Os01g0342900

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Revision as of 04:38, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0342900| Description = Similar to Adenosine monophosphate binding protein 1 AMPBP1| Version = NM_001049492.1 GI:115436397 GeneID:4326487| L...")
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Gene Name

Os01g0342900

Description

Similar to Adenosine monophosphate binding protein 1 AMPBP1

Version

NM_001049492.1 GI:115436397 GeneID:4326487

Length

2150 bp

Definition

Oryza sativa Japonica Group Os01g0342900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:13682431..13684580

Sequence Coding Region

13682502..13682720,13682847..13684421

Expression

GEO Profiles:Os01g0342900

Genome Context

<gbrowseImage1> name=NC_008394:13682431..13684580 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:13682431..13684580 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagggcacggtgctctgctccgccaaccacgcgccgctcacgcccatcagcttcctcgagcgcaccgcgctcgtgtaccccgaccgtctcgctattgtcgcctcggatggcagcgccggcgtggccgtgtcgcgcacctggcgggacactcgggcccgctgcctccgcctcgccgccgccctcaccggcctcctcggcgtccagcgccacgacgtggttgcggtgttcgcgcagaacattcctgctgtttgcgagctccacttcggcgtccccatggccggcgccgtcatctgcacgctcaactcgcgcctcgacgccgccatggcggccgtcctgctgcgccactccgaggccaaggtcgtcttcgtcgaccgcgctctgctcggcgtcgcccagaaagccctcgtgctcgtcgccgaagccggagccaggcgtcccgtcttggttctcatcagcgagctcctcgacgaaaacgaacgatcacctcctgatgccaagatcaaggtcacccgagtcgattacgagtacgagcacctcctgagcgccgccgccgccggatcgtcgccggacttcgcgatccggtggccggccgacgagaacgagccgatcgccctgaactacacctccgggacgacgtcgaggcccaagggcgtgatctacagccaccgcggcgcgtacctgagcagcctcgccgccgtgatcgtgaacgccatggcggagacgccggtgtacctgtggaccgtgccgatgttccactgcaacgggtggtgccaggtgtggggcgtggcggcgcagggcggcacgaacgtgtgcgtccgcagggtgaccgcggcggccatcttcgacagcgtggcgcggcacggcgtgacgcacatgggcggcgcgccgacggtgctgagcatgatcgtgaacgcgacggcggacgagcggcggcggcagccgggcgggaggaggaggagggtgacggtgatgaccggcggcgcgccgccgccgccgcaggtgctgttccggatggaggagcaggggttcctggtgatccactcgtacgggctgacggagacgtacgggccggcgacggtgtgcacgtggaagccggagtgggacgcgctgacggcggaggagcgcgcccggatcaagtcgcggcaggggctccaccacgtcgggctggaggcggcggacgtgaaggacccggcgacgatgcggagcgtgccggcggacgggcggacggtcggggaggtgatgctccgggggaacacggtgatgagcgggtactacaaggacggcggcgcgacggcggaggcgctcgccggcgggtggctccggtcgggcgacctggcggtgcgggaggaggacgggtacatcaagatcctggaccggtccaaggacatcatcatctccggcggggagaacatcagcacggtcgaggtggaggcggcgctgttcgggcacccggcggtggaggaggcggcggtggtggggcggccggacgagtactggggcgagacgccgtgcgcgttcgtgaagctgagaggaggaggaggaggaggaggaggcggcgcggcggtggaggaggagctgatggcgttctgccgcgcgcggctgccgcgatacatggcgccgcggacggtggtggtggtggaggaggagcttccgaagacggcgacggggaaggtgcagaaggtggcgctgcgggagcgggccaaggccatgggcagcctccccgccgccgcctcttcctcctccaggcgcgcacccacagggacagctgggtctgggagaagcaagctctga</cdnaseq>

Protein Sequence

<aaseq>MEGTVLCSANHAPLTPISFLERTALVYPDRLAIVASDGSAGVAV SRTWRDTRARCLRLAAALTGLLGVQRHDVVAVFAQNIPAVCELHFGVPMAGAVICTLN SRLDAAMAAVLLRHSEAKVVFVDRALLGVAQKALVLVAEAGARRPVLVLISELLDENE RSPPDAKIKVTRVDYEYEHLLSAAAAGSSPDFAIRWPADENEPIALNYTSGTTSRPKG VIYSHRGAYLSSLAAVIVNAMAETPVYLWTVPMFHCNGWCQVWGVAAQGGTNVCVRRV TAAAIFDSVARHGVTHMGGAPTVLSMIVNATADERRRQPGGRRRRVTVMTGGAPPPPQ VLFRMEEQGFLVIHSYGLTETYGPATVCTWKPEWDALTAEERARIKSRQGLHHVGLEA ADVKDPATMRSVPADGRTVGEVMLRGNTVMSGYYKDGGATAEALAGGWLRSGDLAVRE EDGYIKILDRSKDIIISGGENISTVEVEAALFGHPAVEEAAVVGRPDEYWGETPCAFV KLRGGGGGGGGGAAVEEELMAFCRARLPRYMAPRTVVVVEEELPKTATGKVQKVALRE RAKAMGSLPAAASSSSRRAPTGTAGSGRSKL</aaseq>

Gene Sequence

<dnaseqindica>72..290#417..1991#ctctcgagctccagactccagtagcagcagcagcagctctcctcctctccactgctagttcgacgatatcgatggagggcacggtgctctgctccgccaaccacgcgccgctcacgcccatcagcttcctcgagcgcaccgcgctcgtgtaccccgaccgtctcgctattgtcgcctcggatggcagcgccggcgtggccgtgtcgcgcacctggcgggacactcgggcccgctgcctccgcctcgccgccgccctcaccggcctcctcggcgtccagcgccacgacgtggtacgtatgaacaggcgccacgccactgtaacagtaacattaatttcacccctcaaaatcgctgtgaattcgcatgccaaatgctgtaatttaatcgcggtgattcacattttggttcatgcgcaggttgcggtgttcgcgcagaacattcctgctgtttgcgagctccacttcggcgtccccatggccggcgccgtcatctgcacgctcaactcgcgcctcgacgccgccatggcggccgtcctgctgcgccactccgaggccaaggtcgtcttcgtcgaccgcgctctgctcggcgtcgcccagaaagccctcgtgctcgtcgccgaagccggagccaggcgtcccgtcttggttctcatcagcgagctcctcgacgaaaacgaacgatcacctcctgatgccaagatcaaggtcacccgagtcgattacgagtacgagcacctcctgagcgccgccgccgccggatcgtcgccggacttcgcgatccggtggccggccgacgagaacgagccgatcgccctgaactacacctccgggacgacgtcgaggcccaagggcgtgatctacagccaccgcggcgcgtacctgagcagcctcgccgccgtgatcgtgaacgccatggcggagacgccggtgtacctgtggaccgtgccgatgttccactgcaacgggtggtgccaggtgtggggcgtggcggcgcagggcggcacgaacgtgtgcgtccgcagggtgaccgcggcggccatcttcgacagcgtggcgcggcacggcgtgacgcacatgggcggcgcgccgacggtgctgagcatgatcgtgaacgcgacggcggacgagcggcggcggcagccgggcgggaggaggaggagggtgacggtgatgaccggcggcgcgccgccgccgccgcaggtgctgttccggatggaggagcaggggttcctggtgatccactcgtacgggctgacggagacgtacgggccggcgacggtgtgcacgtggaagccggagtgggacgcgctgacggcggaggagcgcgcccggatcaagtcgcggcaggggctccaccacgtcgggctggaggcggcggacgtgaaggacccggcgacgatgcggagcgtgccggcggacgggcggacggtcggggaggtgatgctccgggggaacacggtgatgagcgggtactacaaggacggcggcgcgacggcggaggcgctcgccggcgggtggctccggtcgggcgacctggcggtgcgggaggaggacgggtacatcaagatcctggaccggtccaaggacatcatcatctccggcggggagaacatcagcacggtcgaggtggaggcggcgctgttcgggcacccggcggtggaggaggcggcggtggtggggcggccggacgagtactggggcgagacgccgtgcgcgttcgtgaagctgagaggaggaggaggaggaggaggaggcggcgcggcggtggaggaggagctgatggcgttctgccgcgcgcggctgccgcgatacatggcgccgcggacggtggtggtggtggaggaggagcttccgaagacggcgacggggaaggtgcagaaggtggcgctgcgggagcgggccaaggccatgggcagcctccccgccgccgcctcttcctcctccaggcgcgcacccacagggacagctgggtctgggagaagcaagctctgaaccgagtttctcaatcgtaactgctgctgcgagaatgcgactacgatgttgcaaccagttaacgcaatattggcagtcgattctaatcagggtggatgtacatccatttattacatgacaaataaataattatgaaaaaatttgtcatatattattgac</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0342900, RefSeq:Os01g0342900