Os01g0347200

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Revision as of 04:38, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0347200| Description = Conserved hypothetical protein| Version = NM_001049503.1 GI:115436419 GeneID:4326498| Length = 2296 bp| Definition ...")
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Gene Name

Os01g0347200

Description

Conserved hypothetical protein

Version

NM_001049503.1 GI:115436419 GeneID:4326498

Length

2296 bp

Definition

Oryza sativa Japonica Group Os01g0347200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:13950184..13952479

Sequence Coding Region

13950581..13951957,13952196..13952303

Expression

GEO Profiles:Os01g0347200

Genome Context

<gbrowseImage1> name=NC_008394:13950184..13952479 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:13950184..13952479 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaggcactcagcgtgcccgagatatcgtcgtcaaaaaaattgagcgatgaagtcactcaatcttctgaagccagagaggaagagagcgacgaggacatgaaagagccaattacaagattgttcgtgcatggtttcctgtcgctagtgatatcagcggtcggcaactatataattcctcttctaacaagtcacagcgagcccgagcaaacggctaaacggtccgcgatgccaatagctgttttctgtctcggcatgatcactcctgtgattggaaatggcatgcgtttccggatacttcaacccaaacagcaatatggctccggggttgcgttgcacatcaccactgcccgcatagtgctgatttcttacgtgttcctgctcctgattaacacaaggtatatcagcctcgccgtgttcccagctatcatgattgtgttcatcggcgctctgtgccgcaagttctgggtagaagaaacctgcaggaggcaacttcgacatgattcccccggtgcttccaaagctagcagcgtcttgcgtaaatctgaagagcagctgacgctgatcgtagcggtgctaccgttttggctgcagctacccggcgtgatgcttgcccgaggaacctggcagcaagatcgtgttttggtctctcatttcctggtgttcatcagctccgctatggttgctctggcgacactaatcgcccgcacggtgccagccgggatctatcctggcgtatcacgcgtgttgccagtgatgcacaggacatgcatcgccctcattctagtgtcggtgcacaccatggccggagaatggtttgggacgaagagcatggcgctagcctgcacgccggagcttgtcgccctgctcatatggttctccgttcacctcaaccatgcccacgatgcccgtgcgtgcaaaatcatttgcctcttcgcggtttccttgctgtgggcatgggcggctacatatgatgagatgacgatcctgcagggttattggagaagtagtttttggggcatctcaggcttgtcagggggactgtgctacttcagctcgtggatcttgaagcaatggccaaaagatagcttcaggcctaccactgatcaccatgcatcgcttctgctgcagctgctccgaatttctgcagaaatttccttattcacatcagttccaagtattgccttgcaacttcctcgttgggtgagccgaatttctgcgcaaattcgcttattcgcatcagttctcactactgccttgcaacttggtcttttggttcccatcatatacgtgttgttgaagagtgtcgcggtgataatgttctatgtactgatatattgcgtgtgtttccttccactgatcggcgtcgagtaccgtccaggcatgagtgtcaacagacgcaaggcctccatatccatacaactgcgaccgattatgctgttagtactgctgagcatactgatatctcacttcacgggcagatga</cdnaseq>

Protein Sequence

<aaseq>MKALSVPEISSSKKLSDEVTQSSEAREEESDEDMKEPITRLFVH GFLSLVISAVGNYIIPLLTSHSEPEQTAKRSAMPIAVFCLGMITPVIGNGMRFRILQP KQQYGSGVALHITTARIVLISYVFLLLINTRYISLAVFPAIMIVFIGALCRKFWVEET CRRQLRHDSPGASKASSVLRKSEEQLTLIVAVLPFWLQLPGVMLARGTWQQDRVLVSH FLVFISSAMVALATLIARTVPAGIYPGVSRVLPVMHRTCIALILVSVHTMAGEWFGTK SMALACTPELVALLIWFSVHLNHAHDARACKIICLFAVSLLWAWAATYDEMTILQGYW RSSFWGISGLSGGLCYFSSWILKQWPKDSFRPTTDHHASLLLQLLRISAEISLFTSVP SIALQLPRWVSRISAQIRLFASVLTTALQLGLLVPIIYVLLKSVAVIMFYVLIYCVCF LPLIGVEYRPGMSVNRRKASISIQLRPIMLLVLLSILISHFTGR</aaseq>

Gene Sequence

<dnaseqindica>523..1899#177..284#agatcaaaccatgagcaggtacaggttcttcaaatggacatggtgaggacaattcaagcttgaagcttcccatctcttcgtttttcttctttcatccctcaccccaaccaacgcactaatatgcgctcgaaagatcacacaaccaaaaaccaaaaacagcggatctatagagaggaatgaaggcactcagcgtgcccgagatatcgtcgtcaaaaaaattgagcgatgaagtcactcaatcttctgaagccagagaggaagagagcgacgaggacatgaaagaggtaatagattcaaggcaaattcaggtccttgttcagatcctcatttgttctcagatctggtccttattcagtagcagctaggagcctaggagcagtttttaggacagtgagcaactttcgtcataatcatatatacgctctgtgacctcaagtgattcaagcgaatttatatacagtttatcttaggggtcatttttactgacgaatttcttttgtttgtttttctgcttgaatcaagccaattacaagattgttcgtgcatggtttcctgtcgctagtgatatcagcggtcggcaactatataattcctcttctaacaagtcacagcgagcccgagcaaacggctaaacggtccgcgatgccaatagctgttttctgtctcggcatgatcactcctgtgattggaaatggcatgcgtttccggatacttcaacccaaacagcaatatggctccggggttgcgttgcacatcaccactgcccgcatagtgctgatttcttacgtgttcctgctcctgattaacacaaggtatatcagcctcgccgtgttcccagctatcatgattgtgttcatcggcgctctgtgccgcaagttctgggtagaagaaacctgcaggaggcaacttcgacatgattcccccggtgcttccaaagctagcagcgtcttgcgtaaatctgaagagcagctgacgctgatcgtagcggtgctaccgttttggctgcagctacccggcgtgatgcttgcccgaggaacctggcagcaagatcgtgttttggtctctcatttcctggtgttcatcagctccgctatggttgctctggcgacactaatcgcccgcacggtgccagccgggatctatcctggcgtatcacgcgtgttgccagtgatgcacaggacatgcatcgccctcattctagtgtcggtgcacaccatggccggagaatggtttgggacgaagagcatggcgctagcctgcacgccggagcttgtcgccctgctcatatggttctccgttcacctcaaccatgcccacgatgcccgtgcgtgcaaaatcatttgcctcttcgcggtttccttgctgtgggcatgggcggctacatatgatgagatgacgatcctgcagggttattggagaagtagtttttggggcatctcaggcttgtcagggggactgtgctacttcagctcgtggatcttgaagcaatggccaaaagatagcttcaggcctaccactgatcaccatgcatcgcttctgctgcagctgctccgaatttctgcagaaatttccttattcacatcagttccaagtattgccttgcaacttcctcgttgggtgagccgaatttctgcgcaaattcgcttattcgcatcagttctcactactgccttgcaacttggtcttttggttcccatcatatacgtgttgttgaagagtgtcgcggtgataatgttctatgtactgatatattgcgtgtgtttccttccactgatcggcgtcgagtaccgtccaggcatgagtgtcaacagacgcaaggcctccatatccatacaactgcgaccgattatgctgttagtactgctgagcatactgatatctcacttcacgggcagatgaaactctaagaaaaaatggttcaagagcaagtgccagatgacaaatagtaagcgtgcacaatattgtcacctgttacagcttaaaggttggcacgcttaccgccgaattaactgactttgtaaattttgttttttcgatggtttaatttgtactggtagcaagtattatattcctggttaaaatgatatgagaggcattatagtctcggctaattgtacttgatttggagaccattcgccagaattaccaaatattcttggcacagggtaattttattgagaagacaccggggtgtatcacattttctaatgtaaaactcttctagatactaccttgaaatactttctttaaggattgtaaaatttctccttagcatatgtgagctctcatatattct</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0347200, RefSeq:Os01g0347200