Os01g0338000

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Revision as of 04:38, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0338000| Description = Similar to GTP-binding protein SAR1A| Version = NM_001049477.1 GI:115436367 GeneID:4326797| Length = 2258 bp| Defin...")
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Gene Name

Os01g0338000

Description

Similar to GTP-binding protein SAR1A

Version

NM_001049477.1 GI:115436367 GeneID:4326797

Length

2258 bp

Definition

Oryza sativa Japonica Group Os01g0338000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:13428762..13431019

Sequence Coding Region

13429115..13429243,13429377..13429508,13430484..13430804

Expression

GEO Profiles:Os01g0338000

Genome Context

<gbrowseImage1> name=NC_008394:13428762..13431019 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:13428762..13431019 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttcctgtgggactggttctacggcgtgctcgcgtcgctggggctgtggcagaaggaggccaagatcctcttcctcggcctcgacaacgccggcaagaccaccctcctccacatgctcaaggacgagaggttggtgcagcaccagccgacgcagcacccgacgtcggaggagctcagcatcgggaagatcaagttcaaggccttcgatctcggcggccaccagatcgcccgccgcgtctggaaggactactacgccaaggttgatgctgtggtatatttggtagatgcttatgataaggaacgttttgctgagtcaaaaaaggagcttgatgcactcctatctgatgattcattggcagctgtcccgtttcttatccttggcaacaagattgacattccatatgctgcttctgaagaggagctgcggtatcatctaggccttagcaacttcacaactgggaagggcaaggtcagcctaggtgaatccaatgtccggcccctcgaagtgttcatgtgcagtgttgtccgcaagatgggctatggtgacgggttcaagtgggtctcccagtacatcaagtag</cdnaseq>

Protein Sequence

<aaseq>MFLWDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDER LVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKER FAESKKELDALLSDDSLAAVPFLILGNKIDIPYAASEEELRYHLGLSNFTTGKGKVSL GESNVRPLEVFMCSVVRKMGYGDGFKWVSQYIK</aaseq>

Gene Sequence

<dnaseqindica>354..482#616..747#1723..2043#ctgtttctagttgaggggaagtcgatcgggattaggaggaagccgggcccacatgcaggcgcccacacccacacttcaatcctcacgccccagcagttaatgccttgacgaccctcctcccctctccccaaccaagcatagaataggcggacacacagggtgatagagagagagagattcagatccacccgcgtcttctcttctcccctctcgtccacccatccctcgatcgatccggcgatctccgccgccgccgccgccgccgctagcagcagcaactgcactaggtaaagaggaggagaggagaggagagggcgcgcggtacagaggaggaagaggcgtggggagagaagatgttcctgtgggactggttctacggcgtgctcgcgtcgctggggctgtggcagaaggaggccaagatcctcttcctcggcctcgacaacgccggcaagaccaccctcctccacatgctcaaggacgaggtaccctcctacccttcgcccggatctctctcccctcccccacaaccccagatctgacccgatccatttccctttcgttggatctgatccgtctgtgtttgtgcgtgcgtgcgtgcgtgggcggatggtgcagaggttggtgcagcaccagccgacgcagcacccgacgtcggaggagctcagcatcgggaagatcaagttcaaggccttcgatctcggcggccaccagatcgcccgccgcgtctggaaggactactacgccaaggtctcgcgccaatctcttccaactattccattccattgcatgtttatgtttgcattcggtctctcagatctagtttgttgacggtgataactttctggcttctgtattccattttgtccgtctaattaggaaacgaaatgattttgccatccgtaggctataaggggatatgcgaataattgaattgtgccggtaatggaattcttcaggagccctgcatatgttagcttgaatagttttgtgggtatggtggtagcacaattatggagttgttaaaatcataccagtatctgcgctataattgataaaggtttaattgtctgttttctgcaaaacctcaaagtgcctttgtgttagtgtaaggatgaaggattaaagcataaaggtttagtttaaatactatatcttcattgcacggtattcttttcttcatgggtggtaatcttcattgattcattcctcattattcttttcttcacctgtagcttacagctaatgttacgtaaagttgtaaatttccttttatctcgtgccacttgttagttttgtatctggttaacattgtatgttcatatggttctccgctgaaatgattctctctctgtactatgtgatttacggcacatcttagattttgtgtgatgcattagcaagtctttgcccttgcatggaactgtcaacttgtctgatatgttgtctattctatgattaatatactagctgttcttataatatgattacttgaccaatgaccatgcatgatatatctatgtttagtgcgtggctgttctctcattatttgcacccagatgtaggaatgcatgttttgttgaggatgcctgtgttctgtttcggtgtttcctatgtttcatttgctttgactctgtccttattcttctgatattattaagcttttttccccatctgctaccaccttgtattcttgcttgacttttccctgctgtctcaaaacaggttgatgctgtggtatatttggtagatgcttatgataaggaacgttttgctgagtcaaaaaaggagcttgatgcactcctatctgatgattcattggcagctgtcccgtttcttatccttggcaacaagattgacattccatatgctgcttctgaagaggagctgcggtatcatctaggccttagcaacttcacaactgggaagggcaaggtcagcctaggtgaatccaatgtccggcccctcgaagtgttcatgtgcagtgttgtccgcaagatgggctatggtgacgggttcaagtgggtctcccagtacatcaagtagatcccttgtcaagacatacttgcatactctgcccagcgattttttttccttctcgtttgtttcagttggttgttcttcacgacaacaatcatcatgacggtatggagggtatgaagagaaaacagtgctttaacaattggggacgatgttccatgttggatatttagcctcaaaccatttgttatgtcgagcttctaaaatttttttgcttttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0338000, RefSeq:Os01g0338000