Os01g0343300

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Revision as of 04:38, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0343300| Description = Zinc finger, GATA-type domain containing protein| Version = NM_001049494.1 GI:115436401 GeneID:4326489| Length = 241...")
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Gene Name

Os01g0343300

Description

Zinc finger, GATA-type domain containing protein

Version

NM_001049494.1 GI:115436401 GeneID:4326489

Length

2418 bp

Definition

Oryza sativa Japonica Group Os01g0343300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:13713361..13715778

Sequence Coding Region

13713485..13713505,13713636..13713734,13715040..13715315

Expression

GEO Profiles:Os01g0343300

Genome Context

<gbrowseImage1> name=NC_008394:13713361..13715778 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:13713361..13715778 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggctccaccgatcggaaggtggtggggatcggcgtggcggaggaagggaggaggagctgcgtcgaatgccgcgccaccaccacgcccatgtggcgcagcggcccgaccggccccaggtctctatgcaacgcttgcggaatccggtaccggaagaagaggaggcaggatcttgggctggacctgaaccagccacagaagcaggagcatggtgaggtaatacctgaagtaaaagacagtaacagcaacagcaacaactgcaacagtgggagtggaaatagcagcagcaacttgcaggttgttccgaaaaggaggcttctgatgggtgtggaggaggctgcattgttgctaatgacattgtcgtccccatctgcatccacattgctacatggctga</cdnaseq>

Protein Sequence

<aaseq>MGSTDRKVVGIGVAEEGRRSCVECRATTTPMWRSGPTGPRSLCN ACGIRYRKKRRQDLGLDLNQPQKQEHGEVIPEVKDSNSNSNNCNSGSGNSSSNLQVVP KRRLLMGVEEAALLLMTLSSPSASTLLHG</aaseq>

Gene Sequence

<dnaseqindica>125..145#276..374#1680..1955#tcctccacaactactctctcctcctcctcctcctctactacacgcttcatcaacaacacagaagcaagaactagagaaaaaatacgaacgattctcttctccaaccaacgctgtgttaatccggatgggctccaccgatcggaaggtgcgtgcgtgcgcgcgtgcggctctctccgttgtttccctagcttgtgtaatctgagttttgggtttgtgtgttctgggctcgatcaatttctcgttcaattttttcttggttggtgatcatcatgtaggtggtggggatcggcgtggcggaggaagggaggaggagctgcgtcgaatgccgcgccaccaccacgcccatgtggcgcagcggcccgaccggccccagggtgagttcttgatcgatcgatcgatcgatcgcttcccttggctttcctcttcggttactgtgttcatcatcgttatgatcagagtcaggcagattgattgattggggattaattctggactgccgatcgattacatgatcatgacgtagtagttgtacttgtatatacatgcatattaatttttatctctgctcttgtggtgcaaatgattgttccgtttgttcgtgtcatgctgtcaatctgtgctacatggtcgatcatctcatctattagtaacttttactttgtcctagcgaagttttgatccattaaatatggatgtttagggacgtcatgatctttattttgtggatttttatcaggtatttatttatttatttatttttttgactaacaggtatttattttctttagtgcaatctgttctaatcgggaaatgctaatcttttttctgtattttggtaaaaaataattagcagatgcttttagagaatgctaaactgatttttggtgcacttgagtagtaccgctaagattctaatgttggatgatccaatggaaacatatatgagctgcaaagaccgagtcaaagaggctatcttgtgcccttcactttaatcatagacagctagagaactaagtacattgcattaggagaaagttcctaccacattccaccatatgtccatatctaacctgcccctggccttcagtttgtttagcttcttaatcaatgcgctgtcaacaagatcattagcgcaaacacgctttcgaaagtttcctcaagtccccttttagtggcacaatgatatatatacttgaaatagactccgagaaaatatcaagttttctgttgacagtctgtgcttacttgatgtcttgttggatttaggcatttagcacagggggtggtggtgacctcttgttttggtccaatctatcatgactaatcttgttgacatttctctccattcagctgggttgcaacttgttggttagttgagctgttccttgcaacagagctaaccaccaaaccaattgtgtacatggagagagagagagagagagagatgctttatccatttcgattctctaattggaatatttttcatttccacccttaatgttttcctcaattccatcccgtagcaacattaggcacaaaagcacgtgtagcactaaggaaataaagtaactagatagccaataattggcagaaaggtgattcttaatgttatcccttttgcaataataaattcagatgcgtcgatccgttgatccttatttttcaatttcttatcgcagtctctatgcaacgcttgcggaatccggtaccggaagaagaggaggcaggatcttgggctggacctgaaccagccacagaagcaggagcatggtgaggtaatacctgaagtaaaagacagtaacagcaacagcaacaactgcaacagtgggagtggaaatagcagcagcaacttgcaggttgttccgaaaaggaggcttctgatgggtgtggaggaggctgcattgttgctaatgacattgtcgtccccatctgcatccacattgctacatggctgacaatatcctgctcacccccaatcgccaaatgtacatagtacatactacatacaaagcacacaccaccaatggttccagatcatacaggtttcttggtttatcaggatgagataggggaggggccctatctgaagaagatgatgatgatgggataatgtgagggatggatttgtggcgatctgatgactccgtctgctccttctccgtgccgctgtatcgtagataaattgatcatgtcgaccttatctgtttgtgattgtggtaggatccatatgatcagaggtccgttgatctcactcacacccttctttttttgtccttttattttttatttccttcttttttgttcttcgaatatgtacatcgatgttgccccctgtgagggaatgatggtcagaaggagacatcgttcctcttcattctgaaataaaagtgaaagtaataaagaatttatttgttcatc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0343300, RefSeq:Os01g0343300