Os01g0348600

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Revision as of 04:39, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0348600| Description = Similar to MFP2 (Fatty acid multifunctional protein) (AtMFP2)| Version = NM_001049508.1 GI:115436429 GeneID:4326503| ...")
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Gene Name

Os01g0348600

Description

Similar to MFP2 (Fatty acid multifunctional protein) (AtMFP2)

Version

NM_001049508.1 GI:115436429 GeneID:4326503

Length

5877 bp

Definition

Oryza sativa Japonica Group Os01g0348600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:14029931..14035807

Sequence Coding Region

14030144..14030252,14031186..14031257,14031383..14031448,14031547..14031603,14031697..14031764
,14031848..14031929,14032225..14032280,14032425..14032727,14032822..14032908
,14032979..14033153,14033261..14033382,14033469..14033632,14033705..14033959
,14034092..14034213,14034322..14034443,14034891..14035039,14035126..14035264
,14035495..14035530

Expression

GEO Profiles:Os01g0348600

Genome Context

<gbrowseImage1> name=NC_008394:14029931..14035807 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:14029931..14035807 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgcggcggcggcggcgaaggggaggacggagatggaggtcggagcggacggcgtcgccgtcatcaccatctgcaacccgcccgtcaactcgctctccatcgatgtattgctaagcttaaaggaaaactatgctgaagctcttcggaggaatgatgtgaaagctattgttgttacagggaaaggaggaaaattttctggaggatttgatattagttcctttggtagtgttcagggtggcaaagttgaacagccaaaggttggttacatatcaatagatattatcactgataccctagaagctgcaacaaagccatcagtggctgcaattgatggtcttgctcttggtggaggattggaagttgctatggcatgccatgcacgcatttcaactcccacagctcaattaggacttccagaacttcaacttggagttattccaggatttggaggaacacaacgactcccgcgtcttgttggattgacaaaagcacttgaaatgatgctgctatctaagccaattaagggtgcagaggcacaccaattgggtcttgttgattccttggtttctgctgatgatttggttaatactgctcgtcgttgggctttggatatctgtgaattaaaaaggccatggatcaaaagtctttataagactgacaaactagaaccacttggtgaggctagggagattctcaagtttgcaagagctcaagctcgaaggcaggctgccaatcttgagcatccgcttgtttgtattgatgtcattgaagaaggtattgtttcgggaccccgagctgggctctggaaggaagcaaatgctttccagggtcttcttttcgcggatacatgtaaaaacttagttcatgtattcttttctcaacgggcaacatcaaaggttcctggtgctacagacttgggattgatgcctaggaaagttactaaagttgccattctaggtggtggacttatgggttcaggaattgcaactgcgatgatactgagtaattatcctgttatactcaaagaagtaaatgagaagtttctaaatgctggaattgacagaattaaagccaatttgcagagtcgtgtgaggaaagggaaaatgacagaggagagatatgagaaagccatgtctcttgtaacaggtgtcctcgattatgaaaggttcaaagacgtggatttagttattgaggctgttattgaaaatgtgaaattgaaacagcaaatattttctgacttggagaagtactgtccttcccattgtgtccttgctactaatacatctacaattgatcttaatctaattggtgagaaaacaaggtccaaagaccgtattgtcggtgcacacttctttagccctgcacatgtcatgccacttctggaaatagtccgcacccagcacacctcaccacaagttgtcgttgatttgcttgatgttgggaagaaaatcaagaagacaccaatagtggttgggaactgtaccggtttcgcagtcaacagaatgttctttccttacactcagtcagcactcctgttcgttgatcttggtatggatgtgtacaagatcgatcgtgcatgtaccaaatttggaatgcccatgggtccattcagactggcagacctcgttggttttggtgttgctgcggccactggtatgcagtaccttgagaacttcccagagagggtctacaagtcaatgttgattcctcttatgatggaggacaaaaggacaggtgaggcctctcggaagggcttttacaagtatgaggacaagaggaaggcaactcctgatcccgaaattatgaaatatattgaaaaatctaggagtatggctggagtaacaccagacactgagttgatgaagctaagtgagaaggacatagttgagatggtcttcttcccagtcataaatgaggcttgccgtgttcttgatgagggaattgcagtcaaggcttctgaccttgacattgcctcaatctttggcatgggattcccaccgtataggggaggaatcatgttctgggcagattccattggtgcaaagtacatccatgacaagttggaggtgtgggcgaagcggtatagcgacatcttcaagccttgttcctaccttgcagaaagagcagcaaatggggttcctctgagtgcaccagctaagcaagtcaaggcccgactatag</cdnaseq>

Protein Sequence

<aaseq>MAAAAAAKGRTEMEVGADGVAVITICNPPVNSLSIDVLLSLKEN YAEALRRNDVKAIVVTGKGGKFSGGFDISSFGSVQGGKVEQPKVGYISIDIITDTLEA ATKPSVAAIDGLALGGGLEVAMACHARISTPTAQLGLPELQLGVIPGFGGTQRLPRLV GLTKALEMMLLSKPIKGAEAHQLGLVDSLVSADDLVNTARRWALDICELKRPWIKSLY KTDKLEPLGEAREILKFARAQARRQAANLEHPLVCIDVIEEGIVSGPRAGLWKEANAF QGLLFADTCKNLVHVFFSQRATSKVPGATDLGLMPRKVTKVAILGGGLMGSGIATAMI LSNYPVILKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKAMSLVTGVLDYERFK DVDLVIEAVIENVKLKQQIFSDLEKYCPSHCVLATNTSTIDLNLIGEKTRSKDRIVGA HFFSPAHVMPLLEIVRTQHTSPQVVVDLLDVGKKIKKTPIVVGNCTGFAVNRMFFPYT QSALLFVDLGMDVYKIDRACTKFGMPMGPFRLADLVGFGVAAATGMQYLENFPERVYK SMLIPLMMEDKRTGEASRKGFYKYEDKRKATPDPEIMKYIEKSRSMAGVTPDTELMKL SEKDIVEMVFFPVINEACRVLDEGIAVKASDLDIASIFGMGFPPYRGGIMFWADSIGA KYIHDKLEVWAKRYSDIFKPCSYLAERAANGVPLSAPAKQVKARL</aaseq>

Gene Sequence

<dnaseqindica>214..322#1256..1327#1453..1518#1617..1673#1767..1834#1918..1999#2295..2350#2495..2797#2892..2978#3049..3223#3331..3452#3539..3702#3775..4029#4162..4283#4392..4513#4961..5109#5196..5334#5565..5600#gatgaggagatgggatggatcgcgtcgcgctctcgtcagcgcggcaaccacctcttgggggggtcgcgctataaatcgttggtcggagacggagatagacatcgcttgcaagctcccaactccttctagcgagaaagcaacagcggaggagccaaacgcgagatctttggaggctccgccggagcggggaaccgacagattagcggaggagagatggccgcggcggcggcggcgaaggggaggacggagatggaggtcggagcggacggcgtcgccgtcatcaccatctgcaacccgcccgtcaactcgctctccatcgatggtacacgctatcttctttctctcgtcgtttgtctcctttcgtttgtttctgggattggggaagggttgcggggtagggttctctgactggagagtgggggaattttgagagctgggaggtggagaggtgtctctcgagaattatgtgattgtggcgctggggattgtgggttggggctcaattctgcttccatgagctgtctgattggtgattggggatagtgtggggatgcagcttgatgcccagatgtctaattcttcctttttaactgtattttttttggtagatctttaccaaataaactgtatttttggtagaattggatgggagatctcgaagttctgtacagtttgggtgtcctaagcaatacttcgattttggggttgtatacattgatgctattactttgaaatttctccttcggcagtttgaaacccaaaaagatttggctgctttacagggtggtttgcccattggtgtgatcttactgtatcttgccataactgtgttgctgtcaactatttcttgttgtaacttgctattattaaatgatggaacttactgcctaaacttactatcggcaaaatattactgattatgcttttgctgaaccagttgtattacatacatggagtcgaaagtacaatacaacatttgtggcatatacaccattctgaagtagtacagcagtcgcttgcaacttgaagtgcaaaataatgccattgttgaataatacagttgcatcttcctcatctttagacataataatgtgtaggataccattggtttcatttagataatgactattctgaataatacgcatgcccttagtttaaattgaggagttaacagtacacttctaaatattgagtaccgcattagtatcaaatcctttatccatctttgttttcaccatgacttttgctcttgcagtattgctaagcttaaaggaaaactatgctgaagctcttcggaggaatgatgtgaaagctattgttgttacaggtacttgtcattttattcatttaggaattatatattctactgttaaagtcatggccgatttttgtgcattctgcgaaggattcactattcttttcagtgacatttttttttctaaattatgacagggaaaggaggaaaattttctggaggatttgatattagttcctttggtagtgttcagggtggcaaaggtatgtcatacttctcaaatctgtgatactgttcttactgtatggtgaattctctatccattctacagatctcattataccttaaactttttcaacagttgaacagccaaaggttggttacatatcaatagatattatcactgataccctagaaggtaattgattcgtttgcaccctctatgaactatgattgcttttcctattgaaggattgtgttgagagtttttcatatatgttgtcttaaacagctgcaacaaagccatcagtggctgcaattgatggtcttgctcttggtggaggattggaagttgctatggtacttgtttgttttatcctggttattatctttgatatttcagaggcaataacttctttggtaatccttgtatgttcaattaggcatgccatgcacgcatttcaactcccacagctcaattaggacttccagaacttcaacttggagttattccaggatttggaggtaattctaaacttcaacttctatttggtgtcaatgattcaatattcttatatgctggaaattggctcccaaaatactctatcctattagtttatggcactggctcccaaaatactctatcctattagttttatggcactgtaattgcttgaagtgatatttgtatttttgttgtcactccagttatgatttcaaattattattatgccatgagcatttccttcaatatgaaggggatgaatacacatgctgctttcttaaattccatgggattgactttattcaattttcttaggaacacaacgactcccgcgtcttgttggattgacaaaagcacttgaaatgatgctggtaaatactgcttcatctttgcttcttgatgctatggttctctccctttttttatttttgcagggagaggctatggtttttctgttttgtgatattccctgtttcatacctgattcatttaattaattatgccatttgtatcagctatctaagccaattaagggtgcagaggcacaccaattgggtcttgttgattccttggtttctgctgatgatttggttaatactgctcgtcgttgggctttggatatctgtgaattaaaaaggccatggatcaaaagtctttataagactgacaaactagaaccacttggtgaggctagggagattctcaagtttgcaagagctcaagctcgaaggcaggctgccaatcttgagcatccgcttgtttgtattgatgtcattgaagaaggtattgtttcgggaccccgagctgggctctggaaggtacttgatgctacttgtgttattccttccttattcacgtattttcgtgatgtacacagcttgtacgcaattcatttccctaatgcaaatgcaggaagcaaatgctttccagggtcttcttttcgcggatacatgtaaaaacttagttcatgtattcttttctcaacgggcaacatcaaaggtgtgagaacattttgtcaattgttaatatagaaccatttcttgttctaatcctctctcgaatacaacaggttcctggtgctacagacttgggattgatgcctaggaaagttactaaagttgccattctaggtggtggacttatgggttcaggaattgcaactgcgatgatactgagtaattatcctgttatactcaaagaagtaaatgagaagtttctaaatgctggaattgacagaattaaaggtaaaaacacctcatctcatatcatcctttatatttgtgggtgattatctaacacattaacatctgtgcaacaaaagataaactgcctcactagtttgtttgatcagccaatttgcagagtcgtgtgaggaaagggaaaatgacagaggagagatatgagaaagccatgtctcttgtaacaggtgtcctcgattatgaaaggttcaaagacgtggatttagttattgaggtagctctttatccttaattatttggtcaaaactatgtgtcttttgttggtcagcccatttatcattgttctattgttcgttgcaggctgttattgaaaatgtgaaattgaaacagcaaatattttctgacttggagaagtactgtccttcccattgtgtccttgctactaatacatctacaattgatcttaatctaattggtgagaaaacaaggtccaaagaccgtattgtcggtgcacacttctttaggtaatgcagtgtttatggattaacagatctttttagtcacatgatcctccactaactgattgctcttcacagccctgcacatgtcatgccacttctggaaatagtccgcacccagcacacctcaccacaagttgtcgttgatttgcttgatgttgggaagaaaatcaagaagacaccaatagtggttgggaactgtaccggtttcgcagtcaacagaatgttctttccttacactcagtcagcactcctgttcgttgatcttggtatggatgtgtacaagatcgatcgtgcatgtaccaaatttggaatgcccatgggtccattcaggtcagatgtattatttggttttgtttttgtgaatatgatttgtgcagcatcattaatgtttttatatgaatgtgtatgagccatgtcaggtggactcaatacgaatacctcttttgtgttacttgaatgcagactggcagacctcgttggttttggtgttgctgcggccactggtatgcagtaccttgagaacttcccagagagggtctacaagtcaatgttgattcctcttatgatggaggacaaaaggacaggtaaaaattaatcagcaactgtccatgtatcacgtctatttttctcttcgccatttatttatgctggatttgttcatacgcgtacacaatcgggcaactttcacacaggtgaggcctctcggaagggcttttacaagtatgaggacaagaggaaggcaactcctgatcccgaaattatgaaatatattgaaaaatctaggagtatggctggagtaacaccagacactgaggtttggtttcgccttctgagttttcccactctctttacttccctagagaaatctacatctcattcaaaatcatttgtagcaataaaatcactttgtgggtggtgcttggtaaattaataattcaagtcttaaaccaggattgtaataactgtcgaggagagtccttatctcaaaatatggttttatgacttttgtataattattagttccttttattttatatttcaaatgtaaatgccacctgtggataaataattcaaaaaaatctgtatctttgatgtaatattactagtacctgaattagatgagctgatatagtggcacattttgacaatgatgatgatatacatgctaaattgactagactatcgtgcaacaagtgatatatttctgacaaaaggagtcagttagcatctaaattctagaacttttgtacaattataccagttgatgaagctaagtgagaaggacatagttgagatggtcttcttcccagtcataaatgaggcttgccgtgttcttgatgagggaattgcagtcaaggcttctgaccttgacattgcctcaatctttggcatgggattcccaccgtataggtacgtttatagaactagaccaatttgcaagaaataatagaatatactaataaaacttgtctactgattggtgttggtgtgatcaggggaggaatcatgttctgggcagattccattggtgcaaagtacatccatgacaagttggaggtgtgggcgaagcggtatagcgacatcttcaagccttgttcctaccttgcagaaagagcagcaaatggggttcctctggtaagcaaaatcatttaattctaggtgaaattttatatgcctattgtgtgggaactactaatgttcaagtacgcattctatattgcatacctgccatgctgccaggatgcaaaccatatgcatccagatatacagcatccatttaaattccttttatgcctttctgtcgtatgtattgtgatgatattcttgatttagcgtctgatttgtacaaaatatttcatttgcagagtgcaccagctaagcaagtcaaggcccgactatagatgaacatcctgctttcctatcaactgcggaaactatgcagaataatagaacacacgccaatggggcatttatggtctgtagaatagcccatccaataataattagaataggattcttgaagagttatgtgtaatctgtatgacgcctctccaagttcttgaaccattactgcgacagtgttttgagttcagacattctttaaaatgtttcatgtgccaatggttataagcagattgaaaaggcatacataaaaacagcgggtgttaattagtttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0348600, RefSeq:Os01g0348600