Os01g0343100

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Revision as of 04:38, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0343100| Description = Protein of unknown function DUF594 family protein| Version = NM_001185392.1 GI:297719918 GeneID:9269304| Length = 66...")
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Gene Name

Os01g0343100

Description

Protein of unknown function DUF594 family protein

Version

NM_001185392.1 GI:297719918 GeneID:9269304

Length

6613 bp

Definition

Oryza sativa Japonica Group Os01g0343100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:13693031..13699643

Sequence Coding Region

13693159..13693177,13697285..13699479

Expression

GEO Profiles:Os01g0343100

Genome Context

<gbrowseImage1> name=NC_008394:13693031..13699643 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:13693031..13699643 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgactccatccatcggtgctatgagatacgaaatggagaaatatgtgcctgtgctcttgagcttcgcaatgcaagtggtcctattctttgcgggtagatttcacgtgcacatcactgacaagttcaccagggtcttaatctcatcaacttatctaggggcagatatcatagcaatctatgccctcggtggcctctcacgacaagagggtaacccccaatcaattgctttcttttgggcgccatttcttcttattcatcttggtgggcaggacacgattactgcttttaaaatggaggacaagaatgcatggttgacacgttcagggaaacttctgttctatgctgttctggctgtttttgttttcttcaattctattggaagacacaaggagcttctacttgcaggaatatttatgtttgctactggatttatcaagtatttcactaggtcatggtctctcaagtgggggagctttgaaagcattgagaactccactattcgacacatgtatgagatacaattgccagaagcgagcaacgggtcgaatatgacctattacgattatgttctcactgctttaaattccatgttacaaatccatgatatctttgctgcacgcagtctcaggtctactgctaactctgagagtgaagatgaagaaatagtagaatcggaagaagctgctagatccgtgagagaagatgaagaagcagtagaattggagaaagccactaggtctgtggatatagatcaagaaatagtagagcagaaggaatataaaatattaattaaagatgatgaagtagtagaaccgaaggaaaataaaatctcaactgagaatgatgaagctatacaatccacaggaaataacacaccaattgaaggtgatgaagaagtacaattggagggagatgaaatatcaatcgaaaatagaaaagcagaattggagaaaattataattgaaactataataaagcccgaattaagtttggtgcagcttcagctcggcatgatgtatgatgacctctacacaaaggcacttcttcttagaaaaaagggaggtattgcacttcgattcattgctatatctacctcaattgttgcttttgccctctttctttcaacagagaaacggcggtatagtaaagttgatattgcggtcaccatgtcactattcattggagaacttctccttgaagtttgcgcagtgcttattttcatgatgtctccatggacgtgggcatggttgaaggttcgaaagtacaactggcttgcctgtttttcatggtatcttttttccagtcgcattggatggccagagaataggccacggtggtctaattcaatgggacagtacaattgcgtgaacaggttggtaggcatcagcccgccaacatcatgcacacccaaaattatgacctatttgagaaacatagcaaacaaagttggtgctaaggagatatcttggataaacaagctgatacacactgggtatgtcaagacggatagagatactatggaacgagttgtgtttggcctttatggcttaatgaatgaagtcgatggtcaggatacagaatacctagaatggagatatgttggctcattcctggaacagatacaagatgttctcaccgcagactttggtactgctcttctcatgatgcatatggtcacagaggttttcctcaggcaataccctgggaatcattccttggtggatgtctgcagaaaactgtcaaactatatgatatatcttttggttaaccacccttccatgcttccactcaataccagtgcaatatcctcgattaaaactgcggaacgtatgttccagaggaggactaatgacatctctgatgttgagcattacaaaaatatccatgactcgttactagtgggtgaccagcctgaaggagatggggtacttgacgagctggtcgaaatgtgggtgagagtcctcctctattccgccggcaagtcaagggcggagcttcacgtggaacaactggccagtggaggggagctcatcacctttgcttggttactcatggccaaaaatgactgcggtgactccaggatgaaaaggattcaaatcacaaattttagtcctcgtgatgaatctgacgattgctatgatctccctatgaaggaaggccacgctttccatatcgtccatcgtagtgaagtcgatattcagcgtgattga</cdnaseq>

Protein Sequence

<aaseq>MTTPSIGAMRYEMEKYVPVLLSFAMQVVLFFAGRFHVHITDKFT RVLISSTYLGADIIAIYALGGLSRQEGNPQSIAFFWAPFLLIHLGGQDTITAFKMEDK NAWLTRSGKLLFYAVLAVFVFFNSIGRHKELLLAGIFMFATGFIKYFTRSWSLKWGSF ESIENSTIRHMYEIQLPEASNGSNMTYYDYVLTALNSMLQIHDIFAARSLRSTANSES EDEEIVESEEAARSVREDEEAVELEKATRSVDIDQEIVEQKEYKILIKDDEVVEPKEN KISTENDEAIQSTGNNTPIEGDEEVQLEGDEISIENRKAELEKIIIETIIKPELSLVQ LQLGMMYDDLYTKALLLRKKGGIALRFIAISTSIVAFALFLSTEKRRYSKVDIAVTMS LFIGELLLEVCAVLIFMMSPWTWAWLKVRKYNWLACFSWYLFSSRIGWPENRPRWSNS MGQYNCVNRLVGISPPTSCTPKIMTYLRNIANKVGAKEISWINKLIHTGYVKTDRDTM ERVVFGLYGLMNEVDGQDTEYLEWRYVGSFLEQIQDVLTADFGTALLMMHMVTEVFLR QYPGNHSLVDVCRKLSNYMIYLLVNHPSMLPLNTSAISSIKTAERMFQRRTNDISDVE HYKNIHDSLLVGDQPEGDGVLDELVEMWVRVLLYSAGKSRAELHVEQLASGGELITFA WLLMAKNDCGDSRMKRIQITNFSPRDESDDCYDLPMKEGHAFHIVHRSEVDIQRD</aaseq>

Gene Sequence

<dnaseqindica>129..147#4255..6449#agtagcaagttgcatatgcctgcctgcgttcttctatttaaggtgaagccagacaggcaagaggcaggtccgggaacatatgcaagaggaggctcaggaagcagcaagtttgcacatccaggtccaacatgacgactccatccatcggtaagtatatgtgtgtgttttctttatccccataaacagtttttcctcagtaacaaatgctcgtcggtttgagatatgactccaattaaactttatattttaaatatttggtccagactagtatgcatcacatcgaattttaattttagtagcgaaatgcccatattttgctatggataaaataatatataataatatggcatagataattattgttttatcaagtatgctattattgtttgtttgctcatttgaatatatagtatttacttgaaacaaatattagattattgtataatatcataaaatatgatggactaatttagaaaatttgctaaagtagtggtagagaggttattataaccaccaccacttgttgtattttatagtagtatatatagataggactatcaccggcatagaaaggccaatctctaccgtttcaaaaactggcatctagaccaccagtgttactcattttggggacaaagtaaaatagatggttacatcaacatgttactccaatctataatacaatttcaatccagatatcaaattacataaagatcaactcacaacagtaaactaaacaatcttacaataaaatcttgagatcaagttgatttaaaaagcacaaacattcacttcatgccatcggccccaccagcctcaggtacaattgatccgtcggccgctagctttcctgatgcccaatccgttggcctttgcctcgcaatgtcagatctgtcagccatcctaagttgccgccgtcatcaccctccctatctcacttcctccccagcacgctagaggcggcatcgtgggacggtggggatcccatccgcaaaccaggctctagggttgttggataagggcgtttacagtgcgttgagttaacgttggcattcagttgcatcattcccctaacgaatattccgtgccacgttcgcttctaccacatctacctaaaatccctgtatccaactttgatcactcgttcttcagccaaatcctaggtgagtagcgtggggagagagccccgtggaggtcctgacccctgctcagcttgcacacgtgtatcttgctttttttccttgagtcacggcatggggtccgaacggcactatgaatcctatcttactataaagttataacctactaattctaaagctcaacatgcaaacataccacctcatcatccactagcaataattatataaaaacttatgcaagcatgcaatatcatatataattcattctacaaatcaacatccaatcatttttttcacattattttttacaatatttttaacatatatatccatcatttttataatacttaacataaattcatcaatataatcaaagtgcgggatatcatatttcatctacaatctgatacagagtctattaaatttatttctctctgaatatatatagtttgacaaactatttttatttgttgtaaataactaatataatttacttttagcttgaatattaaaaaaaatattaaaagtcacttagtaattctccttctcctcctagtggtctaggatccggtgccaccaaatccgtcagctgatgccaccctccagcacgataggaggaggacaatggtgcagctgggtatggaggcagcagcggcatggctaggagaggcggtgacgtgggtagggttgttgaggatgaggaagagttgcagtcggtcatggggacttacaattttctcgtgtgggattgcctttaatacggttggccagctaactttattgccgggtcataaaagataaaaactgatatttaaggatttagggcctgtttaaatccctggtaaaatttttcaccctattatatcgaatgtttggcacatgcatagagtattaaatatagaaaaaaacctaattagacagtggcgtgtaaattgcgaggcgaatcttttaaacctaattattccatgatctgacattaatgtggtgctacagtaaaaatttgcaaataacggattaattaggcttaataaattcgtctcgcagtttataggtggaatctattattagtctacgcttaatacttcaaatatgtgtccgtatacccgatgtgacacgctaaaacttttcacccctgatctaaacacagtcttaatcatatataaaattaaggcactacaaacatcacacaaattgctatttaaacccattcatacatagaagatctcttctctggtaacctagctaccatcggtacaaccaccaagtctgttcgtatcgtctgcctttgaggcaaacggcaaaatttgccgttgataacatccaaagcgttcatcactcaatcaaccgtaaccgttgcatgtttaggctcacctcatagactaattaacagacaactaattaatagaatctgatgtgctaataaatcactttaacaacccactaatggatataatcaacttagccattttttcctgtattcacagtaaacaaaacagaaattctcatacaactaaacattttttctgcataccactatgtccattttttatccattattttagacgcttgcacaatcttcaataaacatgtttcaccatttatattttctaaataaattagaaaagataaatgatgaaacacgtttattgaagactatgcaaacgttcacgtcaaaaaaatattcattcaattacactcatctgtataaatttataggctagtgtaagataatgacatctaaaatttatagtcaatgcaatataaactcacttgtaattacaaaatcttctaagaattttactataaaaaggtaattaacgacataataaaataaattattatcttagtttagaggccagataaataaaatcaaagtaagatatttattaatctccatgaacttcatcaatcatgtcaagaataagacgcaatcagtaagctaaacatcttgaattcaacctcaaatttcagccatccaactatattataaaaatatgcatgggacgacattgtttcacttggcggaagagtggatcagtcatttgagctggtatggatggcaacagatgaactagacaacatctatggacggtccgtgggttagaggcgttcaatatataaaagatggtaaccaggaaggctcctgagtggtcgtggggctaaggtcgccagcagcatggatttgatcccaagggatggcacctagtggaatttccactctaaagcaagaagtacgataggttaggaggtagatggaggcaggcggtgttgtagattcatgggaggaagggatgccatggcaatggtctatgcagatggagaaaggagcattgtagagaatcaagagcacacaagtgggtgggaaacagaggtaatggcttagagagagaaagagaggggggagaggagatatgatggatcagagagaggaaagtgcatgagttagggctttgtgttgagagatgtttataaattagatggagacccaccatttcatgttttatccaagtgttctaacgatgacttatttagagaaaatccatgaggtgatctatatttcttatataagagaaccattgacatcctgacctcagtatcaaggacgaatgtccatagataaaaaaaaatccaggttatcaatctatttggcactttgtctatttccttccaactttctctagatacccttgttaattacctaatgtggtgggtatattatttgtattttgtaagataaaatacttttactggtagtgactacattcgtgtacataaggctaaaacataatatatatatatatatatatatatttgaaccaaatagtatatgatcgactagataattcgctatgttgtccaagagtaactttacggtgatacagtattctataccaatattattataaggagatattaactgttgatttatgaagtctactaccacagtacaaaaattaatctactatatgagtggtttggtagtataaataaatatgaagatttggattataaaggatgaatggtatggattgattgtactgccatttataaagcattgcttcttccaattgccgaagtcacactgaatgatattgtatgctattctaatcaacaggtgctatgagatacgaaatggagaaatatgtgcctgtgctcttgagcttcgcaatgcaagtggtcctattctttgcgggtagatttcacgtgcacatcactgacaagttcaccagggtcttaatctcatcaacttatctaggggcagatatcatagcaatctatgccctcggtggcctctcacgacaagagggtaacccccaatcaattgctttcttttgggcgccatttcttcttattcatcttggtgggcaggacacgattactgcttttaaaatggaggacaagaatgcatggttgacacgttcagggaaacttctgttctatgctgttctggctgtttttgttttcttcaattctattggaagacacaaggagcttctacttgcaggaatatttatgtttgctactggatttatcaagtatttcactaggtcatggtctctcaagtgggggagctttgaaagcattgagaactccactattcgacacatgtatgagatacaattgccagaagcgagcaacgggtcgaatatgacctattacgattatgttctcactgctttaaattccatgttacaaatccatgatatctttgctgcacgcagtctcaggtctactgctaactctgagagtgaagatgaagaaatagtagaatcggaagaagctgctagatccgtgagagaagatgaagaagcagtagaattggagaaagccactaggtctgtggatatagatcaagaaatagtagagcagaaggaatataaaatattaattaaagatgatgaagtagtagaaccgaaggaaaataaaatctcaactgagaatgatgaagctatacaatccacaggaaataacacaccaattgaaggtgatgaagaagtacaattggagggagatgaaatatcaatcgaaaatagaaaagcagaattggagaaaattataattgaaactataataaagcccgaattaagtttggtgcagcttcagctcggcatgatgtatgatgacctctacacaaaggcacttcttcttagaaaaaagggaggtattgcacttcgattcattgctatatctacctcaattgttgcttttgccctctttctttcaacagagaaacggcggtatagtaaagttgatattgcggtcaccatgtcactattcattggagaacttctccttgaagtttgcgcagtgcttattttcatgatgtctccatggacgtgggcatggttgaaggttcgaaagtacaactggcttgcctgtttttcatggtatcttttttccagtcgcattggatggccagagaataggccacggtggtctaattcaatgggacagtacaattgcgtgaacaggttggtaggcatcagcccgccaacatcatgcacacccaaaattatgacctatttgagaaacatagcaaacaaagttggtgctaaggagatatcttggataaacaagctgatacacactgggtatgtcaagacggatagagatactatggaacgagttgtgtttggcctttatggcttaatgaatgaagtcgatggtcaggatacagaatacctagaatggagatatgttggctcattcctggaacagatacaagatgttctcaccgcagactttggtactgctcttctcatgatgcatatggtcacagaggttttcctcaggcaataccctgggaatcattccttggtggatgtctgcagaaaactgtcaaactatatgatatatcttttggttaaccacccttccatgcttccactcaataccagtgcaatatcctcgattaaaactgcggaacgtatgttccagaggaggactaatgacatctctgatgttgagcattacaaaaatatccatgactcgttactagtgggtgaccagcctgaaggagatggggtacttgacgagctggtcgaaatgtgggtgagagtcctcctctattccgccggcaagtcaagggcggagcttcacgtggaacaactggccagtggaggggagctcatcacctttgcttggttactcatggccaaaaatgactgcggtgactccaggatgaaaaggattcaaatcacaaattttagtcctcgtgatgaatctgacgattgctatgatctccctatgaaggaaggccacgctttccatatcgtccatcgtagtgaagtcgatattcagcgtgattgatgttgttttgttgattaactagtacatggatggaatcaagtgagctagctagctgcaagtaacttatgtttgttttctcatgtcacagggagtatattaatgtctttgcttcggtctgaatgtgctagctagctagctagtctatgtgtgtgatgaaataattt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0343100, RefSeq:Os01g0343100