Os10g0482900

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Revision as of 08:42, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0482900| Description = Glutaredoxin domain containing protein| Version = NM_001071417.1 GI:115482577 GeneID:4348928| Length = 4855 bp| Def...")
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Gene Name

Os10g0482900

Description

Glutaredoxin domain containing protein

Version

NM_001071417.1 GI:115482577 GeneID:4348928

Length

4855 bp

Definition

Oryza sativa Japonica Group Os10g0482900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:18688858..18693712

Sequence Coding Region

18689168..18689321,18689486..18689682,18689774..18690059,18690150..18690386,18690608..18690663
,18692424..18693608

Expression

GEO Profiles:Os10g0482900

Genome Context

<gbrowseImage1> name=NC_008403:18688858..18693712 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:18688858..18693712 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggggaagagaccctcgtggccatgccgctcgcgccgccgcatcaccaccaccaccacgcccacctccccgcgctcccgcacctcgccgcgccgcccccgccgccaccgccgcccgcagagaccgaactcacggaacagcgagaagaggaggtcccggtggacgacgtcgtcgaggcggcggcggacgtgccaaggagggaggagggccttgtcgtcgatgggggtgaggacgtgtactacgcgaggaggatgctgcagggggtggtgctccggccgccgccgcacctgccgcagccggaggcgccgccggggctgaccagggcgctctccgcgccggcgcctgacgggtacgtcgaggaggaggaagagcagaggcccgtcgagaggtccgcctccgtgaactccgcggcgtccgccgtcgtcgtggacgtggcctccatcgggcggttcttccgcgaccgccgcgacgtgctctcgtcggccatcacccggcgaatctcctcgctgaaggaggcctcctcctcccctcctcctccggtggggatggacacctacggcgtgcaggagatccaccttcccaacgtgaaggtcaccgtccgcctcaaggacgccatcgaagccgacgcggaggaggacgatgctgtgggcggcggcggcgacgacggctactcgttctcgggcagccacatcaagggccgtgtcagcttcttctcccgctcgggctgccgcgactgcgccgccgtgcgcgccttcttccgccagtccgccctcccctacgtcgagatcaacctcgacgtcttcccggagcgcgaggccgagttcgcctcccgcgcgggcgcctccgcgcgcgtgccccagatcttcctcaacgagaagctcctcggcggcctcgtcgtcctcaactccctgcgcaacagcggcgagttcgagcggcgcgtgcgtgacctcgccgggagacggtgccccgacaccgcgccgcgggtgcccgtgtacgggttcgacaacgatcccggcaaggagggcggcgacagggaggacgccatggtgggcatcgtgagggtgctccggcacaggctcccgatacaggaccggatcgtgaggctcaagctcgtcaagaactgcttctccggcgccgacatggtcgacggcatcgtgaaccatttggaatgcagcaggaagaaggctgtggagatcggaagagaactggcaaggaagcacttcatccaccatgtcttcagagagaacgacttcgaggatggcagccagaacctgtaccggttcttggagcacgaccctgccatcccaaagtactacaacttcatcaggggagccaccaacgacggcgagccgaagctggccgccgccatcgggcagaggatgaccaagatcatggttgccatcctggaggcctacgcctccgacgatcgccgccacctcgactacagccgcatcgccgccagcgaggagttcagaagatacgcgaacatggtgcaggaactccagagggtggacatgtcggcgctcccggccgaggagaggctgccgttcttcctgaacctgcacaacgcgatggccatccacgccgtcgtcagggtcggccagccgggggccatcgaccggcggtcctcctccaacttccagtacgtcgtcggcgggcacccgtactcgctggcgacgatcaggaacggcatcctccggtccaaccgccggcagccgtacaccatcgccaagccgttcggctcgtccgacaagaggctcgagttggtgcaggggaaggtgaacccgctggtccatttcggcctctgtgacgccacgaggtcgagcccgatcgtgcgcttcttctccacgcagggggtggagccggagctccggcacgcggcgaggaagttcttcctcaacggcggcgtggaaatcgacctcgagagccggacggttcacctcaccagtatcatcaaatggtacagtgttgatttcgggcaggacagggaaaccctcaagtggatcctgaactatttggacccgaccaaagctgggctcttgacacacctcctcaacgacggtggggcgatcaacatctcatatctgaactacgattggtccttgaatgtttga</cdnaseq>

Protein Sequence

<aaseq>MGEETLVAMPLAPPHHHHHHAHLPALPHLAAPPPPPPPPAETEL TEQREEEVPVDDVVEAAADVPRREEGLVVDGGEDVYYARRMLQGVVLRPPPHLPQPEA PPGLTRALSAPAPDGYVEEEEEQRPVERSASVNSAASAVVVDVASIGRFFRDRRDVLS SAITRRISSLKEASSSPPPPVGMDTYGVQEIHLPNVKVTVRLKDAIEADAEEDDAVGG GGDDGYSFSGSHIKGRVSFFSRSGCRDCAAVRAFFRQSALPYVEINLDVFPEREAEFA SRAGASARVPQIFLNEKLLGGLVVLNSLRNSGEFERRVRDLAGRRCPDTAPRVPVYGF DNDPGKEGGDREDAMVGIVRVLRHRLPIQDRIVRLKLVKNCFSGADMVDGIVNHLECS RKKAVEIGRELARKHFIHHVFRENDFEDGSQNLYRFLEHDPAIPKYYNFIRGATNDGE PKLAAAIGQRMTKIMVAILEAYASDDRRHLDYSRIAASEEFRRYANMVQELQRVDMSA LPAEERLPFFLNLHNAMAIHAVVRVGQPGAIDRRSSSNFQYVVGGHPYSLATIRNGIL RSNRRQPYTIAKPFGSSDKRLELVQGKVNPLVHFGLCDATRSSPIVRFFSTQGVEPEL RHAARKFFLNGGVEIDLESRTVHLTSIIKWYSVDFGQDRETLKWILNYLDPTKAGLLT HLLNDGGAINISYLNYDWSLNV</aaseq>

Gene Sequence

<dnaseqindica>4392..4545#4031..4227#3654..3939#3327..3563#3050..3105#105..1289#gcctcgcccatcgaaacccaaatcccaaatctcgttttattacgaagcctccccgttccgttccgttcctcgtaaacccagaggcgcgcgagagagagagagagatgggggaagagaccctcgtggccatgccgctcgcgccgccgcatcaccaccaccaccacgcccacctccccgcgctcccgcacctcgccgcgccgcccccgccgccaccgccgcccgcagagaccgaactcacggaacagcgagaagaggaggtcccggtggacgacgtcgtcgaggcggcggcggacgtgccaaggagggaggagggccttgtcgtcgatgggggtgaggacgtgtactacgcgaggaggatgctgcagggggtggtgctccggccgccgccgcacctgccgcagccggaggcgccgccggggctgaccagggcgctctccgcgccggcgcctgacgggtacgtcgaggaggaggaagagcagaggcccgtcgagaggtccgcctccgtgaactccgcggcgtccgccgtcgtcgtggacgtggcctccatcgggcggttcttccgcgaccgccgcgacgtgctctcgtcggccatcacccggcgaatctcctcgctgaaggaggcctcctcctcccctcctcctccggtggggatggacacctacggcgtgcaggagatccaccttcccaacgtgaaggtcaccgtccgcctcaaggacgccatcgaagccgacgcggaggaggacgatgctgtgggcggcggcggcgacgacggctactcgttctcgggcagccacatcaagggccgtgtcagcttcttctcccgctcgggctgccgcgactgcgccgccgtgcgcgccttcttccgccagtccgccctcccctacgtcgagatcaacctcgacgtcttcccggagcgcgaggccgagttcgcctcccgcgcgggcgcctccgcgcgcgtgccccagatcttcctcaacgagaagctcctcggcggcctcgtcgtcctcaactccctgcgcaacagcggcgagttcgagcggcgcgtgcgtgacctcgccgggagacggtgccccgacaccgcgccgcgggtgcccgtgtacgggttcgacaacgatcccggcaaggagggcggcgacagggaggacgccatggtgggcatcgtgagggtgctccggcacaggctcccgatacaggaccggatcgtgaggctcaagctcgtcaagaactgcttctccggcgccgacatggtcgacggcatcgtgaaccatttggaatgcagcaggaagaaggtcagtaccacttgatcatttactagtacgatgcttcttcgtttgactttttgttctctttgggtttttttaaatctcaacttcttaggcgcttcgtttatctttggtgaactgtgcatgaagcatgaatagttcttgttgtttttggactaaagggcttgggtgtaaatagttacggaatgttaggggagagtaccattttcattgggattattataagattaaaatggatggtttaattcaagcaaaatatgtttgcaatttaaaagtaatttatgaatagaacttttatatacatgttattggcgatctaaaagcaatggctgaaaaataaacttcgatgaagaaaaaaaaatccaaaatcagctccaaatttgaagttgaaattttaaattttgacagataagtataagtataagtgaaaagatgaggcctggagtgcagtggtgcttgttttgacatatcctcaaaaatgtttattaattattaaacttgctattcttgagacgaactggtagtaccaatctctagtgaacacttttgtcatacatttaatacatttaagtcgcacgtaattaaggaaacaaacaaaattccacctggattaaggcggcaaaaatcagatgctgccatgtttggcctgtggcaacactctttcttgtggcaccatatcctgagttcctgaccccatagataatgttgaagtagtagtagagtactactagaatatatttacactgaaagcaaggggcccagatgcaaaaccacctaggatcacgtgagccgggcgtgtgggggagcgttacgtgctgccgtgccgaaccggtccgcgagcacgggccccaccggggttccggccattttcacttcccgcgtcacgccgcaacgggtgggcgggcgcggcccggcacgtaacggaacgggccaggtgcccgggcccacattagttatgcagggttcggtttcgttgttggttgcttcccgggacccacctccgacacccgaaggttcatcgccttggcgcgtacagcgtgtcactgccatccgggccccacatgatttcgtctcacttttgtttgatcgctacggggaagagccgtggctagactagtcgtcgtacaaaagctatgtgcggataaatggggcccacatttcggtgtatgttttgaccttgcctaatcgaactgggtcgtgcttatgtagtgtacttatgctacaagcaagattttgtgccgaccacgttggcggttgctgcaccaactcacacggaagtaatgctcggctcaacgcgaacttcgtggtgtacttgtaccaggtctaggtggttagtggattattttcggtcaggtcgatgcaaatctggaggagcttgctggaaaatctggcgcatttgactagtgattagtggggctgtggcgtctctgactagtgtgattagtggggttgaggtgaatgaacaaccgaaagaagctcgtgtccattggccatagcctcctcctaggtggttaagcaccgacccaactagcagttgtgcgatttattagtgggtttatctgaattcctgacccagtttttgacttctgttgtcgctgttgtatccttatccatagtagtcgccatacatcccggactcttatgtcctgctcattggagtcttgcgtggaatgccatggatttgggttatcttgtccccgtttcggaaattcggttattcatgtataacaactgacatccaaagcaactgttaactctgtctgtaggctgtggagatcggaagagaactggcaaggaagcacttcatccaccatgtcttcaggtcagcacacacgatctattctgaggccctgtttagtttctccaaaatgataaaagttttgctgttttgatgtactttttttcaaataaatctaaacactaatagcaaaagttggtaatttggcatttgtcatttaggaatctagagcagcaaattttggcaaaaaaaaaatattggatgactgaatctaaatgtattggtgtcatggtgtgtgtgtgtagagagaacgacttcgaggatggcagccagaacctgtaccggttcttggagcacgaccctgccatcccaaagtactacaacttcatcaggggagccaccaacgacggcgagccgaagctggccgccgccatcgggcagaggatgaccaagatcatggttgccatcctggaggcctacgcctccgacgatcgccgccacctcgactacagccgcatcgccgccagcgaggagttcagaaggtaacagctgcttcttccattgcttggatacaactacaagcagtgttaatccggcaatgtcggtgaccgtgatgagttcttgcgacgcagatacgcgaacatggtgcaggaactccagagggtggacatgtcggcgctcccggccgaggagaggctgccgttcttcctgaacctgcacaacgcgatggccatccacgccgtcgtcagggtcggccagccgggggccatcgaccggcggtcctcctccaacttccagtacgtcgtcggcgggcacccgtactcgctggcgacgatcaggaacggcatcctccggtccaaccgccggcagccgtacaccatcgccaagccgttcggctcgtccgacaagaggctcgaggtaattaagcacacgcatgcatgagagacgcctgtgatcaatcaccgattgccatggcgagaggagctgaaaatttttttcgcttgtgcagttggtgcaggggaaggtgaacccgctggtccatttcggcctctgtgacgccacgaggtcgagcccgatcgtgcgcttcttctccacgcagggggtggagccggagctccggcacgcggcgaggaagttcttcctcaacggcggcgtggaaatcgacctcgagagccggacggttcacctcaccagtatcatcaaatggtcagttcattctcataatctcatttcatccccaattggtgcaattttcactgagaagaacaacttattcagaaattcagatttcatcacagctagtttgatcatgagttcagtcaatgtatttgcaacatgaagaattcctgaataaccatccccttgtgcaggtacagtgttgatttcgggcaggacagggaaaccctcaagtggatcctgaactatttggacccgaccaaagctgggctcttgacacacctcctcaacgacggtggggcgatcaacatctcatatctgaactacgattggtccttgaatgtttgaggagaacttgtagttgtagttgtaatggcataatacattcagagccgctgtcatgtgctttctgtttaattggcaaaatggtcaatggaaagaagagcattgagcatagaggcaatcagcatgtggagcttgttgcaagatttgagtctgaggatgtatatagtattgtaagcatgtcaaagtgggttcacagcatagatgaaaaagggaatatgtttgtgaggataaaatgcattagtcatttactattccttctttctgtctaccaaattataccgaaatctcatacgactgatcttgtattcaaatc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0482900, RefSeq:Os10g0482900