Os01g0341200

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Revision as of 04:38, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0341200| Description = Conserved hypothetical protein| Version = NM_001049487.1 GI:115436387 GeneID:4326809| Length = 1559 bp| Definition ...")
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Gene Name

Os01g0341200

Description

Conserved hypothetical protein

Version

NM_001049487.1 GI:115436387 GeneID:4326809

Length

1559 bp

Definition

Oryza sativa Japonica Group Os01g0341200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:13579668..13581226

Sequence Coding Region

13579724..13581142

Expression

GEO Profiles:Os01g0341200

Genome Context

<gbrowseImage1> name=NC_008394:13579668..13581226 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:13579668..13581226 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggccctcgctgactcagcagcggctaggaagctcctcctgcatggcgccgccaccgacgccgccgccgtcggcatgagcttcggcctcgacggcctgtggcagctcatcgccggactcttctccggcctcgtccacctcctcctcctcccgttccaggccatcgcccacggcttccaggccctgggccacgccatccaggcgctcttcgctgggctcgggaccgtggcgcacctgctcgtccaggcggccgtcgccggcattggccatggattcgacggcatgtggcatgccatacagggcttcttcgccagcatcgtcgccgcgctcgccggcgcggcccatgggctcgtcctgccgttcgaggcgttctggcggtggctgcagacggcggcgggcggcaccggctctggtttccaaggattgtggcagaacgtgttggccttcttcgccacgctcgccggcgccgctcacgacctcgtccacccgttcgaggcgttctggaagtggctcaggaccgcggccgccgacgccgccgccgacatcagcttcaggctcgacggcctgtggcccctcgtcaagcgcctctacgccagcctcctcgccacgctcgcgagcgccgcccacgggctcgtcccgctcctcgagtcgctctggcgggggctccgcgccgcggccgccgcggcgctcccctacgtgctagtgatcgccgccgtcctatgcgtcgtcgcgcttgtctggctcgcctggccgttcctgttccccgccgcggcggtgatcgggctggcgctcgtcggcgtcgcgggctgctgcgcgttcttactgctcgccgccgccgtcctgatcgggcgggcgctcgtctacgccgtctgcttcggcgttgtcctcttattcgtcgccgccaaggtggtcggcaaggtgctcgaccgggtcctccccgcctgcgcgcggtgctgctacgacgaccgcgtcaccaccaccgccaccaccatgagcgctccggacgccgccggcatggacatctcgcgagcagcgtacgagtcactcccggagctctacgcccagatactgcgctccgccggccccgtcgtggccgcagccgtcttctgctcgcatcccgtcgcgtgggcgtgcgcggcgccggtcgccgccctcttcctcttccgcgccctggataaacgcctccctccaagcgaaccctgcgtcctccctgcggctgcataccctgacactgtcactgacgtgtcggactcacgttccattggccagcatgtcagcgaagatgatgacatgtccgactcatgttccatagtagacccataccacggcgagcacgtcattctgactatacgccagaggattcacctgcgtatacatgtcgtaaataatgtctgtcccgtgtgtgcgctagcttaa</cdnaseq>

Protein Sequence

<aaseq>MVALADSAAARKLLLHGAATDAAAVGMSFGLDGLWQLIAGLFSG LVHLLLLPFQAIAHGFQALGHAIQALFAGLGTVAHLLVQAAVAGIGHGFDGMWHAIQG FFASIVAALAGAAHGLVLPFEAFWRWLQTAAGGTGSGFQGLWQNVLAFFATLAGAAHD LVHPFEAFWKWLRTAAADAAADISFRLDGLWPLVKRLYASLLATLASAAHGLVPLLES LWRGLRAAAAAALPYVLVIAAVLCVVALVWLAWPFLFPAAAVIGLALVGVAGCCAFLL LAAAVLIGRALVYAVCFGVVLLFVAAKVVGKVLDRVLPACARCCYDDRVTTTATTMSA PDAAGMDISRAAYESLPELYAQILRSAGPVVAAAVFCSHPVAWACAAPVAALFLFRAL DKRLPPSEPCVLPAAAYPDTVTDVSDSRSIGQHVSEDDDMSDSCSIVDPYHGEHVILT IRQRIHLRIHVVNNVCPVCALA</aaseq>

Gene Sequence

<dnaseqindica>85..1503#acttctccaggcctctcagattctcacgaactcacagtagcacttatctctccacagggaggaaggagaagctagctagccgccatggtggccctcgctgactcagcagcggctaggaagctcctcctgcatggcgccgccaccgacgccgccgccgtcggcatgagcttcggcctcgacggcctgtggcagctcatcgccggactcttctccggcctcgtccacctcctcctcctcccgttccaggccatcgcccacggcttccaggccctgggccacgccatccaggcgctcttcgctgggctcgggaccgtggcgcacctgctcgtccaggcggccgtcgccggcattggccatggattcgacggcatgtggcatgccatacagggcttcttcgccagcatcgtcgccgcgctcgccggcgcggcccatgggctcgtcctgccgttcgaggcgttctggcggtggctgcagacggcggcgggcggcaccggctctggtttccaaggattgtggcagaacgtgttggccttcttcgccacgctcgccggcgccgctcacgacctcgtccacccgttcgaggcgttctggaagtggctcaggaccgcggccgccgacgccgccgccgacatcagcttcaggctcgacggcctgtggcccctcgtcaagcgcctctacgccagcctcctcgccacgctcgcgagcgccgcccacgggctcgtcccgctcctcgagtcgctctggcgggggctccgcgccgcggccgccgcggcgctcccctacgtgctagtgatcgccgccgtcctatgcgtcgtcgcgcttgtctggctcgcctggccgttcctgttccccgccgcggcggtgatcgggctggcgctcgtcggcgtcgcgggctgctgcgcgttcttactgctcgccgccgccgtcctgatcgggcgggcgctcgtctacgccgtctgcttcggcgttgtcctcttattcgtcgccgccaaggtggtcggcaaggtgctcgaccgggtcctccccgcctgcgcgcggtgctgctacgacgaccgcgtcaccaccaccgccaccaccatgagcgctccggacgccgccggcatggacatctcgcgagcagcgtacgagtcactcccggagctctacgcccagatactgcgctccgccggccccgtcgtggccgcagccgtcttctgctcgcatcccgtcgcgtgggcgtgcgcggcgccggtcgccgccctcttcctcttccgcgccctggataaacgcctccctccaagcgaaccctgcgtcctccctgcggctgcataccctgacactgtcactgacgtgtcggactcacgttccattggccagcatgtcagcgaagatgatgacatgtccgactcatgttccatagtagacccataccacggcgagcacgtcattctgactatacgccagaggattcacctgcgtatacatgtcgtaaataatgtctgtcccgtgtgtgcgctagcttaacgatggttaatgtaaaccggtgctatcgatcaggtgatcaatgttggtttgttggc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0341200, RefSeq:Os01g0341200