Os01g0335700

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Revision as of 04:38, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0335700| Description = Disease resistance protein family protein| Version = NM_001049471.1 GI:115436355 GeneID:4326844| Length = 2882 bp| ...")
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Gene Name

Os01g0335700

Description

Disease resistance protein family protein

Version

NM_001049471.1 GI:115436355 GeneID:4326844

Length

2882 bp

Definition

Oryza sativa Japonica Group Os01g0335700, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:13284719..13287600

Sequence Coding Region

13284845..13286459,13286582..13287444

Expression

GEO Profiles:Os01g0335700

Genome Context

<gbrowseImage1> name=NC_008394:13284719..13287600 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:13284719..13287600 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagatcgcggtgggcgccctgtccggcatggtggacgctctgccggccaagctcggcgacctgctgcagcaggagtacacgctgctgtccggcgcccgcggggacgtcggcttcctccagtccgagctcggcaccatgaacgccgccctcctccggtgcgagtccctcgagagctccgacgtccagacccgggcctgggtcgcccaggtccgcgacctcgcctacgacatcgaggactggatcgacctcttcgcccaccgcgtcgacggcggcgccgccgcctctccgggcgctgcggccgccacctcctcctcctcctcctccggcgggttcctctcctgggtgcgctgctgcgtcaacaaggtcacgacgctccccgcccgccacgtcatcgctaccgagctgcaggagctcaagaaccgggtcatcgagctgagcgagcagcggaagcgctacaggttcgatccgccggcgcgtcacgccggcggccggagcggcgtggcggccgttgaccccaggctggttgcgctctatgctgacactagttccctcgtcggcctggatgcgccggtgaagaaggtgtccgagatggtggtggacgacggcacgactgggctcaaggtggtttccatctccgggatgccgggcgccgggaagacgacgcttgccacggcggtgctccggcgactcaaggaggagaacaagttccattgcagcgctttcgtctccgtcggtcagaagccggacattgtaggtaagacactgaagggcatcctctcccagatcggcaatgggtatgcaggaggcgaagatattggccgattgatcggaatgctgagagatgaattgaaggataagaggtacctcattgtcattgatgatttatggggtagaacagaatggtcaacactcaagtgttgtttccgagatgataatcttggcagtaggataatggtcacaaccagaaatgatgagttggcaaaggaatgttcttccaattcggatgaatcagtttacaaaactggtctccttagtgacgcggactccaaagatttattttccaacaaagcttttgggaaagggaaggattgtcctaaccatttgaaggatctctatgatataatcgtggaaagatgtgggggcttgccgcttgctatatctagcgtagctggcgcactagcacatcgtttttcaaaagatgaatgggagaggtatgaatctaacttgctacctagttcacattccgatgagctgaacttgaagcaaatacttaatctgagttacaacgatctaccttcacatctcaagtcatgtatgttgtatctaagcatattcccaaataaatatgaaattgatgtggagcgcttggtgaggcgatggattgctgaaggattcatcgctgatgcacgccatgcaagcaaagaggagacagcaagaagttaccttactgatctcattagcagaaacctgatccaggcattgcatctgagacataatggcaccccaagctgctacacacttcacccagtaatacatgatttcattgtggtcaagtccatggaagagaactttgtcactgttctagatgctaagaaagaagctctctccaccaacaatggcacagtccggcgactctctcttcaaaacagtgtcaaacaggatcttgctggtgcacgaaatgatatgatcaagcatgctcgctcagtgactgtctttggtcatgccaatggggtgcctcgcctgaatgatatgagcgtattacgtgttctggatctggaaggctgcaatggtccattatgcctcgatggcctctgcaaattgattcttttgaggtacctgaacctcaggggaactgatgtcagcgagctcccagcacaaattggggagcttaggtgcctggagacacttgatgtgagatctacgaaggtgaaagagctacctgccagcattgtcagcttggaaaagctaatgcatttgcttgctggaaatgctaagttgcctggcgagatcagtaagatgaacggcctactaacgttgtcatgcgccaacgtctggaagaacacagggagtgtcttgccagaacttgctgatcttgcaaacttgagggaattggaactgttttgtgatgcttctgaaatctctggtgataataagacacgagtctctttttctagcgacggattcaaaaggcttaagcagctgagcatccagggcagcttgccatcagtggcctttgttaacagttccttgcgaaaggttgaagttcttgagctgaagtacgaaaaaggcatttcagatgggtcaaatggtgtgtctggtatagagcatttgcctagcctgaagcatgtattgattgagttctcgcagaaggatgctggcgccactgcgacaatcgcttctgtgaggaacgccgctgagatggttcaccctaatcatccagatgtctctgtcaaagttgatggaaaggccatctga</cdnaseq>

Protein Sequence

<aaseq>MEIAVGALSGMVDALPAKLGDLLQQEYTLLSGARGDVGFLQSEL GTMNAALLRCESLESSDVQTRAWVAQVRDLAYDIEDWIDLFAHRVDGGAAASPGAAAA TSSSSSSGGFLSWVRCCVNKVTTLPARHVIATELQELKNRVIELSEQRKRYRFDPPAR HAGGRSGVAAVDPRLVALYADTSSLVGLDAPVKKVSEMVVDDGTTGLKVVSISGMPGA GKTTLATAVLRRLKEENKFHCSAFVSVGQKPDIVGKTLKGILSQIGNGYAGGEDIGRL IGMLRDELKDKRYLIVIDDLWGRTEWSTLKCCFRDDNLGSRIMVTTRNDELAKECSSN SDESVYKTGLLSDADSKDLFSNKAFGKGKDCPNHLKDLYDIIVERCGGLPLAISSVAG ALAHRFSKDEWERYESNLLPSSHSDELNLKQILNLSYNDLPSHLKSCMLYLSIFPNKY EIDVERLVRRWIAEGFIADARHASKEETARSYLTDLISRNLIQALHLRHNGTPSCYTL HPVIHDFIVVKSMEENFVTVLDAKKEALSTNNGTVRRLSLQNSVKQDLAGARNDMIKH ARSVTVFGHANGVPRLNDMSVLRVLDLEGCNGPLCLDGLCKLILLRYLNLRGTDVSEL PAQIGELRCLETLDVRSTKVKELPASIVSLEKLMHLLAGNAKLPGEISKMNGLLTLSC ANVWKNTGSVLPELADLANLRELELFCDASEISGDNKTRVSFSSDGFKRLKQLSIQGS LPSVAFVNSSLRKVEVLELKYEKGISDGSNGVSGIEHLPSLKHVLIEFSQKDAGATAT IASVRNAAEMVHPNHPDVSVKVDGKAI</aaseq>

Gene Sequence

<dnaseqindica>1142..2756#157..1019#agcaggttggaggtgtaaagagagaacgaaccatcaggaagaagacttggggacttggttcgaagtccacgcccgcccatcctcgccgtcgctgccgccgccggcgagccgccggaatccagatccagagagagagagccgccgcatccggtcgacatggagatcgcggtgggcgccctgtccggcatggtggacgctctgccggccaagctcggcgacctgctgcagcaggagtacacgctgctgtccggcgcccgcggggacgtcggcttcctccagtccgagctcggcaccatgaacgccgccctcctccggtgcgagtccctcgagagctccgacgtccagacccgggcctgggtcgcccaggtccgcgacctcgcctacgacatcgaggactggatcgacctcttcgcccaccgcgtcgacggcggcgccgccgcctctccgggcgctgcggccgccacctcctcctcctcctcctccggcgggttcctctcctgggtgcgctgctgcgtcaacaaggtcacgacgctccccgcccgccacgtcatcgctaccgagctgcaggagctcaagaaccgggtcatcgagctgagcgagcagcggaagcgctacaggttcgatccgccggcgcgtcacgccggcggccggagcggcgtggcggccgttgaccccaggctggttgcgctctatgctgacactagttccctcgtcggcctggatgcgccggtgaagaaggtgtccgagatggtggtggacgacggcacgactgggctcaaggtggtttccatctccgggatgccgggcgccgggaagacgacgcttgccacggcggtgctccggcgactcaaggaggagaacaagttccattgcagcgctttcgtctccgtcggtcagaagccggacattgtaggtaagacactgaagggcatcctctcccagatcggcaatgggtatgcaggaggcgaagatattggccgattgatcggaatgctgagagatgaattgaaggataagaggtgggcaaaatcaatttgcagcgtttttgcaatgtgacatgcagcttaagagtttagaatcctgtgatgaagatttttggctgctacatttttgcactaatctgttttgttttgctaaacaggtacctcattgtcattgatgatttatggggtagaacagaatggtcaacactcaagtgttgtttccgagatgataatcttggcagtaggataatggtcacaaccagaaatgatgagttggcaaaggaatgttcttccaattcggatgaatcagtttacaaaactggtctccttagtgacgcggactccaaagatttattttccaacaaagcttttgggaaagggaaggattgtcctaaccatttgaaggatctctatgatataatcgtggaaagatgtgggggcttgccgcttgctatatctagcgtagctggcgcactagcacatcgtttttcaaaagatgaatgggagaggtatgaatctaacttgctacctagttcacattccgatgagctgaacttgaagcaaatacttaatctgagttacaacgatctaccttcacatctcaagtcatgtatgttgtatctaagcatattcccaaataaatatgaaattgatgtggagcgcttggtgaggcgatggattgctgaaggattcatcgctgatgcacgccatgcaagcaaagaggagacagcaagaagttaccttactgatctcattagcagaaacctgatccaggcattgcatctgagacataatggcaccccaagctgctacacacttcacccagtaatacatgatttcattgtggtcaagtccatggaagagaactttgtcactgttctagatgctaagaaagaagctctctccaccaacaatggcacagtccggcgactctctcttcaaaacagtgtcaaacaggatcttgctggtgcacgaaatgatatgatcaagcatgctcgctcagtgactgtctttggtcatgccaatggggtgcctcgcctgaatgatatgagcgtattacgtgttctggatctggaaggctgcaatggtccattatgcctcgatggcctctgcaaattgattcttttgaggtacctgaacctcaggggaactgatgtcagcgagctcccagcacaaattggggagcttaggtgcctggagacacttgatgtgagatctacgaaggtgaaagagctacctgccagcattgtcagcttggaaaagctaatgcatttgcttgctggaaatgctaagttgcctggcgagatcagtaagatgaacggcctactaacgttgtcatgcgccaacgtctggaagaacacagggagtgtcttgccagaacttgctgatcttgcaaacttgagggaattggaactgttttgtgatgcttctgaaatctctggtgataataagacacgagtctctttttctagcgacggattcaaaaggcttaagcagctgagcatccagggcagcttgccatcagtggcctttgttaacagttccttgcgaaaggttgaagttcttgagctgaagtacgaaaaaggcatttcagatgggtcaaatggtgtgtctggtatagagcatttgcctagcctgaagcatgtattgattgagttctcgcagaaggatgctggcgccactgcgacaatcgcttctgtgaggaacgccgctgagatggttcaccctaatcatccagatgtctctgtcaaagttgatggaaaggccatctgatacggtctggagtttgtttcagagcaagagggatatagtacacacttgcacggtactttctgccggatttctttgttgtgttgaattgagttttgagttaatgccattctttgtcactctgcttat</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0335700, RefSeq:Os01g0335700

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