Os01g0329900

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Revision as of 04:38, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0329900| Description = Similar to Lipase homolog (Fragment)| Version = NM_001049459.1 GI:115436331 GeneID:4326986| Length = 3984 bp| Defin...")
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Gene Name

Os01g0329900

Description

Similar to Lipase homolog (Fragment)

Version

NM_001049459.1 GI:115436331 GeneID:4326986

Length

3984 bp

Definition

Oryza sativa Japonica Group Os01g0329900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:12876757..12880740

Sequence Coding Region

12877001..12877445,12878319..12878504,12879262..12879414,12879874..12880400

Expression

GEO Profiles:Os01g0329900

Genome Context

<gbrowseImage1> name=NC_008394:12876757..12880740 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:12876757..12880740 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgagtgggttggtgaccgccggcggtggcggcggcggcaaggtgatgagcctgcggctgcagtactacgtggtgctgggcggggtgacggcggtggtgctcctcgcctgcctcaggtacacgcctactgccgccgccgtggccgccgtcggctacggcttctggggcaacggcgacggcgctagccttgccgcagctggggcggcggcgaccaccgtcggtggcactggtactagcgctgctgcgacgacgggtggtggcggcgccggcggggggcggtctccctctcgcgtggtgatcttcaacttcggcgactccaactcggacaccggcgggatggcggcggcgatggggttgaacatcgcgctgccggaggggcgcacctacttccgccgccccaccggccgcatctccgacggccgcctcgtcatcgacttcatctgtgaaagcctgaacacgcctcatctgagcccgtacctgaagtcactgggctccgacttcagcaacggcgtcaacttcgccatcggcggctccacggcgacgcccggaggatccaccttctcgctcgacgtccagctccatcagttcctctacttcagaaccagatccatcgaactcatcaaccaaggcgtgcgaacaccgatcgatcgcgacggattccgaaacgccatctacaccatcgacatcgggcagaacgatctcgctgcctacatgaatctcccctacgaccaagttcttgccaagatccccaccattgttgctcacatcaagtacaccatcgaggcgttgtacgggcacggtgggcggaagttctgggtgcacgggacgggggcgctggggtgcctgccgcagaagctgtcgatcccacgcgacgacgactccgacctcgacggcaacgggtgcctcaagacgtacaacgcggcggcgagggagttcaacgcgcagctgggcgcggcgtgccggcggctccggcagcggatggcggacgccgccgtggtgttcaccgacgtgtacgccgccaagtacgacctggtggcgaaccacacgctgcacggcatcgagaggccgctcatggcgtgctgcggcaacggcggcccgccctacaactacaaccacttcaagatgtgcatgtccgcggagatggagctgtgcgacatgggcgccaggttcgcgagctgggacggggtgcactacaccgaggccgccaacgccatcgtcgccgccagggtgctcaccggcgagtactccacgccgccggtcaggttcgccagcctcgtcaactccaccgccgtacccaacgacggctaa</cdnaseq>

Protein Sequence

<aaseq>MTSGLVTAGGGGGGKVMSLRLQYYVVLGGVTAVVLLACLRYTPT AAAVAAVGYGFWGNGDGASLAAAGAAATTVGGTGTSAAATTGGGGAGGGRSPSRVVIF NFGDSNSDTGGMAAAMGLNIALPEGRTYFRRPTGRISDGRLVIDFICESLNTPHLSPY LKSLGSDFSNGVNFAIGGSTATPGGSTFSLDVQLHQFLYFRTRSIELINQGVRTPIDR DGFRNAIYTIDIGQNDLAAYMNLPYDQVLAKIPTIVAHIKYTIEALYGHGGRKFWVHG TGALGCLPQKLSIPRDDDSDLDGNGCLKTYNAAAREFNAQLGAACRRLRQRMADAAVV FTDVYAAKYDLVANHTLHGIERPLMACCGNGGPPYNYNHFKMCMSAEMELCDMGARFA SWDGVHYTEAANAIVAARVLTGEYSTPPVRFASLVNSTAVPNDG</aaseq>

Gene Sequence

<dnaseqindica>245..689#1563..1748#2506..2658#3118..3644#attacatttccaccacgcggccgccgcgcgcgtacgccctcacatcacctttccaccttcttctcctcctcctcctcctcctctctctctctctctctctctctacctctttcttgtctccaactagaagtagctatagctacctagctccacgacaagtgagctcccggagagcaggaggaggcttttggtagcctccctcgccgccgcttcgccgcatttcggttgacgttgtggcgacaatatgacgagtgggttggtgaccgccggcggtggcggcggcggcaaggtgatgagcctgcggctgcagtactacgtggtgctgggcggggtgacggcggtggtgctcctcgcctgcctcaggtacacgcctactgccgccgccgtggccgccgtcggctacggcttctggggcaacggcgacggcgctagccttgccgcagctggggcggcggcgaccaccgtcggtggcactggtactagcgctgctgcgacgacgggtggtggcggcgccggcggggggcggtctccctctcgcgtggtgatcttcaacttcggcgactccaactcggacaccggcgggatggcggcggcgatggggttgaacatcgcgctgccggaggggcgcacctacttccgccgccccaccggccgcatctccgacggccgcctcgtcatcgacttcatctgtcagtctctctctctcttttgccacaatgccactcccactcaccatcactctactacttcaccctcttcaatttcaccgcagtcaaactcctacagtacattgatttacagccaaaaaaagagaagaaagaaatatgagaacttcttccagtttctgaactgaaaacaaaccgaagccgcagttttcttgatgaaaaaaaataagagagagagagagagagagagtaacaaatacgagtacaagtattatccaactgccgaaaccgcagggaaagcaagaggggaaagggatgggggtcgaggtgaagttaacaaaagttgatgagatgtgacactgctactcaaagcggaatcacaagaaatagtaaagcgattcctacagcgtctgcagcaacgggagctgaggctgagctgcagtggcaagtggttgtgggggcgacgtccagtgcccaaaattattggtgcgagacatcaatggcacacggcccggtcctctgcacaatctgccccagtaaatgtagcaggagacttttccagataccgcggcacccaaaataaatcaacctttcttctttttttccttttcttttcacatttcgtcgattccacgatgcacatcacatacacaaatttggggatgttcttccgacatgtgaagtgttcttccgacaaaatttgaaactatctgaatttattaaatacggttcaagttagtaaaattcatttaggaaatttggggctgcacactcacacctactctgttttttttttcctcctctgaaataggcaggagggacacctcacaaattgacaattcagacataggcggtgtttttaatttggtggtgatgtaaccatttgcatatatgcaggtgaaagcctgaacacgcctcatctgagcccgtacctgaagtcactgggctccgacttcagcaacggcgtcaacttcgccatcggcggctccacggcgacgcccggaggatccaccttctcgctcgacgtccagctccatcagttcctctacttcagaaccagatccatcgaactcatcaaccaaggtctgtcaaatcagtcatgcccggccacattttgattccctaccttgctgcactgaagaatcagtaagatcacagtaagaaaaacgatgataaattgtgtaccaaaatctaattgggaaattgtatatttggaggctgatgtcgcttttggagggaaaatggtagagcttacttagttgttgtggacataattatgattcaaaaattaatttgctttctgttgagccttgacttaagcataaacaaatgtaagctacatctccaaattaattctgagcttggatatgacattgcacatactacctccgtcccaaaataactgtagctataaatatgcgtgctcagcgtttcgaccatccgtcttatttgaaaaaattataaaaaatattaaaaaaatttgtcacacataaaatactattcatgttttataatctaataacaataaaaatactaaccataatcttttttcaaataagacgaacggtcaaacgttggacataaacaatgctaaaactgtatttattttgagacggatggagtaaaatctatcatatggcccatattcaatttgctcagctgtcctacaaaacatttccagtactctcttcttgaaccatatacaaaagacaaattgaagagaatcttcctgacaaaaacaaaacaaaatgtaaatgattgcacgtacgaaaaaagaaagagaaaaactattgcaaacatgtcctgaccagctcacttgtctgttgggggtttgatgcaggcgtgcgaacaccgatcgatcgcgacggattccgaaacgccatctacaccatcgacatcgggcagaacgatctcgctgcctacatgaatctcccctacgaccaagttcttgccaagatccccaccattgttgctcacatcaagtacaccatcgaggcaagctcaattctctttatcatgatccgattattttgtcatttggttgatgattagggtactatttaggggaggttttagtaactaccgcttctctcaaaacctctagttacctaatagtattaaaaaaataagctaaaagtcagcttctccatatttttagatattgactaccaaccagctatttcttagtagaatcttaatctctaaatagagcttataattagtttcactgggctactatagaatgctataccattaattccaatgaaatgtttacgtgttgacgttagtatggtatcatagataccacatcaaggtatcaaacacgatactcatatataccagatctggtatttagatatcatgatgacgtcatcataacatcagctaaacggtataccgttttgtagtatttttattagcttaatgacacaattaacgtcgtggtggatgcaggcgttgtacgggcacggtgggcggaagttctgggtgcacgggacgggggcgctggggtgcctgccgcagaagctgtcgatcccacgcgacgacgactccgacctcgacggcaacgggtgcctcaagacgtacaacgcggcggcgagggagttcaacgcgcagctgggcgcggcgtgccggcggctccggcagcggatggcggacgccgccgtggtgttcaccgacgtgtacgccgccaagtacgacctggtggcgaaccacacgctgcacggcatcgagaggccgctcatggcgtgctgcggcaacggcggcccgccctacaactacaaccacttcaagatgtgcatgtccgcggagatggagctgtgcgacatgggcgccaggttcgcgagctgggacggggtgcactacaccgaggccgccaacgccatcgtcgccgccagggtgctcaccggcgagtactccacgccgccggtcaggttcgccagcctcgtcaactccaccgccgtacccaacgacggctaagccttatcgatctcttgctgctacaatgtctctcctttgatttggtggatcaaccagacaagagagacaaccaatgcaagctgcagaaagaattattagtggatcgatcgagcagctggctttggctaagctttggtggtgagctcacatttgtgtggagctcacgatcagaggatggggaaggtagtgtgactgataggatggaccaccaaactgagagtgtgttgttgtgggggtgggcctctttagctttacatatatcatcaaacatgtaacatgtgtgtgtgtggaagtgtaattcttttaataattgatcaggaaaatgatgggggtgcacagc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0329900, RefSeq:Os01g0329900