Os10g0483500

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Revision as of 08:42, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0483500| Description = FAD linked oxidase, N-terminal domain containing protein| Version = NM_001071421.1 GI:115482585 GeneID:4348932| Leng...")
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Gene Name

Os10g0483500

Description

FAD linked oxidase, N-terminal domain containing protein

Version

NM_001071421.1 GI:115482585 GeneID:4348932

Length

4196 bp

Definition

Oryza sativa Japonica Group Os10g0483500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:18727529..18731724

Sequence Coding Region

18727809..18728382,18728563..18728690,18728816..18729076,18729156..18729418,18731044..18731401

Expression

GEO Profiles:Os10g0483500

Genome Context

<gbrowseImage1> name=NC_008403:18727529..18731724 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:18727529..18731724 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggttgccatggtctgcacaagagttaacctgctcatcctcatcctttctctctgctccccatacaagtttatacagagccccatggactttggccctttgaacctccttcccaccaccaccactgcatccagtgactttggtagaatcctcttccactccccatctgcagttctaaagccccaagctccaagggatatatccctgcttctcagcttcctctctgcctcacctcttggcaaggtgacggtggcagccaggggagcaggtcactccatccatggacaggcacaggcccttgatggcattgtagtggagatgagctccttgccttctgagattgaattctacagaagaggagaaggagatgtttcttatgctgatgtgggtggtggaatcatgtggattgagcttctggagcagagcttgaagcttgggctggctccaaggtcttggactgattacctctatctcaccattggtggaaccttgtccaatgctggcatcagtgggcagacattcaagcatggacctcagattagcaatgttctacagctggaagtagtcacaggcaggggtgagattgtgacctgttcacccaccaaggatgcagagctattcaatgctgttcttggaggccttgggcagttcggcatcattactagggcaaggatcctgctgcaggaagctccacagaaagtgaagtgggttagagccttctatgatgatttcgccaccttcaccaaagaccaggagttgctggtgtcaatgccggttttggtggactatgtggaaggtttcatcgtgttgaatgagcaatcccttcacagctcctccattgccttccctacaaatgttgacttcaacccagattttggcaccaagaacaaccctaagatctactactgcatagagtttgctgtccacgattaccagaacaagaacatcaatgtggaacaggtcgtggaagtcatctcaaggcagatgagccacatagcatcccacttgtatagcgtggaggtgtcctactttgattttctcaacagggttaggatggaggagatgagccttaggaacagtgggctctgggaggtgcaccatccatggttgaacatgttcgtgccaagcgctgggattagtgacttcagggacctgctcatggacagcatctcaccggataacttcgagggcctcatcctcatctacccactcctcagacacaagtgggacaccaacacgtcggtcgtgttaccggactccgggtcgacggaccaggtgatgtacgcggtgggcatcctccggtcggcgaaccccgacgacgggtgctcccaccactgcctccaggagctcctcctccgccaccgccgcctcgccggcgccgccgcgtcgggcctcggcgcgaagcagtacctcgcccaccacccgaccccggccggctggcgccgccacttcggccggcggtgggagcggttcgccgatcgcaaggcccggttcgacccgaggtgcatcctcgggccaggccagggtatattccccagggacagcagcagcagcaatggcgcatttgcaagctatagctga</cdnaseq>

Protein Sequence

<aaseq>MEVAMVCTRVNLLILILSLCSPYKFIQSPMDFGPLNLLPTTTTA SSDFGRILFHSPSAVLKPQAPRDISLLLSFLSASPLGKVTVAARGAGHSIHGQAQALD GIVVEMSSLPSEIEFYRRGEGDVSYADVGGGIMWIELLEQSLKLGLAPRSWTDYLYLT IGGTLSNAGISGQTFKHGPQISNVLQLEVVTGRGEIVTCSPTKDAELFNAVLGGLGQF GIITRARILLQEAPQKVKWVRAFYDDFATFTKDQELLVSMPVLVDYVEGFIVLNEQSL HSSSIAFPTNVDFNPDFGTKNNPKIYYCIEFAVHDYQNKNINVEQVVEVISRQMSHIA SHLYSVEVSYFDFLNRVRMEEMSLRNSGLWEVHHPWLNMFVPSAGISDFRDLLMDSIS PDNFEGLILIYPLLRHKWDTNTSVVLPDSGSTDQVMYAVGILRSANPDDGCSHHCLQE LLLRHRRLAGAAASGLGAKQYLAHHPTPAGWRRHFGRRWERFADRKARFDPRCILGPG QGIFPRDSSSSNGAFASYS</aaseq>

Gene Sequence

<dnaseqindica>281..854#1035..1162#1288..1548#1628..1890#3516..3873#aaaacctcatagcctcatcagctgatcactgagtgccttctccttctcctcctcctttaagaaccctcttccctgcccatccttttcttcatcccctcaactttgcctaaaaggcaagaacaaagccatatgattctctgatcccttcttccaagctgcatcccaacacaacacattgtggtgacacagcaaacataatatacacacatcctcttcttcttctaccaccctccatattcctgcaagaaacaactggaggaagaatcactactccaacaccatggaggttgccatggtctgcacaagagttaacctgctcatcctcatcctttctctctgctccccatacaagtttatacagagccccatggactttggccctttgaacctccttcccaccaccaccactgcatccagtgactttggtagaatcctcttccactccccatctgcagttctaaagccccaagctccaagggatatatccctgcttctcagcttcctctctgcctcacctcttggcaaggtgacggtggcagccaggggagcaggtcactccatccatggacaggcacaggcccttgatggcattgtagtggagatgagctccttgccttctgagattgaattctacagaagaggagaaggagatgtttcttatgctgatgtgggtggtggaatcatgtggattgagcttctggagcagagcttgaagcttgggctggctccaaggtcttggactgattacctctatctcaccattggtggaaccttgtccaatgctggcatcagtgggcagacattcaagcatggacctcagattagcaatgttctacagctggaagtagtcacaggtgagagatgcataatgaaacattaaaaaatattgataaggtcttatatttgcccctctctctctctctctctctctctctctctctctctctctctctctctctttctctcaacgtctttcttgcccaacgtcttttaactgatgggcagtagattttctgttcctctttgcttgacaggcaggggtgagattgtgacctgttcacccaccaaggatgcagagctattcaatgctgttcttggaggccttgggcagttcggcatcattactagggcaaggatcctgctgcaggaagctccacagaaagtatgcagctttagaactgtcctttgcatattagtatattattatatgatcttaaccattatttctgcatgtcatgtttctgacacgcatatatataattaaacaaatctggaatttcattttaggtgaagtgggttagagccttctatgatgatttcgccaccttcaccaaagaccaggagttgctggtgtcaatgccggttttggtggactatgtggaaggtttcatcgtgttgaatgagcaatcccttcacagctcctccattgccttccctacaaatgttgacttcaacccagattttggcaccaagaacaaccctaagatctactactgcatagagtttgctgtccacgattaccagaacaagaacatcaatgtggaacaggtaagctccaaaatttactctgctttttgtgaacttatcaagtcatggtaatgatcaaacaagtcttcatctatttcaggtcgtggaagtcatctcaaggcagatgagccacatagcatcccacttgtatagcgtggaggtgtcctactttgattttctcaacagggttaggatggaggagatgagccttaggaacagtgggctctgggaggtgcaccatccatggttgaacatgttcgtgccaagcgctgggattagtgacttcagggacctgctcatggacagcatctcaccggataacttcgagggcctcatcctcatctacccactcctcagacacaagtaagcagtactgcccactaatgctaaataggcttcacattatgatatgccaacatgagggcacagcaatgcgtggaagcattatttgtgagaaaaaggttatctattggttatttaattgatctctctttcatgatcagcaacattagctgccaagcagtcctagtaggacaagtacttgtctgcattatccaacgtggtgcccctttgtgttatagtattagtcccttttggcattaatatgttggtccattttttttcaattttacaactgcccagtgtagaagatatttacatgcctgattaggttaatatttcagtgtggggcgtctttttgctcttctttggaaacatatgttgctcttttcatagcatttatgatttgagtgtgttctcatcgattctgtaaatgttaatgtcatctatttatgatttggtagcatccagctatttatgatatcaggaagagagcctttctttttaataaatgatgtttgatttatccttctgcctagtcccacttaggttctaaagccctagtatcattacttcatcagtattctcttgttggtcccgcttaggtctgttcttgtggtaagaagtaaagcttctgcttttcacatattaagagggctggggcctgagggggatccattcttgcctaggctttcagcgcggcagataagtttcaggcttgcttcatccaaacgttggacacaagaatgggaatatgcgataagttaggcagttagtttgtctaatgctgtggcagcttatttttgttggaaagttacatgtttgcataaaataattttttggtcgaaagtccacacctacatggctacagcgactttatttgtagactgttgcttgattacgaattgtatcatgttttatgggtccctcaaaatagaatgccagttatcatcagcatattatgattcaactgaagcaatagcttaatcagtggcatcctacttttcagagtagtttggtcacctttgttcagtagcaacagtgaatatagaaacagaagttgcttgatctctcttacattttagttttttgacttcaatgaaaagcataccgatactttggcttgtttgtgcttagataaatatgcttattccagcccatgataaataattatctaggtcaaatggaactaatgttgactatcggcaaactatttgttgtgatgttgacaaggcacaaattctgtgcggtgttaaaaatcaaacaagttttatgatctcattgacctcagatgaaagaatttgtaatgtgatcctccttccaagaagtttatacaagtttatctgcaaggggggtttaaaactactcttggtggcaggcagagtcagctctaatcttgttgaaccaatgaaccttaacaaaagattcatgttcactgtactgaaataatttaacagcaccaatgtggacttcactcccccaaacactaaaacaaacctctcttgagtcagaatacactgaactagtactgaatgtcagctatattatcttgtactgctcatttttttttcatttctaataattctgatactctgttagatgctgggatatcatctaattgttgcactatttatgcctctcactgacaggtgggacaccaacacgtcggtcgtgttaccggactccgggtcgacggaccaggtgatgtacgcggtgggcatcctccggtcggcgaaccccgacgacgggtgctcccaccactgcctccaggagctcctcctccgccaccgccgcctcgccggcgccgccgcgtcgggcctcggcgcgaagcagtacctcgcccaccacccgaccccggccggctggcgccgccacttcggccggcggtgggagcggttcgccgatcgcaaggcccggttcgacccgaggtgcatcctcgggccaggccagggtatattccccagggacagcagcagcagcaatggcgcatttgcaagctatagctgacacgagaaagtgcagtgtagtgctgtgctgtgccgtgccgtgccgtgccgtgacagctggtggtacaataagagggggacataggataggcaggcgaggctaggagggagatcttgttctttcttttcgatagctttcttttctgcttcgatttgaggccggcatcgttttggttggttgatgtggttgggcgggggttgattttgaacggatcctcggtggtggtgatcaccatcatcactgggaattttggaactttgtacaggctgaggaagcaagaacagctctagggcgaaaggatagtgatagcgattctatttcga</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0483500, RefSeq:Os10g0483500