaatctgccaattgcagtaccggcaattccccttgatgaaataaagggaataaccaagaacttcagcagtgatgctctcatcggagaaggctcgtacgccagagttttctttggtgtgctgagagatggcaggagatctgcggtgaagaagctcgactccagcaaacagcctgatcaagaattccttgtgcaggtttcagccgtttcacgactgaagcatgagaatattatccaacttatcggatattgcgctggagggagcatccgtgttcttgcttatgagtatgcaccgaggggctccttgcatgacattctccatggtaaaaagggtgtgaagggagctcagccaggaccagctctatcatggatgcagcgagtgaagattgccttgagtgctgcaaaggggcttgagttcctgcacgagaaggcggagcctcgtgtcgtccaccgtgacatcaaatccagcaacattatgctctttgacaacgatgttgcgaaagtaggagacttcgatgtatccaatcagtccccggacatggcggctcgcctccactccactcgtgttcttggcaccttcggttatcatgctcctgagtacgcgatgacagggcagcttagcacgaagagcgatgtctatagcttcggagtcgtgttgctggagcttttaactggtcgcaaaccggtcgatcatacgctgccccgtggccagcagagtcttgtgacatgggctactccaaggctaagtgaagacaaggtgaagcaatgcgtggatccaaggcttgaaggggattatcctcccaaggctgttgccaagatggctgccgtagctgcgctgtgcgtgcagtacgaggcggacttcaggcccaacatgagcatcgtcgtcaaggctctgaacccactcctcaacagccgcccgaacaatcgccccgcctccttcaccgacgccggcgagcgatccggattatga</cdnaseq>

Protein Sequence

<aaseq>MGCFSCCGADDVGKKKKRDDPYVPIPDPGGNYGRSKPGPPAPSR SPPTSRNLPIAVPAIPLDEIKGITKNFSSDALIGEGSYARVFFGVLRDGRRSAVKKLD SSKQPDQEFLVQVSAVSRLKHENIIQLIGYCAGGSIRVLAYEYAPRGSLHDILHGKKG VKGAQPGPALSWMQRVKIALSAAKGLEFLHEKAEPRVVHRDIKSSNIMLFDNDVAKVG DFDVSNQSPDMAARLHSTRVLGTFGYHAPEYAMTGQLSTKSDVYSFGVVLLELLTGRK PVDHTLPRGQQSLVTWATPRLSEDKVKQCVDPRLEGDYPPKAVAKMAAVAALCVQYEA DFRPNMSIVVKALNPLLNSRPNNRPASFTDAGERSGL</aaseq>

Gene Sequence

<dnaseqindica>3943..4095#3393..3479#3163..3295#2775..3048#2391..2517#2034..2290#966..1050#gagcgtaggttcttcccatttggcggttggcagcggaaggaaaggagagaaaagagggggggaaggccaggccaaccggagcgaaggaaagccagggagtaataaatcgagagagaaacggccaaaaaagaaaccaacaacaagaaagaaatcaagcaagcaagaagagacgagacgagggagagaaggagaagagggggccggccgcgggcgtcgtcgtgttcctccccccctctctctcctctcctctcctctcgatctccatccttccttccatccattcctccccgcacccttcgcattgctctcgtcgtctcgattcggtcgaggatctccaggaaaagaggtattactactgcttctcccttcttcttctttgattctttgattctactgttgttgttgttctttggttctttgattttgccgttgtttttgttgtgttattttggttcttgatcagttgatcgtctttttttccttttcttttaatctttgtggggttgtaagatttgttgtatattgttttgattttgttctctttttgttttcatcgatgtgcaagaaattaatcttcgtgtttcccgtcgatcagcactcgatcgatcttccccatgagaggaggaagaaaaaatgtaggacgaaatgcatagccgtttcttgttcgtgcaacggccgcaagaacggttaccgatcaagaaaaatgagtgatctgtttcttgattccttttcccccaccagtagatgaaaaaaacgggtgcaataaatgcctccagcttttttgatacgacctcctcttccgatttacgtttcgatgtcagatactgttgtgttttcagtcggctggggtttgatcatcggataagtaaaatgttttttttttcttctgcgcatctcgattgaatatagtttgatgcaaatgcgtatttgttttcctgtcgtcttggatgttaggaggaagcgatatgggttgcttttcatgctgcggagcggatgatgtcggcaagaagaagaagcgcgacgatccttacgtcccgatccctgatccaggttgctaatcctctctctctttgcttttcacctccgtgttgtttgatcatggttgcaaatcgatggaagcagtgaattcattcttgatcgaacaaactattgcttccagatttgatgcaaaattttgatgttagcaggcactgtttgttggttgaactttgcaaaagggatactgtcctcttttatccaataaaaaaagtatgcgtgataatgtgtttagataattctgttacattgcacttgggtattgcattgcattcccttgtgtttcttcaatagataggggtaatagtaaataatgccagatggaggaggagtgcccaaatagctagttgaatgaattggtaaacaaatatgtcagacattatttaattagttgccttgaaaaagttgcacttgcatgcaaataaaattcatcaatacaaacaaacagcttgttgccaaccctgttttagattatatgatctgtgttttctttatcagaaatcccttatcatcatttcattttttttttgtctctctttcaaagggaatggtcaattccttttttatctttttatattgtatcctttcaaatcgatatagtcaatacaaaactgccattacctctaaaaaatttgtattccaagtttgtcgactggaaatatgtgtgattttttcatcagactatttctcagcacatgagaatcaagttttgaggtatagttcaactcaatacaatctaaaactacacaggaatggataaataaataaatttaaccttgaaaaaaaagttaaaacatgtctcattgcataaatcagcatcgctgaaagccaggagtttttcagcttagcattttttttttggtagcaaagggcaaggagcccccatttctattaccagaaatgtaacttgctacaaagttcttacatctactgaaactgaaaagacagaaatgccagcatagaatgatgtgatttcattaaaaatgttccacacgcaggtggtaactatggacgtagcaagcccgggcccccagccccttcgcgttctccccccaccagcagaaatctgccaattgcagtaccggcaattccccttgatgaaataaagggaataaccaagaacttcagcagtgatgctctcatcggagaaggctcgtacgccagagttttctttggtgtgctgagagatggcaggagatctgcggtgaagaagctcgactccagcaaacagcctgatcaagaattccttgtgcaggttctgacactcttttctttcattctatatgactatatcttgtcaatgtatatatgatgcaacggactagcttcgtctcacctacatttttctttttcaggtttcagccgtttcacgactgaagcatgagaatattatccaacttatcggatattgcgctggagggagcatccgtgttcttgcttatgagtatgcaccgaggggctccttgcatgacattctccatggtgaggaatatataacctttctttattttgatattactcttagtttgtcgcactcatgaagaaatgctatccgaatactgtaaatggcattagaccagaaggattcaaattagcatttacattgtcctcattggtatgaataatgtaaccaaacaaaatagattgattggcaatttatgatgtactattagcatttatattgattggctcgtacattattaatgcatggctgatgcgtatctggatcatgatcacaggtaaaaagggtgtgaagggagctcagccaggaccagctctatcatggatgcagcgagtgaagattgccttgagtgctgcaaaggggcttgagttcctgcacgagaaggcggagcctcgtgtcgtccaccgtgacatcaaatccagcaacattatgctctttgacaacgatgttgcgaaagtaggagacttcgatgtatccaatcagtccccggacatggcggctcgcctccactccactcgtgttcttggcaccttcggttatcatgctcctgagtatgcacccaaacatttcatgttcttgatctgttactcatcaagtaggcaatttttaggatgaaatgtgctcttatacgactgtacttactgttctattttggaatctgccaggtacgcgatgacagggcagcttagcacgaagagcgatgtctatagcttcggagtcgtgttgctggagcttttaactggtcgcaaaccggtcgatcatacgctgccccgtggccagcagagtcttgtgacatgggtactgatctttccatcatccatgaaaactttgtcttggctcttgacaagatgaacaaacaactcatgtactgtggactgtattgacaatattgcaggctactccaaggctaagtgaagacaaggtgaagcaatgcgtggatccaaggcttgaaggggattatcctcccaaggctgttgccaaggtaaaaataacttgtgttccagatggtttctgttcctatcaagtaacacaaatttcaatgcatactgattaggttgcaccagattttaaacatgaccatgttccagttaatatactaaacagaacatactagagacatttttctttatcaaattgcacagctttttttttgcgggaaagtacaatggaaactacaattattacctttttttttctaagaacacaaaacattttcatcttgaattaggagagcatatcaagcattttctgtcctatatatacatctgaactactagtacattataacaacaaagagtttacatctcaaataaccaagtggcagcctggattttttatatatatataatggaaatggtttagcctctgccattaggcacagtggtagcccgaaatcacgtatgccatgattcttaccagcttgatggttttggcaacttaaacagatggctgccgtagctgcgctgtgcgtgcagtacgaggcggacttcaggcccaacatgagcatcgtcgtcaaggctctgaacccactcctcaacagccgcccgaacaatcgccccgcctccttcaccgacgccggcgagcgatccggattatgagcacgccatgaccatttttctcatcggactccggtgacaccacgacgacgggagggaaggctcggtttccatggattccaaatgtgtaaaaattcagtggaaatgaagagggtagctctgctgctgcctgtcttgttcttgcctcgatctccagactcctgttgctgtaaattgtcgcaatccctcctgattatgtgttcctctcgacctcttgtagtagtttgagaaatggatgaatatatatacttcttgcttgtccacttttagcttccactgtcaccagacaagttttgttgttctgcgtacaatgggcagattaataattctcatctcatc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0323100, RefSeq:Os01g0323100