Os10g0483000

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Revision as of 08:42, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0483000| Description = Similar to Transcription factor homolog BTF3-like protein| Version = NM_001071418.1 GI:115482579 GeneID:4348929| Len...")
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Gene Name

Os10g0483000

Description

Similar to Transcription factor homolog BTF3-like protein

Version

NM_001071418.1 GI:115482579 GeneID:4348929

Length

2729 bp

Definition

Oryza sativa Japonica Group Os10g0483000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:18697862..18700590

Sequence Coding Region

18698043..18698224,18698448..18698486,18698761..18698817,18698906..18699054,18699577..18699644

Expression

GEO Profiles:Os10g0483000

Genome Context

<gbrowseImage1> name=NC_008403:18697862..18700590 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:18697862..18700590 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaatgttgacaagctcaagaagatggcaggtgctgtgcgcaccggggggaagggtagcgtgcgcagaaagaagaaggcagtccataagactacaaccacagatgacaaaagacttcagagcactctgaaaagagtaggagtaaacaccatccctggcattgaagaggttaacattttcaaggatgatgtggttattcagtttctgaatcctaaagtgcaagcttcaattggtgctaatacatgggttgtcagtggaactccacaaacaaagaagctgcaggatctgctgccatcaattatcaaccaacttggtcctgacaacttggataatctgcggaggcttgcagagcaattccaaaagcaggctcctggtgcttctggtgaagaggctggtgccagtgctggagctgctcagggtgacgatgatgatgttcctgagcttgtccctggtgagacatttgaggaggcagcagaagagaaaaaggaatcatga</cdnaseq>

Protein Sequence

<aaseq>MNVDKLKKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLK RVGVNTIPGIEEVNIFKDDVVIQFLNPKVQASIGANTWVVSGTPQTKKLQDLLPSIIN QLGPDNLDNLRRLAEQFQKQAPGASGEEAGASAGAAQGDDDDVPELVPGETFEEAAEE KKES</aaseq>

Gene Sequence

<dnaseqindica>2367..2548#2105..2143#1774..1830#1537..1685#947..1014#actccccctatcctctcctcccaccgcgccgccgcctccgccgccgccgccgcggctccccctcctccccacagccaaggtgagctactccggcgtcactagctctcccgtcaagtagtatcaagtatgtttttcttcttgcgattttgtttggggttaggagagtgagtggttggatctgtgccttttcggctggtttaggtaggcgagcctctgcaagatttggcctggggcgacgcgtctccggcaatcgttcgaggtggttttcgtgaggggaatcgctatagaaggtaggaatgagtcgattgcgctgtggctgtttggtggatagtgttgatggtttttgctagatttgggtgccgtggcctagggtggcgtggtgcctagtttggtcgttgagtggtttggtgatggtgagatattgaggaactaatatggagatttactgggttgtagtggagttcttagacgaaatgagtgagcgcaacgtggaagctgtttaatgcgaaatggatagttttacagaatgtaatggagtggtcgcaatgagtaatctgcttaatggcaagtcggtagttttacagaatggaatgaacaagtagctttagccaggtagtaagatcagtgataatgtgctagtatctttgaccggtgttgctgcagacatgagcgtttagtaacttgcggtgtttctgttccatccatgtcagctaccttttgtattggcaaattattcattatgctatgtgtttgctttgttgaacctgctgttgttggccttttatggtgcatatgatgggttgtcttgttttgtggtcagaagttctttacttttttttccttttctgttacttattctgttgatatactttttgtaggattgtagctagttaagtttggcttgtctcgtactttactgaaagaactgatctattgtcttatgcagatgaatgttgacaagctcaagaagatggcaggtgctgtgcgcaccggggggaagggtagcgtgcgcaggtgtgtattattattatatttgcaaccagcatacggcatattgatggttacatgtggctgcccattgtgtttgattcatttttctttatgttgggctagtggtgtatatgtttaatgcttttgttgtgcattttgatgcatgtgtagtgatatgcatggtagcactatattctttttgtattacgataagacgaacattaataaatatatatccaattctatatgcttgctatttccttccataaattcatttgctcgctataatttcactctatattaaatatgaggggacttgaggctatttaacttggtaattatctatgggttaaagataagaaacactgttagataacatatgaccactactaatggtttaccgataataatcttgcgggataattgtcatctaagcatgcattgtcagaaaggatgtatattactcactactcactagtcatgatgtttcatactagtgctgttaggattctaattatgatatgataagttttgtgttggtgacagaaagaagaaggcagtccataagactacaaccacagatgacaaaagacttcagagcactctgaaaagagtaggagtaaacaccatccctggcattgaagaggttaacattttcaaggatgatgtggttattcagtttctgaatcctaaaggtgagatcacttgaatactaaaatgcaagttctacacgattagtaatctacttgctttcttatattttatttcttggttttgttccagtgcaagcttcaattggtgctaatacatgggttgtcagtggaactccacaaacaaagagtatgttctccatgccctgtacttcatttctaatgtagcttttatcaataaatcttaaaacaacatttcagcctgtcattttgttctattttcctgtgtagagtagataatagctacccatagtatgtatatgtatgaaagacctaatttggactttccatttctcagagatctttttttgctcaagctaatataatattagctctataaagttgtattattaacttcttgtgtttacataacaataattttatgtttccctttttttgtacagagctgcaggatctgctgccatcaattatcaaccaacttggtatgcctctcgttgcaatttacaatgtttcatgaataatgatccaattagaagtttataataagcaataccaacatttcacctattgttgtcttgatgcttcagcctctgtttatttactaaaatttactgaaatgttgaagcaacttactgggccataacttaccctcatctttgaaagctgttgaagcttcgcttacctttgtttattcctcctattcaggtcctgacaacttggataatctgcggaggcttgcagagcaattccaaaagcaggctcctggtgcttctggtgaagaggctggtgccagtgctggagctgctcagggtgacgatgatgatgttcctgagcttgtccctggtgagacatttgaggaggcagcagaagagaaaaaggaatcatgattttgttgcatgtcttctcctgtgaaggattataagttgcgaattgccattagagacctccgctcttaaaaacctctgacctaccttatttgtgtcagtgctcggttttgtcatgtacgaggatttggtccggtatgttggtggaattttacatcaattaaatgcctcttttggttgcccc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0483000, RefSeq:Os10g0483000