Os01g0323300

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Revision as of 04:37, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0323300| Description = CRS1/YhbY domain containing protein| Version = NM_001049431.1 GI:115436275 GeneID:4326994| Length = 6503 bp| Defini...")
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Gene Name

Os01g0323300

Description

CRS1/YhbY domain containing protein

Version

NM_001049431.1 GI:115436275 GeneID:4326994

Length

6503 bp

Definition

Oryza sativa Japonica Group Os01g0323300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:12487119..12493621

Sequence Coding Region

12487119..12487872,12489254..12489381,12490029..12490254,12492418..12492545,12492660..12492813
,12493188..12493621

Expression

GEO Profiles:Os01g0323300

Genome Context

<gbrowseImage1> name=NC_008394:12487119..12493621 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:12487119..12493621 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgccgccgccgccgcagcggccatccccctcccgcgcaggccgcgccaacctcttctcgtccccgccgcctcccctccccaactgctacgaccccaagcaccgccgccccgcgccgccgcctctcccctccgcccgtcgcctccccagcaaccgccgccgccgccacgaccagcctccgaatccgaccaccggcaatggcgggaaccccgccttccgcgcgccgcacctccgcaccgcctaccgcaagcccgtcccacccgtggcggcggcgggggagggcgaggcgctcctcgccgccgacgccagcgacgccgccgacgggcgggccgtggtggtggggccgtcggggctgtcgttccggctcccgggcgcgccgttcgacttccggttcagctactccgagtgcccccgcgccccgccggtggccatccgggagcccgcgttcctgccgttcgcgccgccgacgatgccccggccgtggacggggaaggcgccgctgctgaccaaggaggagaaggcgcggcggcggggcgtgcggctgcacaccccgctcggggaggaggcgcccaggacggtgagcgcgcacgggatcatgatggaggtgagggggaggaggaagctggacctggccagggtcagccccggcgacggcaggagcagggaggaggtgctcggcgagccgctcaccgccgccgaggtgcgcgacctcgtcaagccccacatctcgcacaaccgccagctcaacatcggaagggatggattgacccacaacatgttggaaatgatacattgtcattggaggcgccaggaaatttgcaaagtgagatgccgaggagttccaactgttgatatgaagaatctgtgctatcaccttgaggaaaaatcaggcggaaaggttattcaccgagtaggtggtgtagttttcttataccgtggaagaaactacaaccctcgaacccggcctcgttatccactaatgctttggaagccagctactcctgtctatccaaaacttatacaggaagccccagaaggtcttacaaaagaggaagcagatgaaatgagaagaagagggaaggatctgctgccaatttgcaaattagcaaaaaatggtatatacatctatcttgtcagggatgttcgagatgcttttgagggaagtgatctggtgaagattgactgcgaggggttgaatccaagtgactacaaaaagattggagcaaaactaagggatcttgttccttgtgttcttttgtcgtttgacaatgagcagatattaatgttcagaggcaaggaatggaagtccagatatccaaagcctctgactcttattccaaaaattcgaaagaataatgttccaatgtcatctgatgagagtagttcagatgaagccactgatgatgatgaccgtttggcagtaagagaagtactgagacctaaaatgtttgaactatggacaaatgcgattgagtcatctgtggcactgatgttggatgatgctgaagtggatgctcttacacctgattcccttcttacaagggtagaggacttcagtgttacatctcaggttgtcgaacattcatttccagctgtgcttgtggccaatgatgaatcaaacccagatgtcctaaatgctgaatacaccgaagatgagcctgagacaggtacacttgaaccccaacaacatgagtttacagaatcttctgatgtcgcagaggatgatcatttcgaagatgacatgcttaagcgtttggagtcatcagtcccattgggagcattaccgatcgacgcagtggtaaaacagttgaatgatgagtga</cdnaseq>

Protein Sequence

<aaseq>MSPPPPQRPSPSRAGRANLFSSPPPPLPNCYDPKHRRPAPPPLP SARRLPSNRRRRHDQPPNPTTGNGGNPAFRAPHLRTAYRKPVPPVAAAGEGEALLAAD ASDAADGRAVVVGPSGLSFRLPGAPFDFRFSYSECPRAPPVAIREPAFLPFAPPTMPR PWTGKAPLLTKEEKARRRGVRLHTPLGEEAPRTVSAHGIMMEVRGRRKLDLARVSPGD GRSREEVLGEPLTAAEVRDLVKPHISHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKV RCRGVPTVDMKNLCYHLEEKSGGKVIHRVGGVVFLYRGRNYNPRTRPRYPLMLWKPAT PVYPKLIQEAPEGLTKEEADEMRRRGKDLLPICKLAKNGIYIYLVRDVRDAFEGSDLV KIDCEGLNPSDYKKIGAKLRDLVPCVLLSFDNEQILMFRGKEWKSRYPKPLTLIPKIR KNNVPMSSDESSSDEATDDDDRLAVREVLRPKMFELWTNAIESSVALMLDDAEVDALT PDSLLTRVEDFSVTSQVVEHSFPAVLVANDESNPDVLNAEYTEDEPETGTLEPQQHEF TESSDVAEDDHFEDDMLKRLESSVPLGALPIDAVVKQLNDE</aaseq>

Gene Sequence

<dnaseqindica>1..754#2136..2263#2911..3136#5300..5427#5542..5695#6070..6503#atgtcgccgccgccgccgcagcggccatccccctcccgcgcaggccgcgccaacctcttctcgtccccgccgcctcccctccccaactgctacgaccccaagcaccgccgccccgcgccgccgcctctcccctccgcccgtcgcctccccagcaaccgccgccgccgccacgaccagcctccgaatccgaccaccggcaatggcgggaaccccgccttccgcgcgccgcacctccgcaccgcctaccgcaagcccgtcccacccgtggcggcggcgggggagggcgaggcgctcctcgccgccgacgccagcgacgccgccgacgggcgggccgtggtggtggggccgtcggggctgtcgttccggctcccgggcgcgccgttcgacttccggttcagctactccgagtgcccccgcgccccgccggtggccatccgggagcccgcgttcctgccgttcgcgccgccgacgatgccccggccgtggacggggaaggcgccgctgctgaccaaggaggagaaggcgcggcggcggggcgtgcggctgcacaccccgctcggggaggaggcgcccaggacggtgagcgcgcacgggatcatgatggaggtgagggggaggaggaagctggacctggccagggtcagccccggcgacggcaggagcagggaggaggtgctcggcgagccgctcaccgccgccgaggtgcgcgacctcgtcaagccccacatctcgcacaaccgccagctcaacatcggtaaactaactgtactatactactcctacagtatcttttatctttgctgatgctaatcgaccaaacttcagaagttcagattagagtgaattgtgttacaatctaaccaggaagtacttcaaactgagtaatttgtgtacatgttggtttaaatttcacgaaacagctgtaataatctgtacttacgaaggattgcggagattttccatgttctgttagttgtcacattgggtagcaacatggttcagctaactcataattaatgcctaagcaaatctagttcccgtacatgggtagatattggtagtagatcttctggcgatgactgcctgtcatgcttctaaatttgtggtggtaccatgccatccaataaaatgtgaaatggttccttgttctaaggataagatgctagactgtgttacttatatcacaactctgccagaagtaacgggaaactgttttaaacactcgggtggacgtccacccgagtgttgcatgtcatctaaatggttatgaaaagttttcaaaaaaattgacatgataggttaatatgtaatatatcacttcacaaacatgcaagttcaaattcgacttctacaaattgtaacaaaaataacaaatttgactgtgaatatacgtatactagttagagtttgatttgttatttttgttacaacttgtagaagtcgaatttgaacttgcatgtttgtgaagtgatatattacatattaacctatcttgtgaatttttttggaattttttcataatcatttaggtggcatgcaagaaacgggtggacgttcacccgagagattagaatccatcatcgatcatgtgcagctgcttcttcaaactcgagtagtgtgtgcacaatgagtaattgtgcaggtctgattcactctcacaaagcgctcattcacaaccaaaaaaaaaaaaagtcttaaagcatcctgtcacagaaccttgtacagataacatatacctaatgtcattagtaatttgccatgtacccaacaaccttgctgaaaaaaatatctcaaccaccattattgcacagaaagagtgtgcaaagcatatgcatactgctgagattcacagctgcttaagtatcatgtcacagcccacagtctcatacttcatctatgataatcaatgttgtagtagtcattgagataacaaattgggccagaacttggaacatgtttgtcaaaactagctggaaactaaaaagaaaaatcattttgtggaaaactttactcctgcaccacttggacattttccttgaatacttgataaattaatgcagagctaactttgttgctgatactagtataactaagtagtatacattttctgtttttttttttttttgtacttgtaggaagggatggattgacccacaacatgttggaaatgatacattgtcattggaggcgccaggaaatttgcaaagtgagatgccgaggagttccaactgttgatatgaagaatctgtgctatcaccttgaggtatctaccattaccaagtataactatttttgaattgtgctcatgtacatgcattcatgcactgtgggaatatggacatgccacctcctggtaccatccacagaatggttgagaagtaccatttataaatctgcaattcaatgctatgttgtgttctttacacttaagtgaatttattgacgttgagaaggatgctggtgaagttcgttttgtttcctggtcttcataatggctcatatataatgtaagatagcatcacaatttcttaaccagaaaataagacaaaaatgttgtatgttatttggcctttcttgtacataagggaattaagactctggttgggatgtggctttaccccccaattccctaagttttaaatttattatattcatggtaaaatgcaataatgtaggacaatagtttcagtatggatattgtgaagccaaaggagtatgttcataaaatagaattgcatgttttcttattagaaaagagtacatgagcctggactggaggacttgtctattgttagccctctatgttgtggaacaagaagacctctgttttcatatatgcacacttcaacattttccaacacaggtatcttgttttattatgctccagacatgtgacatccacaattacaggaaaaatcaggcggaaaggttattcaccgagtaggtggtgtagttttcttataccgtggaagaaactacaaccctcgaacccggcctcgttatccactaatgctttggaagccagctactcctgtctatccaaaacttatacaggaagccccagaaggtcttacaaaagaggaagcagatgaaatgagaagaagagggaaggatctgctgccaatttgcaaattaggtatgtatttatggattaggctgaatatttgtgttctacacgatgttcagaaccccttgatgtatttacatactgaaaccttgctttattcctgtgtcatgttccataggaaacagtgcatgatagacatcaattccaatcatgtacaaacacaccgttgtgagtataaatgtagcttatttctgaaggaacctaaaccctgctctacaccatttaagcataacctagtaccatgaatccagagctaattgacaaggaatttccttttggtcatggtttctcattttgctttttttatcatttataagattgtgttgcaagtgtgcaaggtactccctctggtcataaatatttgatgcttaggataagatttgcttaaacatataaaactttgaccatgaataagtttttcaaatgcttagtttacaacataaataatggtgtatgtacatttgcctcgaaaagtagttactgtatcataatatcataaacttactactccctccgtttcacaatgtaagtcattatagcattacccacattcatattgatgttaatgaatctagacatatatatctatctagattcattaacattaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacggaggaagtagaattttataaatttattctgatataaattttgtcggtaatatgggcccgggggtatcatgtttagatgaaggaggctgccccccaatgccacgtggccctcccccgagaggggtcgagcccgaggtagggtggtggccactccctggccgagactagagggagaaggctgccccaggcgccacgtggccctcccccgaggggggatcgggcccgaggtcgggcggccaccgccccctcccgtgactaggggtcgggctcccccgaccccctctttaggtcaccacgtacggtgggttaggtgtccacctataggtgcccacctacccgcatttatggcgacccaagcggtcgcgccacgccgcatttaatgccgcgtgcagtatactcaaccggtctgtgaccggtcgaatgaccgatgggactgggtagtgcgcctgtgcgctgctcgtgtgtcaggcggcgtgcagcctgacatgtcccatcaaataatgatggtgagaggttctcatcctcttatcccagccggagtcggtcctcccgctctggtcaaagctatgctcccgtttcccggtgtaataggagcccagaagtcttcacccattaaatggtgaatgacatgggcgccccccgtgtcaggcggcatggtgtggtaggccccaagttaaggaacaagacatgcatttaatgtaaaatattgtaatacttctcgacaaagttaggttgttgggtctatgtggtaaccccttgaggtataaaaggaggtccaggcctagtaagagagaaggaacttccgagcgaactggcgcttgggtctcgcaaccccaagcacttgtgttctacactcaatcaatcaagcacaggagtagggtattacgcttctcagcggcccgaacctgtataaaccccttttgtctcatcgtctttgggggattgaaccctctcaagatcacacagcttcgctcaccaagcactcggatctcacccgctgtccccggccgaactcacaaagagggggcctcacggttccctgatggaggagttcatttgccaacaaatttggcgattgggattttgaaagttcgattgaatcttgtcctaaacatcaattatttatgaccggatggagtaatagacactggcagagctccttgagtccagagtgggttttggtcccctgtttttttatggatattgcttaagaaaactattgattatgaaaatatggcaaccaaatactaaagcggaatgctcatgataaggttgtaaatatgcttgtttgcttggtctgtcctttagtttgctccaccctccgccaatgtgtatacagtttgctaatactatgatttttgttatatctgtcttccatctggtgatgggaatatactggatttactgaggttactggcatgtatattacttacctcttaccctgtaagtttgtaacggacagaatacgaaaataagcaaaatctaccattaatgacatcctattttttttctttgttttgcagcaaaaaatggtatatacatctatcttgtcagggatgttcgagatgcttttgagggaagtgatctggtgaagattgactgcgaggggttgaatccaagtgactacaaaaagattggagcaaaactaagggtccaactcatccccatgcctttctctgtttcatgtcattgcagatagttgaagcgaaacctgtatatacttcctgaccccctcagataaagtttcttgtttctgtacatgcaggatcttgttccttgtgttcttttgtcgtttgacaatgagcagatattaatgttcagaggcaaggaatggaagtccagatatccaaagcctctgactcttattccaaaaattcgaaagaataatgttccaatgtcatctgatgagagtagttcaggtgtgtatcctcaactttctacccttatcacaagtgagacaggagaaaattttcaagcagtgataataacaaccatataagatccaactggaagcagtgtaaccatgatccgattgctttaaaattcatgtacattttacatagaatagcgtgctgcaatcagtgtttgcattttggatctatttctgcaaatgatttatcagatgttttagttcgcgattaatttagtaatactctcaggtgctcgaatgtcatggaaaccacatgctgcccttttgttctgtgtgaacaaaatctccttttccagttattttatagtttttttttctcaagagctttgtactctctagattaacatgcaatttattgtacagatgaagccactgatgatgatgaccgtttggcagtaagagaagtactgagacctaaaatgtttgaactatggacaaatgcgattgagtcatctgtggcactgatgttggatgatgctgaagtggatgctcttacacctgattcccttcttacaagggtagaggacttcagtgttacatctcaggttgtcgaacattcatttccagctgtgcttgtggccaatgatgaatcaaacccagatgtcctaaatgctgaatacaccgaagatgagcctgagacaggtacacttgaaccccaacaacatgagtttacagaatcttctgatgtcgcagaggatgatcatttcgaagatgacatgcttaagcgtttggagtcatcagtcccattgggagcattaccgatcgacgcagtggtaaaacagttgaatgatgagtga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0323300, RefSeq:Os01g0323300