Os01g0348700

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Revision as of 04:39, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0348700| Description = Similar to 60S ribosomal protein L23a (L25)| Version = NM_001049509.1 GI:115436431 GeneID:4326469| Length = 1822 bp|...")
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Gene Name

Os01g0348700

Description

Similar to 60S ribosomal protein L23a (L25)

Version

NM_001049509.1 GI:115436431 GeneID:4326469

Length

1822 bp

Definition

Oryza sativa Japonica Group Os01g0348700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:14038958..14040779

Sequence Coding Region

14039039..14039050,14040102..14040463,14040551..14040635

Expression

GEO Profiles:Os01g0348700

Genome Context

<gbrowseImage1> name=NC_008394:14038958..14040779 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:14038958..14040779 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctcccaaggccgctgtaaagaaggctgatggaaagactcaacaagccttgaaggttgccaaggcagtgaagtctgggtcaatcaagagaaagtcaaagaagatccgcacttcggtgacatttcacagaccaaagaccctgaagaaggcgagagaccctaagtacccaagagtcagtgcacctggcaggaacaagcttgatcagtaccaaatcctcaagtacccccttacgaccgaatctgccatgaagaagattgaagacaacaacacccttgtcttcatcgtcgacctcaaggcagacaagaagaagatcaaggcagctgtcaagaagatgtatgacatccaggcaaagaaagttaacactctgatcaggcctgacggcaagaagaaggcttacgtgaagctcactccagactatgatgctcttgatgtggccaacaaaattggcatcatttaa</cdnaseq>

Protein Sequence

<aaseq>MAPKAAVKKADGKTQQALKVAKAVKSGSIKRKSKKIRTSVTFHR PKTLKKARDPKYPRVSAPGRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDLKADK KKIKAAVKKMYDIQAKKVNTLIRPDGKKKAYVKLTPDYDALDVANKIGII</aaseq>

Gene Sequence

<dnaseqindica>82..93#1145..1506#1594..1678#ctactacgaatcgccagccgccacaccgagctccgccgccgccaaccccaccgcggcgagctccgccttccgccggccgcgatggctcccaaggtttgtctgctttacattctcgcacatctacctcaaaactcaaattgcctctggattcatgtcgctgttgcgtagccgcccctctcctgcggatgtgctgttgtctagatgtagcatacgcagtagctgctcctcaaattgctttgagataatgatcatatgatgtgatgtgatgtgatgtgattgtgttagaaattgctgctgctgctgatttttagttattttccccctttcttgctgtggggggttggtggttgcggttctctgtgatgacgaaaaacagatgacgagtccgatccaatccattccattaaaccatggggacaatcgaggcatttgtctgagagaacaacagctttagttttttcttaacaaaaatattcactggttgttgatttcttcttgttttagcaatgcaatcggcatttgtggtattggcatgatgaggaaaaccgatgtttttggatctatttgatgataaattcctcctactcattctgaatgctgagaccacagtgtgtgcctttgcttgttctataggtgtttagacagtagctttttttaatcttgtacatggaagctgcaagcaatctatgcttttcattcagttataaaattgattttgtttgacaaaattggtctatttttctaatcaaataaagtggctttgtgcttctgatcctaaatactggaaaaatgtatgtacctttgcaatgtaagatatctagcacgggtgttcgacattgattactgatgtgataatgtatattggaagtcgtagtgatctgatttatccaaaaaatattctagcgttaagttatagttgtagtctgtcttttatagattccaatcacaatggagaataacattcttactatgggatgtatgtgctttgttcttatttctggacccctgtaataaattcctcttgcagttctgtgctgaattttacccataatatctcttcatttaattttggattacttcctaatgaccaggttaggtatttctgaactattgacaaataattgtcccttgttgaattaactaggccgctgtaaagaaggctgatggaaagactcaacaagccttgaaggttgccaaggcagtgaagtctgggtcaatcaagagaaagtcaaagaagatccgcacttcggtgacatttcacagaccaaagaccctgaagaaggcgagagaccctaagtacccaagagtcagtgcacctggcaggaacaagcttgatcagtaccaaatcctcaagtacccccttacgaccgaatctgccatgaagaagattgaagacaacaacacccttgtcttcatcgtcgacctcaaggcagacaagaagaagatcaaggcagctgtcaagaagatgtatgacatccaggcaaagaaagttaacactctgatcaggttattaactcaccttcctttgttcatggctgaatacgcttcattctgtatgttgacaacttggtgtatcgattttctgtaatacaggcctgacggcaagaagaaggcttacgtgaagctcactccagactatgatgctcttgatgtggccaacaaaattggcatcatttaagttagggcgctttttttcatcatgttgaacgtaagattttggttggctagttcttaatgttgaacagaaccttataacttgcaaaagaacatcttgagttttgttgagcgaatatcatctgtgtgagcgcacatttactgaatc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0348700, RefSeq:Os01g0348700