Os01g0342800

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Revision as of 04:38, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0342800| Description = Conserved hypothetical protein| Version = NM_001049491.2 GI:297596703 GeneID:4326486| Length = 8271 bp| Definition ...")
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Gene Name

Os01g0342800

Description

Conserved hypothetical protein

Version

NM_001049491.2 GI:297596703 GeneID:4326486

Length

8271 bp

Definition

Oryza sativa Japonica Group Os01g0342800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:13666131..13674401

Sequence Coding Region

13674008..13674076,13674195..13674386

Expression

GEO Profiles:Os01g0342800

Genome Context

<gbrowseImage1> name=NC_008394:13666131..13674401 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:13666131..13674401 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaacgcggggctgcgcgcgtaccgggaggtgctgcggctggtgcggcggctgccggcggacgcgcggccgtactacgccaagtacgcccgcgagaacttcgtcaactaccgcgacctctccgctgacgacgacctcgccgccctcctccgccgcgcctacgcccactcctcctgggtcctctccaagtactcgatcgacgcggatgctgcggcggggcggctcaaggaggtgtgcggcgccgagggcggagcgtga</cdnaseq>

Protein Sequence

<aaseq>MANAGLRAYREVLRLVRRLPADARPYYAKYARENFVNYRDLSAD DDLAALLRRAYAHSSWVLSKYSIDADAAAGRLKEVCGAEGGA</aaseq>

Gene Sequence

<dnaseqindica>326..394#16..207#aggggaagcgaaactatggcgaacgcggggctgcgcgcgtaccgggaggtgctgcggctggtgcggcggctgccggcggacgcgcggccgtactacgccaagtacgcccgcgagaacttcgtcaactaccgcgacctctccgctgacgacgacctcgccgccctcctccgccgcgcctacgcccactcctcctgggtcctctccaaggtgggtggtagtacggtacctaacctacaaacacgcccgccgcttgagcggagcgcgcgcgctcgctcgccttccaccgcatcggcgtgctggttcaccgctctttgctgccttgcagtactcgatcgacgcggatgctgcggcggggcggctcaaggaggtgtgcggcgccgagggcggagcgtgagcacgcgtgcgcgcgaggtgttcgacgaaatgcttcgccgcgtcatgccagcgtcagttagctctaccccgttgtttttacttgccttgctagcggttggcgggcatttggacttcttgttttttgcaacagtttagttgatagttgataaaaatgtgtggggaataagttgaatactctgcttctgcacaccgtattttagtttgatccctgctgccgcctgcctgtttcagttggtgttgaactcaatttgccgggattagcaaattgcgtgtttaactgtgggataaccaagcaaacacactttgcaaattttgttggtcaaatctagatgttaaattgcctaagagctccaaatgattttgagatagaattacttttgtgaagagtgtgctgtgtgaatacaaaacaaaacaaaacgaactaaaactactggcaaaccatatttcttgtgactagtgagtgtgcacgtgcaaggcacgttgaaatgtaggcgtataggcaattgtcaaagtttctgttgtagaatgtgcacaaaggtcgacttataggcatataggttagttaaagtttctgttgtagatcatgcacaaaggctatgtgaagcattaggaggagcgccaattggtgctgcaagtcccttttgtatctacctcataatcatttgcctcttcaatggcatttttaatgtcatcgaaagtccattgcaatgatcattattagcagtttatctttttttttagcaaagggactgagccctccatttccattaaagaaatgatgtagctaatacaaaggagtcatcccatttaagggttcatgtcttcagaagtgaaaaaaacagaaacacaggtgccagagctctttgctcactacaatcattttgacctgacaaaacaaaagatcttctacttgcaataactcccagaactgaaccagactttagctgaggattccggtccacaaaaaaaactctatcttctgctcttttttgtccatccagcttcatgtgttgtccagcctgcacacgctcgatctccatccatatcttgatttaaagacttcacttgttacctgctttaggagcttggctccccaaagcaactttctttgcctttcctccgaaatctgtaaaataccccaatcggagatccaattacaagcagcaaacaaaatttcagaaggatcagatggcagtttgttattctatcaactccaatcagcagtagctgtgatgtcattctatcacagttttttgttcaattctccaaggtttgatgtaaatttctgattggtttaagatcaaaagcacaacaaaccatattccaggtaaatctagccatagggcaatcaaaaatacaaattctgcaaagtctctttttttctcacagaattgacatgtttctgttccttttttccatcctctctttctcaagttatctttggttaaaatcctattttgcatcatcagccacataaaaatccttatcttaaaaggaattttgattttccagatttttttgtgtatccctattggcctggggattgtgtcatgtgttttcagagctttataaaaagatttaacactaaactctccatttttttgtcaaaatccattttaaggtgtctctccctcctggtaatattaccgtctcacataagttttttatattgatccagtctgcaagtctatctcctgtcaaatttcttctgaaagtaatagactcccaccctttgtttttaacagaagttaaggtcactccatttgcattggtaattctgtatagattaggatatctttcagccagagattgcttccctgtccatttatcctcccaaaccaaagtattacagccattccctaaggatatttcacagaaatgaagttttcttttatctccatcaatccatgccaaaaatgggaatctccctgcttgattttttgtgctgtaagtggtttcttttttagatatttttctcttaacaatttttgccataaagcatcagtattctccaacctccacagccatttccccagaagtgtcttgttcatagtttccaaatccgaaatacccaagccccccatgtctctaggtgaacacactattggccattgcaccaggtgatattttctaatcccctgatcttcctgccaaaggtatcttcttctaaagtaatcaatcttttctagcgccccttttggaattctatagaaagaaaacatatacagaggggtactgctcaagctagagttaattagagtaactcttccaccaatagactgaagtttcccttgccaacacccaactctcttttctattttagcttcagcttgtttccagtccttatttaagattcttttttgatcaatttgcagtaaaaaaatgcgaagagaaggattgcgaagcgctaatcggtgctaatctggcgctaattgcagtgttaatccgacttgtaatttacattgttagattagaggatccaacggttagaaacttctgggtacacttttctgggtggatgtaggaaagaaacaactggtactttttatattagtatagatgactttagccattggttgctggagcggacacaaaacgtagaacgggatttgagattagcattcacatcaatgaaagggcaccatcatggaaacctgaaaacaaactgaaacctctcatgcttactcggaaatctaaattgatcaaactcaaaatcaaagtaaattcaggaagacacaatgctgtcacaattcatcaaagatgtgtttcagcaaaaagaaccaagcgaaaagagaggagttgcatagaatgctatttaacagatcacacaatttaaccaaaaaggctctccagtggagatctgtgtagattgaatgaacaaaaaaatctgcatttatttaattgtcaaatacagcagcatttcttgagatgaagttattgcctctgctctgcctagtatgagctggttacaacttacaaggaacttgttacattttctatgtaccgaatgaaaataaactctatatatgagactacaccatcttctacgactacatctaagaatggcatcttcttcatctcctctggaagttgaacttcatgattgcaaaactgaacaggaaagcgaacatcacagtgaaaacaacatgcacaacggcaacaagccatagtaagtcatgatggaaaccatagtattccgtaatgaactgagccacggtttggtctttgccatcaagtttagtttggatatttccaaactgggaggcaaccaatccatacaatgtccatgcaacagggcaaatccaacagtaccacctccaccagacaggaattttctgaatttgcgagagttaaatgcatgagtcacattagaacaatatggtaatgaaatctaaatgaaaacaaaaccatacgcggcaggaaagtaacctacaggtcgaggtataagatatcctgagaagaggttccatgcattgtagattgctggtgaaatgatagctgcaatgctctcgtttggtgtcaatcctactgccatcattccgaagaacgtgaaatacagcaatgtgaagtacatgaagaacaggtaccaaatgaacttagcaacagtccattcaaacccaatcattgagtagactagtacaccatataccagtgtctgaactaggatgtatggcaattcgatcgcaacctacaaaagagacaaggaagtgaagttagggttggagcccaaaagaacttatgacttttaagttttatgaacagtagtgaatagttcttttcattgaactacaagcttcagtttgatttcaaaggcattgtatttcttcatccattactaagatgaattataaaggaaagaatcaattttatgcctctactctacggagtaaaaataaactttcacttaaccttcaaaattgaatcagaataacccaatatccaccctaaaaaaaaagaagaataacccaatatctaatacaatggtggtttcagccttattccatctacaaggtcaggtaattcttaactgttactgcaagaacataatacaggaaaatctgttctatctccctcttgtttctcttcaatttgctgacatccaagcaattggtggtcttgttggtcatccattggaagttggaacaacattgctgttacggagcacttatgttccgatgcttctagtctgtcctgtggaactctatgatgagatcctctagaagatttgaaactttgagtcaacctttggttgctttcttccttcattcttgattaattgctgtatttctaattgttgtttttcataagatactaagatgtattgccatatcgatgttttagggaaatggtgtattatggtagcgtgtctaggcaacatatcatattttgaaagttcaggtatacaacttggatgatttcatagttcaaagtgaaatttggactccataaagagttgagggataataaaatagatttattccaattagaaatcacctgtccaaatgcatacgggaaacctgaatacatgccggcagctctttctcggtaaaagactgttctctccaccaccactacaggttgaacacaaccagaattttgtatcccaatgtaaagaactgcagcatacattgatcccacagcattgaatagatcctgttctttttttctgccatggtatgagtaaggtatcataatatatcacatgcaaagtaggttctatcaatcagaaagataggagaataaacttagaagatgtacgttttccttccgaggtcccaaaacattgttccaaacagtagtgcaatgatgatggtgaagagtaacctcactgctgtgtaggatggattcctccaatatgataacttgtgcttccacaagcaagctatgcattgtgtgaagaacgacctagagtactgtgtagggaaatggagatcagtagaaccaggagtaggtgtgcttaggtcttgtataagttccttgttccttctgaaattgtgaaaaggggcaaatttattatgttgtcacccaatcaggaattacatgttgcactatatactacagttcactaaaacagcatgaaaggagacaaactgatatagttctgatcgtttgtagatttcactgaaatcaatcccaagcatctcctcttgtgtagtagaggttacttccaacatccatgttgctggattgtagccatcttttatcttactaatgccttcaattccctgaacagatcaaataaaaagtatccacctttatatagttttgctggcactaagttctacaacctgcaatgaataatactttattttactaatcttcttacctcaaagtactcaatcagttttgaggaattctggcccaatggaccaacatatatctcttctcctcctcttttcattaggaaaagctgtaagtcatacataaatgataacattgtcaatatgtgaacttatcttaataaatctaaggacctttatccatattgacaataaagaattgtccacctcatcaaatgcttcaaatatgtcaatacttggctggtgaattgtgcaaacaacagtcctaccagtgtcaacggtcttccttacggtcctcatcacaattgcagcggcccgagcatcaagaccagatgtaggctcatccataaaaatgatcgaagggttagcaacaagctccacagcaacagttagcctcttccgttgctcagttgacaagccattcactccaggaagcccaacgagtgcacccctcagtgatgtgagctctacaagctccatgacctcctctatgaacatctgttatcataattcagtaaaaaaatcagtcaaaaaccacgaatttcaaagcctgctcatttgcctatttaaattaatcaatacctacaacccagctaacctttcttgtttctgaatcaacctctgaaggaagccgcatccaagcagaaaatacgagtgactcataaactgttacatgtggagaatgaatatcattttgttcacagtatcctgatatacgcgcaaaggtctcttgtttctttggatagcctgagatggtgatgtctccctctatgtatcctccagttttcctccctgctaatacatccatcagagtagtctttccagcaccactcacacccatcagtgcggtaagtactcctggcctaaacgaaccactaacaccctttaaaagtaacaagcgctcttctgttactccttgtgctgtcattgcctgtaagtgttgaacagtactattgggtaaggcatcttgggtatgcaagtatgtagctgtaaaaatgttgcaatgcatagttcactgaaaatttttacctcaggcatgtccactgagtattttatgtcattaaaactaagtgacagttgtgcaaaggggagtattccctgcctgatctgactagattctgcagtgttattccaatgcttttggttgacactttgggactgttccttctttctagatttcttttcctcacagctatctagaatttcaccagtttggttggcacgcttttccttcagtgcatcttcaggcactgatgggtaagagtcaccaagtgctgcgaaaagttagcaaagcagtcacagtgagcatcaactgttaacccacaaaatgctgttttgctaaattcttggaattatatccatataaaaacagtctcatcaatccacttacgtttcaaaaatgaaagtgccacagtgtaaaggaggttgaacaagagtgtatatccaatcaaagcaccaaacccaatccaataccacttagcttcagtaaatatgcctcgagatttcagaatgcttattccgacagtgtcattttgtccaggaaaactctacaacatgggaatacaataagttgatttttctttcacatttttctaagtgactaatgcgatctttacttactttgttccaactgcgccctagaaattcgtttgttgaaatagcattctgtgcatacgataagggagaaatccagtaaccccaaatccaccatttcttcacatcagctggaaaggcaaagaaagattgagatggaaattagtcaggaacagttaagggttagcaccgtcaatacgatttaagaataaatatcattttaattttataattgcatattgagtaacttacgtcttgcaagaataaagccacccagtgctgtgaaagccaacaatgataagggtccgaaggtttgagacacaaccatgtctctaccgatgccagcaataaatcgaaacagtgaagatgacatctgattaagtgcaacaagtagcagatactgcttaaagaacctgagaaagatataaattattcagatttcacagaacaaaatcagtactatgtgaacattctgcttaatttctttctaccagcatacagtacagataaaagagttatctcttttatgcattcttaggacatgaaagtatgtgctgcactgtcttacctgctcacattgggatcaaagccaacaacatagtatgttgtgaaaacataaactccaacctcaaaaaatgtgacggggatctgaagaatccatgatggtatggtgtaggtccatgcagggaagaatagaagatccctctgcttgaagaagacaggaagcttcatgacagtcatgccaagctccgcgaacccattgaacatgattgtgtcaagggcaaagtacagagcccccatatagatcgttccataagttgtatcatggcgcattttggtacgaagaaacgtggtcattacgaggaacgcggtaagagttaactgtgatgatgtaaaattcagattggtgtcaggtaatcttcatctcaatattaaaaagaagaccaagccataggtctgaacttacattggcagctttaaa</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0342800, RefSeq:Os01g0342800