Os01g0339600

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Revision as of 04:38, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0339600| Description = Conserved hypothetical protein| Version = NM_001049482.1 GI:115436377 GeneID:4326804| Length = 3457 bp| Definition ...")
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Gene Name

Os01g0339600

Description

Conserved hypothetical protein

Version

NM_001049482.1 GI:115436377 GeneID:4326804

Length

3457 bp

Definition

Oryza sativa Japonica Group Os01g0339600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:13487617..13491073

Sequence Coding Region

13488780..13488824,13489166..13489213,13489302..13489348,13489778..13489838,13489916..13489963

Expression

GEO Profiles:Os01g0339600

Genome Context

<gbrowseImage1> name=NC_008394:13487617..13491073 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:13487617..13491073 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctcagtttcatgtgccgcacaagtccctctcgttggatatatggcaataagacagatattgttatcagcaagtatgagggtagctttatggtgatggtgacacaaataggatgcatgggaaccatattagctgccaggaaagatgaaagtgttttttctgatccaacctacaatgttctttttggaaagagggatgagccgttactactagcttgtgcacgccaacttatcgaacacataaggtaa</cdnaseq>

Protein Sequence

<aaseq>MLSFMCRTSPSRWIYGNKTDIVISKYEGSFMVMVTQIGCMGTIL AARKDESVFSDPTYNVLFGKRDEPLLLACARQLIEHIR</aaseq>

Gene Sequence

<dnaseqindica>1164..1208#1550..1597#1686..1732#2162..2222#2300..2347#atgtacgtctctacacacgtcatcaccatagaagaagaagaggaggaggacggtgattgatgaagggtgaaagagagaggtagagaggcggcggcgaagcgggcataccatggaggagggcagggtggaattcgaggatcctgatatgctcgaagacgttgttgagggcgccggggagctggctgcggacgagcttgcacctgaggatggcgaagagctccaggtccttggggacgaagtagcagccgacaggcatgccgtgccggttcttgccgtactcgggcaccaccttctccttccccttccacttcccattgttgttgccatcgccgccgccgccgccgcctcctcctagtggttgttctgccatggcgggcgagttagttggtcagagttgtagttaaccaggagaaggagagaggattaattagtcagcgagatagagagagctagccgagccgtgatcagtcgcggcggcggcgctcgcgcgtggcgtggcgtggcgagggctgcatatttgaggggagggcgtgaggcggctgtttgattcgaattcaatttgggggggaaattgaaggggagtaagagtaggaatacggtgcaaatatgatgtaagagaccggctgctatttccaattttggtatgcaacatgacagccagccggagacgacgacggcggcggcgaaggacggagagctcgccgtctgattgagccggtatgaccttcttcctgattttctcgcagagctcccctgattcgaccacctgctcagtcccctccctctagcgacggatttcgccgccgtgaactcgccgacagcttcccctcctcggccgccgccgcgcaggagggggattggtcgagtgtgccaccagcctcacggctcccgacggccatagccccccttctctcttcccacttactttgccccccctaaatttctcttgatttgggaattccgccgggattcctcgaagcagacgctgtgatttagggatttagaagctgcgtggctgttctgtaacttctgtttagtgaagagaagtttatttgggttctcttatgtgttggtgtgtcgatgaccttctttgcggtctctctgattacttgcagtggtgcttgtttcacagatggagatggggatgaattctgtgcagccaaatgctcagtttcatgtgccgcacaagtccctctcgttggatatatgtaagagcctttgctctagtaacttttaagcatatatgatgagtgcattgcatatgattgcgataaaaacaccttcaagaaaacagtctgataaactgttcctggattagaactcaattcaacatgtcatcgcatatcgttagccattgcccgtaagaacaagtttgttctgtcgttggatcagaacatgatctgcattggctatcattgctttgtcgattgttatcactttggcaaattgtcactgtctagtccttgcaagaaccacatctgcattgtttggtgttagttatttcagttctttgcgtgcagctaacttattttccttcttggttttctagggcaataagacagatattgttatcagcaagtatgagggtagctttatggttagttacaccttgcaagtgttatttattcgattggatgacaagttttcacatataaaatatgctcacctaatcataaaatctacaggtgatggtgacacaaataggatgcatgggaaccatattagctgccaggtatgttttttattctcccatataacatggtttattttgggcattgctagttcaggatagacaattctttccatgcttttagtactatcgaaatttgaaacctttagctctcagctttttgctgatgtttctgaaagaacagtgagaatccatccacaattccgcatacatatgttggtgcgtttatcccctagttgcaaaaaggctaggaaactgttgagcatagatttcggagtgcatgtcaggtcataactcataacctcatgatgctacagtttatacaggataatgcttctgttatttcttaaacacgatagatgatagttgacagctagtactttattgatgatgtaccattgtagttgttattatgtgctgtatttcctgtcactttagtatttctgatcatgctttcttgctcattaataggaaagatgaaagtgttttttctgatccaacctacaatgttctttttggaaagagggatgaggtaaggttattatactgttcaatgtagggtctgaccatagatagatctaatgaatgtgcatattgttgtgatcacagccgttactactagcttgtgcacgccaacttatcgaacacataaggtaagattccctcccaccccaccccatatatccgaagaacttcttgtatgatatatgcttgcttctcatgcaactaaaaattaaacttcatgccaatttcgtggataagaaatataattgaaactgtgtctgcatctgcctatgattccattaaattttgaatgtaattttcaccaataagctccacttcttctaagctgctcttggctgagttcgtttgcatgagttcccaactcactctgaccgtttttcgcgcgcacgcttttcaaactactaaatggtgtattttttgcaaaaaatattctatacgaaagttgctttaaaaatcatattgatccatctttcaaaaaagaattagctaatatttaactaatcatgctctaatgaatcgctccgttttttgtgcgggagggatttgctcccaacaagaagtaacaaacacatccttagatgcaaatgtctccagcaatggcccttttaattgtggtcaatgatttttttatctcacgcaactattgtgacacttcggttgctgaagttagttacataatttgtccagctctgatttgtaaactgtcctttggcacctgtaccacactccattttcttacagacacggtcattgatgatatctcttggtctgaaggatcattcccaggtattatttgaacttcccttcatatgactgtaattctccgtgtttttctcctgaatcttgccaaatcagcgagcatggtcgactgtactgtgcatatcagtgtttctgaggttagaccccattattttgcattggaatcaatagtattctcgtgcatgtatctcaaacaattttgttacttctgcaggcaacaatgaaatatattgtttccaccataattgagaaccgcctatagtaatagttttgcatatcgagctggggttggaatggctgggcacatatctattcacttcatcaacagagatgttgacatgattagtgctgagcaattaacactctcttaccaatctagaattttgtaactatgatttcttcggagtcgatgtatcacaaagtagttatataaccaaagttatagcgagaattgcactactagctttgatgagtatttcatct</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0339600, RefSeq:Os01g0339600